4.0:Information of module
stele pSHR 8h BL
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0015698 inorganic anion transport BP 6.565e-14
GO:1901700 response to oxygen-containing compound BP 7.145e-14
GO:0010167 response to nitrate BP 1.396e-13
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009628 response to abiotic stimulus BP 3.061e-08
GO:0010817 regulation of hormone levels BP 1.014e-06
GO:0009812 flavonoid metabolic process BP 1.273e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
stele pSHR 8h BL		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 AT5G24640 AT5G24640 unknown 4.986 no data
2 AT2G04050 AT2G04050 [MATE efflux family protein] 4.348 0.091
3 AT4G08620 AT4G08620 SULTR1;1, sulphate transporter 1;1 4.301 0.073
4 AT1G13710 AT1G13710 CYP78A5, cytochrome P450, family 78, subfamily A, polypeptide 5, KLU, KLUH 3.639 -0.100
5 AT1G60050 AT1G60050 UMAMIT35, Usually multiple acids move in and out Transporters 35 3.561 no data
6 AT1G18400 AT1G18400 BEE1, BR enhanced expression 1 2.772 -0.042
7 AT3G07250 AT3G07250 [nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein] 2.655 0.055
8 AT5G18910 AT5G18910 [Protein kinase superfamily protein] 2.445 0.007
9 AT3G18890 AT3G18890 AtTic62, translocon at the inner envelope membrane of chloroplasts 62, Tic62, translocon at the inner envelope membrane of chloroplasts 62 2.396 -0.158
10 AT3G28750 AT3G28750 unknown 2.330 0.013
11 AT1G15330 AT1G15330 [Cystathionine beta-synthase (CBS) protein] 2.312 -0.052
12 AT2G17680 AT2G17680 unknown 2.248 0.123
13 AT1G28160 AT1G28160 [Integrase-type DNA-binding superfamily protein] 2.219 0.120
14 AT3G19320 AT3G19320 [Leucine-rich repeat (LRR) family protein] 2.145 0.017
15 AT3G61400 AT3G61400 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 2.006 -0.184
16 AT3G48390 AT3G48390 [MA3 domain-containing protein] 1.962 no data
17 AT1G23060 AT1G23060 MDP40, MICROTUBULE DESTABILIZING PROTEIN 40 1.924 -0.092
18 AT3G46270 AT3G46270 [receptor protein kinase-related] 1.878 -0.008
19 AT4G26260 AT4G26260 MIOX4, myo-inositol oxygenase 4 1.877 0.062
20 AT5G04120 AT5G04120 [Phosphoglycerate mutase family protein] 1.780 0.082
21 AT4G28900 AT4G28900 [copia-like retrotransposon family, has a 7.7e-236 P-value blast match to GB:AAA57005 Hopscotch polyprotein (Ty1_Copia-element) (Zea mays)] 1.733 0.091
22 AT5G60810 AT5G60810 GLV11, GOLVEN 11, RGF1, root meristem growth factor 1 1.669 no data
23 AT3G56000 AT3G56000 ATCSLA14, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE A14, CSLA14, cellulose synthase like A14 1.643 -0.130
24 AT1G53700 AT1G53700 PK3AT, PROTEIN KINASE 3 ARABIDOPSIS THALIANA, WAG1, WAG 1 1.629 -0.132
25 AT5G15290 AT5G15290 CASP5, Casparian strip membrane domain protein 5 1.616 0.023
26 AT5G54790 AT5G54790 unknown 1.595 -0.150
