4.0:Information of module
root cap pGL2(QC pSCRBRI1) 3h BL
In comparison with root cap pGL2(QC pSCRBRI1) 8h BL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006820 anion transport BP 3.656e-28
GO:0071705 nitrogen compound transport BP 4.281e-27
GO:0006811 ion transport BP 9.823e-26
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0050896 response to stimulus BP 1.811e-18
GO:0042221 response to chemical BP 1.624e-16
GO:0010033 response to organic substance BP 2.175e-12
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
root cap pGL2(QC pSCRBRI1) 3h BL		 Log2 signal ratio
root cap pGL2(QC pSCRBRI1) 8h BL
1 AT5G36925 AT5G36925 unknown 5.126 2.859
2 AT4G37780 AT4G37780 ATMYB87, MYB87, myb domain protein 87 4.516 4.238
3 AT1G52690 AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 4.386 1.007
4 AT4G03480 AT4G03480 [Ankyrin repeat family protein] 4.208 3.891
5 AT5G36920 AT5G36920 unknown 4.177 3.126
6 AT4G18195 AT4G18195 ATPUP8, ARABIDOPSIS THALIANA PURINE PERMEASE 8, PUP8, purine permease 8 4.132 3.610
7 AT5G05390 AT5G05390 LAC12, laccase 12 4.007 3.252
8 AT5G48430 AT5G48430 [Eukaryotic aspartyl protease family protein] 3.963 2.726
9 AT4G14365 AT4G14365 XBAT34, XB3 ortholog 4 in Arabidopsis thaliana 3.903 3.496
10 AT4G23170 AT4G23170 CRK9, CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 9, EP1 3.756 2.733
11 AT2G26150 AT2G26150 ATHSFA2, heat shock transcription factor A2, HSFA2, heat shock transcription factor A2 3.404 1.133
12 AT1G51913 AT1G51913 [LOCATED IN: endomembrane system] 3.289 2.658
13 AT1G22890 AT1G22890 unknown 3.269 2.188
14 AT4G11480 AT4G11480 CRK32, cysteine-rich RLK (RECEPTOR-like protein kinase) 32 3.173 2.319
15 AT1G21320 AT1G21320 [nucleotide binding] 3.146 2.585
16 AT5G37490 AT5G37490 [ARM repeat superfamily protein] 3.045 2.476
17 AT2G02010 AT2G02010 GAD4, glutamate decarboxylase 4 3.036 1.110
18 AT1G74710 AT1G74710 ATICS1, ARABIDOPSIS ISOCHORISMATE SYNTHASE 1, EDS16, ENHANCED DISEASE SUSCEPTIBILITY TO ERYSIPHE ORONTII 16, ICS1, ISOCHORISMATE SYNTHASE 1, SID2, SALICYLIC ACID INDUCTION DEFICIENT 2 3.011 1.278
19 AT1G22900 AT1G22900 [Disease resistance-responsive (dirigent-like protein) family protein] 2.868 1.847
20 AT2G31540 AT2G31540 [GDSL-like Lipase/Acylhydrolase superfamily protein] 2.681 2.179
21 AT4G14450 AT4G14450 unknown 2.665 2.048
22 AT1G49000 AT1G49000 unknown 2.636 2.296
23 AT5G20230 AT5G20230 ATBCB, blue-copper-binding protein, BCB, BLUE COPPER BINDING PROTEIN, BCB, blue-copper-binding protein, SAG14, SENESCENCE ASSOCIATED GENE 14 2.527 -0.130
24 AT1G14540 AT1G14540 PER4, peroxidase 4 2.444 1.735
25 AT4G04700 AT4G04700 CPK27, calcium-dependent protein kinase 27 2.382 2.065
26 AT4G15417 AT4G15417 ATRTL1, RNAse II-like 1, RTL1, RNAse II-like 1 2.348 0.509
27 AT4G21870 AT4G21870 [HSP20-like chaperones superfamily protein] 2.307 0.535
28 AT3G50470 AT3G50470 HR3, homolog of RPW8 3, MLA10, INTRACELLULAR MILDEW A 10 2.264 2.267
29 AT5G64750 AT5G64750 ABR1, ABA REPRESSOR1 2.221 0.075
