4.0:Information of module
root cap pGL2(root cap pGL2BRI1) 3h BL
In comparison with bri1-116 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:1901698 response to nitrogen compound BP 1.500e-23
GO:0006820 anion transport BP 1.701e-19
GO:0015698 inorganic anion transport BP 3.982e-19
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042221 response to chemical BP 3.059e-19
GO:1901700 response to oxygen-containing compound BP 2.516e-16
GO:0050896 response to stimulus BP 1.035e-15
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
root cap pGL2(root cap pGL2BRI1) 3h BL		 Log2 signal ratio
bri1-116
1 AT1G66600 AT1G66600 ABO3, ABA overly sensitive mutant 3, ATWRKY63, WRKY63, WRKY DNA-binding protein 63 5.853 no data
2 AT4G11340 AT4G11340 [Disease resistance protein (TIR-NBS-LRR class) family] 4.736 -0.025
3 AT2G02010 AT2G02010 GAD4, glutamate decarboxylase 4 4.546 no data
4 AT2G25410 AT2G25410 [RING/U-box superfamily protein] 4.137 no data
5 AT3G01080 AT3G01080 ATWRKY58, WRKY DNA-BINDING PROTEIN 58, WRKY58, WRKY DNA-binding protein 58 4.054 -0.034
6 AT4G21870 AT4G21870 [HSP20-like chaperones superfamily protein] 4.046 0.054
7 AT5G05390 AT5G05390 LAC12, laccase 12 4.015 -0.038
8 AT5G24220 AT5G24220 [Lipase class 3-related protein] 4.009 no data
9 AT5G45090 AT5G45090 AtPP2-A7, phloem protein 2-A7, PP2-A7, phloem protein 2-A7 3.961 -0.047
10 AT1G33840 AT1G33840 unknown 3.935 0.040
11 AT1G57630 AT1G57630 [Toll-Interleukin-Resistance (TIR) domain family protein] 3.559 -0.059
12 AT1G44010 AT1G44010 unknown 3.543 no data
13 AT5G25260 AT5G25260 [SPFH/Band 7/PHB domain-containing membrane-associated protein family] 3.524 no data
14 AT5G44050 AT5G44050 [MATE efflux family protein] 3.438 0.065
15 AT3G03670 AT3G03670 [Peroxidase superfamily protein] 3.436 -0.070
16 AT4G04700 AT4G04700 CPK27, calcium-dependent protein kinase 27 3.384 no data
17 AT4G01010 AT4G01010 ATCNGC13, CYCLIC NUCLEOTIDE-GATED CHANNEL 13, CNGC13, cyclic nucleotide-gated channel 13 3.381 -0.063
18 AT5G48430 AT5G48430 [Eukaryotic aspartyl protease family protein] 3.369 -0.135
19 AT4G13095 AT4G13095 LCR37, low-molecular-weight cysteine-rich 37 3.338 no data
20 AT1G51913 AT1G51913 [LOCATED IN: endomembrane system] 3.303 no data
21 AT5G22555 AT5G22555 unknown 3.271 -0.016
22 AT3G50480 AT3G50480 HR4, homolog of RPW8 4 3.267 -0.015
23 AT1G26420 AT1G26420 [FAD-binding Berberine family protein] 3.247 -0.235
24 AT4G13090 AT4G13090 XTH2, xyloglucan endotransglucosylase/hydrolase 2 3.233 0.031
25 AT1G22900 AT1G22900 [Disease resistance-responsive (dirigent-like protein) family protein] 3.185 0.293
26 AT3G50460 AT3G50460 HR2, homolog of RPW8 2 3.179 no data
27 AT4G14630 AT4G14630 GLP9, germin-like protein 9 3.143 -0.146
28 AT2G37810 AT2G37810 [Cysteine/Histidine-rich C1 domain family protein] 3.064 0.002
29 AT5G54720 AT5G54720 [Ankyrin repeat family protein] 3.063 0.026
30 AT3G53770 AT3G53770 [late embryogenesis abundant 3 (LEA3) family protein] 3.057 -0.033
31 AT1G33813 AT1G33813 [copia-like retrotransposon family, has a 5.8e-39 P-value blast match to gb|AAO73529.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family)] 3.021 0.028
32 AT4G00780 AT4G00780 [TRAF-like family protein] 3.011 0.144
33 AT1G63570 AT1G63570 [Receptor-like protein kinase-related family protein] 2.990 no data
34 AT2G19190 AT2G19190 FRK1, FLG22-induced receptor-like kinase 1 2.975 0.015
35 AT1G66920 AT1G66920 [Protein kinase superfamily protein] 2.974 no data
36 AT5G19880 AT5G19880 [Peroxidase superfamily protein] 2.964 0.026
37 AT1G22890 AT1G22890 unknown 2.960 0.187
38 AT1G26250 AT1G26250 [Proline-rich extensin-like family protein] 2.924 no data
39 AT1G51920 AT1G51920 unknown 2.912 -0.065
40 AT1G65484 AT1G65484 unknown 2.906 no data
41 AT1G05880 AT1G05880 ARI12, ARIADNE 12, ATARI12, ARABIDOPSIS ARIADNE 12 2.902 -0.120
42 AT4G23170 AT4G23170 CRK9, CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 9, EP1 2.882 no data
43 AT3G24400 AT3G24400 AtPERK2, proline-rich extensin-like receptor kinase 2, PERK2, proline-rich extensin-like receptor kinase 2 2.857 0.094
44 AT5G57220 AT5G57220 CYP81F2, cytochrome P450, family 81, subfamily F, polypeptide 2 2.853 -0.177