27 AT2G39010 AT2G39010 PIP2;6, PLASMA MEMBRANE INTRINSIC PROTEIN 2;6, PIP2E, plasma membrane intrinsic protein 2E 1.587 -0.149
28 AT2G44370 AT2G44370 [Cysteine/Histidine-rich C1 domain family protein] 1.582 0.113
29 AT1G76800 AT1G76800 [Vacuolar iron transporter (VIT) family protein] 1.577 0.096
30 AT4G01430 AT4G01430 UMAMIT29, Usually multiple acids move in and out Transporters 29 1.566 0.175
31 AT1G60095 AT1G60095 [Mannose-binding lectin superfamily protein] 1.557 no data
32 AT1G14540 AT1G14540 PER4, peroxidase 4 1.534 0.422
33 AT4G29180 AT4G29180 RHS16, root hair specific 16 1.508 0.076
34 AT4G37390 AT4G37390 AUR3, AUXIN UPREGULATED 3, BRU6, GH3-2, GH3.2, YDK1, YADOKARI 1 1.492 no data
35 AT1G21525 AT1G21525 [expressed protein] 1.491 no data
36 AT2G03760 AT2G03760 AtSOT1, AtSOT12, sulphotransferase 12, ATST1, ARABIDOPSIS THALIANA SULFOTRANSFERASE 1, AtSULT202A1, RAR047, SOT12, sulphotransferase 12, ST, ST1, SULFOTRANSFERASE 1, SULT202A1, sulfotransferase 202A1 1.452 0.033
37 AT3G18200 AT3G18200 UMAMIT4, Usually multiple acids move in and out Transporters 4 1.451 -0.277
38 AT1G09932 AT1G09932 [Phosphoglycerate mutase family protein] 1.439 no data
39 AT2G05540 AT2G05540 [Glycine-rich protein family] 1.433 -0.139
40 AT4G25560 AT4G25560 AtMYB18, myb domain protein 18, LAF1, LONG AFTER FAR-RED LIGHT 1, MYB18, myb domain protein 18 1.419 0.040
41 AT5G19560 AT5G19560 ATROPGEF10, ARABIDOPSIS THALIANA ROP UANINE NUCLEOTIDE EXCHANGE FACTOR 10, GEF10, guanine exchange factor 10, ROPGEF10, ROP (rho of plants) guanine nucleotide exchange factor 10 1.407 0.031
42 AT5G49360 AT5G49360 ATBXL1, BETA-XYLOSIDASE 1, BXL1, beta-xylosidase 1 1.377 0.333
43 AT4G01390 AT4G01390 [TRAF-like family protein] 1.371 0.011
44 AT3G02000 AT3G02000 ROXY1 1.367 -0.347
45 AT1G11080 AT1G11080 scpl31, serine carboxypeptidase-like 31 1.348 -0.178
46 AT4G38400 AT4G38400 ATEXLA2, expansin-like A2, ATEXPL2, ATHEXP BETA 2.2, EXLA2, expansin-like A2, EXPL2, EXPANSIN L2 1.346 0.100
47 AT4G08950 AT4G08950 EXO, EXORDIUM 1.328 -0.063
48 AT2G39510 AT2G39510 UMAMIT14, Usually multiple acids move in and out Transporters 14 1.308 0.206
49 AT3G62320 AT3G62320 [Polynucleotidyl transferase, ribonuclease H-like superfamily protein] -4.344 -0.045
50 AT2G15780 AT2G15780 [Cupredoxin superfamily protein] -4.097 -0.128
51 AT5G38940 AT5G38940 [RmlC-like cupins superfamily protein] -3.687 no data
52 AT5G22580 AT5G22580 [Stress responsive A/B Barrel Domain] -3.662 -0.092
53 AT3G62760 AT3G62760 ATGSTF13 -3.354 -0.087
54 AT1G70680 AT1G70680 [Caleosin-related family protein] -3.136 no data
55 AT5G62210 AT5G62210 [Embryo-specific protein 3, (ATS3)] -2.952 -0.166
56 AT3G26120 AT3G26120 terminal EAR1-like 1 -2.818 0.062
57 AT4G33145 AT4G33145 unknown -2.795 no data
58 AT2G05330 AT2G05330 [BTB/POZ domain-containing protein] -2.765 no data
59 AT3G19500 AT3G19500 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -2.612 -0.006
