4.0:Information of module
root cap pGL2(QC pSCRBRI1) 3h BL
In comparison with root cap pGL2 8h BL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006820 anion transport BP 3.656e-28
GO:0071705 nitrogen compound transport BP 4.281e-27
GO:0006811 ion transport BP 9.823e-26
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0050896 response to stimulus BP 1.811e-18
GO:0042221 response to chemical BP 1.624e-16
GO:0010033 response to organic substance BP 2.175e-12
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
root cap pGL2(QC pSCRBRI1) 3h BL		 Log2 signal ratio
root cap pGL2 8h BL
1 AT5G36925 AT5G36925 unknown 5.126 -1.840
2 AT4G37780 AT4G37780 ATMYB87, MYB87, myb domain protein 87 4.516 0.079
3 AT1G52690 AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 4.386 2.099
4 AT4G03480 AT4G03480 [Ankyrin repeat family protein] 4.208 1.907
5 AT5G36920 AT5G36920 unknown 4.177 -0.472
6 AT4G18195 AT4G18195 ATPUP8, ARABIDOPSIS THALIANA PURINE PERMEASE 8, PUP8, purine permease 8 4.132 1.437
7 AT5G05390 AT5G05390 LAC12, laccase 12 4.007 -0.749
8 AT5G48430 AT5G48430 [Eukaryotic aspartyl protease family protein] 3.963 -0.071
9 AT4G14365 AT4G14365 XBAT34, XB3 ortholog 4 in Arabidopsis thaliana 3.903 0.368
10 AT4G23170 AT4G23170 CRK9, CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 9, EP1 3.756 -1.287
11 AT2G26150 AT2G26150 ATHSFA2, heat shock transcription factor A2, HSFA2, heat shock transcription factor A2 3.404 0.467
12 AT1G51913 AT1G51913 [LOCATED IN: endomembrane system] 3.289 1.528
13 AT1G22890 AT1G22890 unknown 3.269 3.075
14 AT4G11480 AT4G11480 CRK32, cysteine-rich RLK (RECEPTOR-like protein kinase) 32 3.173 0.079
15 AT1G21320 AT1G21320 [nucleotide binding] 3.146 -1.608
16 AT5G37490 AT5G37490 [ARM repeat superfamily protein] 3.045 0.480
17 AT2G02010 AT2G02010 GAD4, glutamate decarboxylase 4 3.036 2.464
18 AT1G74710 AT1G74710 ATICS1, ARABIDOPSIS ISOCHORISMATE SYNTHASE 1, EDS16, ENHANCED DISEASE SUSCEPTIBILITY TO ERYSIPHE ORONTII 16, ICS1, ISOCHORISMATE SYNTHASE 1, SID2, SALICYLIC ACID INDUCTION DEFICIENT 2 3.011 1.045
19 AT1G22900 AT1G22900 [Disease resistance-responsive (dirigent-like protein) family protein] 2.868 0.595
20 AT2G31540 AT2G31540 [GDSL-like Lipase/Acylhydrolase superfamily protein] 2.681 0.752
21 AT4G14450 AT4G14450 unknown 2.665 0.079
22 AT1G49000 AT1G49000 unknown 2.636 1.238
23 AT5G20230 AT5G20230 ATBCB, blue-copper-binding protein, BCB, BLUE COPPER BINDING PROTEIN, BCB, blue-copper-binding protein, SAG14, SENESCENCE ASSOCIATED GENE 14 2.527 -0.905
24 AT1G14540 AT1G14540 PER4, peroxidase 4 2.444 1.718
25 AT4G04700 AT4G04700 CPK27, calcium-dependent protein kinase 27 2.382 0.677
26 AT4G15417 AT4G15417 ATRTL1, RNAse II-like 1, RTL1, RNAse II-like 1 2.348 0.525
27 AT4G21870 AT4G21870 [HSP20-like chaperones superfamily protein] 2.307 0.719
28 AT3G50470 AT3G50470 HR3, homolog of RPW8 3, MLA10, INTRACELLULAR MILDEW A 10 2.264 0.413
29 AT5G64750 AT5G64750 ABR1, ABA REPRESSOR1 2.221 -0.551
30 AT1G07620 AT1G07620 ATOBGM, TRM32, TON1 Recruiting Motif 32 2.205 0.204