45 AT1G63560 AT1G63560 [Receptor-like protein kinase-related family protein] 2.845 0.050
46 AT1G32763 AT1G32763 [Cysteine-rich protein] 2.834 no data
47 AT1G63550 AT1G63550 [Receptor-like protein kinase-related family protein] 2.830 -0.028
48 AT1G35230 AT1G35230 AGP5, arabinogalactan protein 5 2.801 -0.074
49 AT1G76220 AT1G76220 unknown -6.388 -0.127
50 AT4G08040 AT4G08040 ACS11, 1-aminocyclopropane-1-carboxylate synthase 11 -4.945 0.389
51 AT5G24110 AT5G24110 ATWRKY30, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 30, WRKY30, WRKY DNA-binding protein 30 -4.418 -0.038
52 AT1G52342 AT1G52342 unknown -4.007 no data
53 AT4G01680 AT4G01680 AtMYB55, myb domain protein 55, MYB55, myb domain protein 55 -3.378 0.140
54 AT1G70720 AT1G70720 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -3.104 -0.298
55 AT1G07985 AT1G07985 [Expressed protein] -3.099 no data
56 AT3G46613 AT3G46613 DVL15, DEVIL 15, RTFL4, ROTUNDIFOLIA like 4 -3.067 no data
57 AT4G31940 AT4G31940 CYP82C4, cytochrome P450, family 82, subfamily C, polypeptide 4 -3.049 0.065
58 AT4G37310 AT4G37310 CYP81H1, cytochrome P450, family 81, subfamily H, polypeptide 1 -3.042 0.164
59 AT5G57010 AT5G57010 [calmodulin-binding family protein] -3.018 no data
60 AT2G37640 AT2G37640 ATEXP3, EXPANSIN 3, ATEXPA3, ARABIDOPSIS THALIANA EXPANSIN A3, ATHEXP ALPHA 1.9, EXP3 -2.947 -0.064
61 AT4G01670 AT4G01670 unknown -2.879 no data
62 AT5G27810 AT5G27810 [MADS-box transcription factor family protein] -2.817 0.013
63 AT5G65300 AT5G65300 unknown -2.729 0.112
64 AT2G30750 AT2G30750 CYP71A12, cytochrome P450, family 71, subfamily A, polypeptide 12 -2.661 -0.082
65 AT4G39952 AT4G39952 [Pentatricopeptide repeat (PPR) superfamily protein] -2.623 no data
66 AT1G63720 AT1G63720 unknown -2.613 0.091
67 AT5G57785 AT5G57785 unknown -2.583 0.392
68 AT3G09280 AT3G09280 unknown -2.539 0.139
69 AT3G59710 AT3G59710 [NAD(P)-binding Rossmann-fold superfamily protein] -2.511 0.404
70 AT2G34490 AT2G34490 CYP710A2, cytochrome P450, family 710, subfamily A, polypeptide 2 -2.430 -0.553
71 AT5G38020 AT5G38020 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -2.401 -0.598
72 AT3G25655 AT3G25655 IDL1, inflorescence deficient in abscission (IDA)-like 1 -2.398 0.019
73 AT2G26870 AT2G26870 NPC2, non-specific phospholipase C2 -2.313 0.011
74 AT5G17800 AT5G17800 AtMYB56, myb domain protein 56, MYB56, myb domain protein 56 -2.278 0.060
75 AT1G18870 AT1G18870 ATICS2, ARABIDOPSIS ISOCHORISMATE SYNTHASE 2, ICS2, isochorismate synthase 2 -2.269 -0.489
76 AT4G36780 AT4G36780 BEH2, BES1/BZR1 homolog 2 -2.244 0.130
77 AT1G76790 AT1G76790 IGMT5, indole glucosinolate O-methyltransferase 5 -2.232 -0.286
78 AT5G38940 AT5G38940 [RmlC-like cupins superfamily protein] -2.203 no data
79 AT5G39050 AT5G39050 PMAT1, phenolic glucoside malonyltransferase 1 -2.180 0.115
80 AT2G41240 AT2G41240 BHLH100, basic helix-loop-helix protein 100 -2.156 no data
81 AT5G13080 AT5G13080 ATWRKY75, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY75, WRKY DNA-binding protein 75 -2.154 -0.393
82 AT1G55020 AT1G55020 ATLOX1, ARABIDOPSIS LIPOXYGENASE 1, LOX1, lipoxygenase 1 -2.123 -0.123
83 AT1G58170 AT1G58170 [Disease resistance-responsive (dirigent-like protein) family protein] -2.119 -0.180
84 AT4G28703 AT4G28703 [RmlC-like cupins superfamily protein] -2.101 0.254
85 AT5G20790 AT5G20790 unknown -2.096 -0.036
86 AT1G22160 AT1G22160 unknown -2.072 -0.335
87 AT5G66080 AT5G66080 APD9, Arabidopsis Pp2c clade D 9 -2.057 0.171
88 AT5G38200 AT5G38200 [Class I glutamine amidotransferase-like superfamily protein] -2.030 no data
89 AT1G76590 AT1G76590 [PLATZ transcription factor family protein] -2.025 0.031
90 AT3G18710 AT3G18710 ATPUB29, ARABIDOPSIS THALIANA PLANT U-BOX 29, PUB29, plant U-box 29 -2.017 -0.106
91 AT2G41312 AT2G41312 other RNA -1.992 no data
92 AT5G05880 AT5G05880 [UDP-Glycosyltransferase superfamily protein] -1.974 0.133
93 AT1G51170 AT1G51170 AGC2-3, AGC2 kinase 3, UCN, UNICORN -1.958 -0.002
94 AT1G21410 AT1G21410 SKP2A -1.952 0.067
95 AT2G39710 AT2G39710 [Eukaryotic aspartyl protease family protein] -1.924 -0.151