60 AT2G46850 AT2G46850 [Protein kinase superfamily protein] -2.552 -0.255
61 AT5G24780 AT5G24780 ATVSP1, VSP1, vegetative storage protein 1 -2.452 no data
62 AT3G09120 AT3G09120 unknown -2.443 no data
63 AT5G66080 AT5G66080 APD9, Arabidopsis Pp2c clade D 9 -2.434 0.083
64 AT3G09110 AT3G09110 unknown -2.380 no data
65 AT5G57785 AT5G57785 unknown -2.343 0.103
66 AT3G15670 AT3G15670 [Late embryogenesis abundant protein (LEA) family protein] -2.311 0.021
67 AT4G09940 AT4G09940 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -2.261 -0.124
68 AT3G27950 AT3G27950 [GDSL-like Lipase/Acylhydrolase superfamily protein] -2.257 0.269
69 AT4G31380 AT4G31380 FLP1, FPF1-like protein 1 -2.186 no data
70 AT3G22120 AT3G22120 CWLP, cell wall-plasma membrane linker protein -2.008 0.279
71 AT1G74500 AT1G74500 ATBS1, activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1, bHLH135, basic helix-loop-helix protein 135, BS1, activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1, PRE3, PACLOBUTRAZOL RESISTANCE 3, TMO7, TARGET OF MONOPTEROS 7 -1.905 -0.245
72 AT5G47600 AT5G47600 [HSP20-like chaperones superfamily protein] -1.882 -0.106
73 AT3G16300 AT3G16300 [Uncharacterised protein family (UPF0497)] -1.853 no data
74 AT2G04025 AT2G04025 GLV7, GOLVEN 7, RGF3, root meristem growth factor 3 -1.815 -0.224
75 AT1G68825 AT1G68825 DVL5, DEVIL 5, RTFL15, ROTUNDIFOLIA like 15 -1.732 no data
76 AT1G05835 AT1G05835 [PHD finger protein] -1.709 no data
77 AT2G24270 AT2G24270 ALDH11A3, aldehyde dehydrogenase 11A3 -1.674 -0.106
78 AT4G33800 AT4G33800 unknown -1.603 -0.172
79 AT3G30725 AT3G30725 AtGDU6, glutamine dumper 6, GDU6, glutamine dumper 6 -1.603 no data
80 AT3G50610 AT3G50610 unknown -1.595 0.131
81 AT5G48100 AT5G48100 ATLAC15, AtTT10, LAC15, LACCASE-LIKE 15, TT10, TRANSPARENT TESTA 10 -1.558 0.013
82 AT5G38020 AT5G38020 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -1.513 -0.016
83 AT1G59940 AT1G59940 ARR3, response regulator 3 -1.503 0.041
84 AT4G28703 AT4G28703 [RmlC-like cupins superfamily protein] -1.488 -0.110
85 AT2G05510 AT2G05510 [Glycine-rich protein family] -1.474 no data
86 AT5G15725 AT5G15725 GLV9, GOLVEN 9 -1.459 -0.038
87 AT2G17080 AT2G17080 unknown -1.418 0.063
88 AT2G41990 AT2G41990 unknown -1.347 0.013
89 AT4G11190 AT4G11190 [Disease resistance-responsive (dirigent-like protein) family protein] -1.322 0.107
90 AT1G28190 AT1G28190 unknown -1.292 0.110
91 AT3G30180 AT3G30180 BR6OX2, brassinosteroid-6-oxidase 2, CYP85A2 -1.272 0.086
92 AT1G26680 AT1G26680 [transcriptional factor B3 family protein] -1.269 0.053
93 AT1G67090 AT1G67090 RBCS1A, ribulose bisphosphate carboxylase small chain 1A -1.250 no data
94 AT2G22590 AT2G22590 [UDP-Glycosyltransferase superfamily protein] -1.230 0.024
95 AT1G30530 AT1G30530 UGT78D1, UDP-glucosyl transferase 78D1 -1.165 0.077