31 AT5G52640 AT5G52640 ATHS83, AtHsp90-1, HEAT SHOCK PROTEIN 90-1, ATHSP90.1, heat shock protein 90.1, HSP81-1, HEAT SHOCK PROTEIN 81-1, HSP81.1, HSP83, HEAT SHOCK PROTEIN 83, HSP90.1, heat shock protein 90.1 2.171 0.586
32 AT5G65300 AT5G65300 unknown -2.631 -3.909
33 AT1G63720 AT1G63720 unknown -2.303 -1.481
34 AT1G77760 AT1G77760 GNR1, NIA1, nitrate reductase 1, NR1, NITRATE REDUCTASE 1 -2.042 -0.408
35 AT3G49570 AT3G49570 LSU3, RESPONSE TO LOW SULFUR 3 -1.963 -2.110
36 AT4G01680 AT4G01680 AtMYB55, myb domain protein 55, MYB55, myb domain protein 55 -1.925 -3.453
37 AT3G15030 AT3G15030 MEE35, maternal effect embryo arrest 35, TCP4, TCP family transcription factor 4 -1.920 -2.748
38 AT2G25450 AT2G25450 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -1.872 -1.761
39 AT3G25655 AT3G25655 IDL1, inflorescence deficient in abscission (IDA)-like 1 -1.856 -1.894
40 AT5G17800 AT5G17800 AtMYB56, myb domain protein 56, MYB56, myb domain protein 56 -1.855 -2.295
41 AT3G49580 AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 -1.774 -1.919
42 AT2G25090 AT2G25090 AtCIPK16, CIPK16, CBL-interacting protein kinase 16, SnRK3.18, SNF1-RELATED PROTEIN KINASE 3.18 -1.764 1.357
43 AT5G38200 AT5G38200 [Class I glutamine amidotransferase-like superfamily protein] -1.692 0.123
44 AT3G50660 AT3G50660 AtDWF4, CLM, CLOMAZONE-RESISTANT, CYP90B1, CYTOCHROME P450 90B1, DWF4, DWARF 4, PSC1, PARTIALLY SUPPRESSING COI1 INSENSITIVITY TO JA 1, SAV1, SHADE AVOIDANCE 1, SNP2, SUPPRESSOR OF NPH4 2 -1.629 -1.733
45 AT4G36220 AT4G36220 CYP84A1, CYTOCHROME P450 84A1, FAH1, ferulic acid 5-hydroxylase 1 -1.617 -0.031
46 AT5G65340 AT5G65340 unknown -1.572 -0.445
47 AT4G30270 AT4G30270 MERI-5, MERISTEM 5, MERI5B, meristem-5, SEN4, SENESCENCE 4, XTH24, xyloglucan endotransglucosylase/hydrolase 24 -1.560 -0.557
48 AT4G27410 AT4G27410 ANAC072, Arabidopsis NAC domain containing protein 72, RD26, RESPONSIVE TO DESICCATION 26 -1.534 0.433
49 AT2G35200 AT2G35200 unknown -1.510 -1.510
50 AT5G03390 AT5G03390 unknown -1.499 -0.210
51 AT3G23570 AT3G23570 [alpha/beta-Hydrolases superfamily protein] -1.474 -1.187
52 AT5G14200 AT5G14200 ATIMD1, ARABIDOPSIS ISOPROPYLMALATE DEHYDROGENASE 1, IMD1, isopropylmalate dehydrogenase 1 -1.452 -0.082
53 AT2G42430 AT2G42430 ASL18, ASYMMETRIC LEAVES2-LIKE 18, LBD16, lateral organ boundaries-domain 16 -1.441 -1.002
54 AT2G26370 AT2G26370 [MD-2-related lipid recognition domain-containing protein] -1.422 -0.887
55 AT4G38770 AT4G38770 ATPRP4, ARABIDOPSIS THALIANA PROLINE-RICH PROTEIN 4, PRP4, proline-rich protein 4 -1.410 -0.115
56 AT2G23620 AT2G23620 ATMES1, ARABIDOPSIS THALIANA METHYL ESTERASE 1, MES1, methyl esterase 1 -1.383 -1.259
57 AT3G13380 AT3G13380 BRL3, BRI1-like 3 -1.355 -1.890
58 AT5G66080 AT5G66080 APD9, Arabidopsis Pp2c clade D 9 -1.340 -2.217
59 AT1G51170 AT1G51170 AGC2-3, AGC2 kinase 3, UCN, UNICORN -1.319 -1.313
60 AT3G54600 AT3G54600 DJ-1f, DJ1F -1.313 -0.547
61 AT1G14960 AT1G14960 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -1.288 -0.211