30 AT1G07620 AT1G07620 ATOBGM, TRM32, TON1 Recruiting Motif 32 2.205 1.500
31 AT5G52640 AT5G52640 ATHS83, AtHsp90-1, HEAT SHOCK PROTEIN 90-1, ATHSP90.1, heat shock protein 90.1, HSP81-1, HEAT SHOCK PROTEIN 81-1, HSP81.1, HSP83, HEAT SHOCK PROTEIN 83, HSP90.1, heat shock protein 90.1 2.171 -0.351
32 AT5G65300 AT5G65300 unknown -2.631 -1.808
33 AT1G63720 AT1G63720 unknown -2.303 -1.251
34 AT1G77760 AT1G77760 GNR1, NIA1, nitrate reductase 1, NR1, NITRATE REDUCTASE 1 -2.042 0.370
35 AT3G49570 AT3G49570 LSU3, RESPONSE TO LOW SULFUR 3 -1.963 -1.701
36 AT4G01680 AT4G01680 AtMYB55, myb domain protein 55, MYB55, myb domain protein 55 -1.925 -2.259
37 AT3G15030 AT3G15030 MEE35, maternal effect embryo arrest 35, TCP4, TCP family transcription factor 4 -1.920 -1.610
38 AT2G25450 AT2G25450 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -1.872 -1.527
39 AT3G25655 AT3G25655 IDL1, inflorescence deficient in abscission (IDA)-like 1 -1.856 -2.799
40 AT5G17800 AT5G17800 AtMYB56, myb domain protein 56, MYB56, myb domain protein 56 -1.855 -1.222
41 AT3G49580 AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 -1.774 -2.014
42 AT2G25090 AT2G25090 AtCIPK16, CIPK16, CBL-interacting protein kinase 16, SnRK3.18, SNF1-RELATED PROTEIN KINASE 3.18 -1.764 -0.930
43 AT5G38200 AT5G38200 [Class I glutamine amidotransferase-like superfamily protein] -1.692 -0.382
44 AT3G50660 AT3G50660 AtDWF4, CLM, CLOMAZONE-RESISTANT, CYP90B1, CYTOCHROME P450 90B1, DWF4, DWARF 4, PSC1, PARTIALLY SUPPRESSING COI1 INSENSITIVITY TO JA 1, SAV1, SHADE AVOIDANCE 1, SNP2, SUPPRESSOR OF NPH4 2 -1.629 -1.034
45 AT4G36220 AT4G36220 CYP84A1, CYTOCHROME P450 84A1, FAH1, ferulic acid 5-hydroxylase 1 -1.617 -0.895
46 AT5G65340 AT5G65340 unknown -1.572 -1.152
47 AT4G30270 AT4G30270 MERI-5, MERISTEM 5, MERI5B, meristem-5, SEN4, SENESCENCE 4, XTH24, xyloglucan endotransglucosylase/hydrolase 24 -1.560 -1.622
48 AT4G27410 AT4G27410 ANAC072, Arabidopsis NAC domain containing protein 72, RD26, RESPONSIVE TO DESICCATION 26 -1.534 -1.043
49 AT2G35200 AT2G35200 unknown -1.510 -0.528
50 AT5G03390 AT5G03390 unknown -1.499 1.306
51 AT3G23570 AT3G23570 [alpha/beta-Hydrolases superfamily protein] -1.474 -1.150
52 AT5G14200 AT5G14200 ATIMD1, ARABIDOPSIS ISOPROPYLMALATE DEHYDROGENASE 1, IMD1, isopropylmalate dehydrogenase 1 -1.452 0.584
53 AT2G42430 AT2G42430 ASL18, ASYMMETRIC LEAVES2-LIKE 18, LBD16, lateral organ boundaries-domain 16 -1.441 -0.849
54 AT2G26370 AT2G26370 [MD-2-related lipid recognition domain-containing protein] -1.422 -0.731
55 AT4G38770 AT4G38770 ATPRP4, ARABIDOPSIS THALIANA PROLINE-RICH PROTEIN 4, PRP4, proline-rich protein 4 -1.410 -0.083
56 AT2G23620 AT2G23620 ATMES1, ARABIDOPSIS THALIANA METHYL ESTERASE 1, MES1, methyl esterase 1 -1.383 -0.954
57 AT3G13380 AT3G13380 BRL3, BRI1-like 3 -1.355 -1.062
58 AT5G66080 AT5G66080 APD9, Arabidopsis Pp2c clade D 9 -1.340 -0.982
59 AT1G51170 AT1G51170 AGC2-3, AGC2 kinase 3, UCN, UNICORN -1.319 -0.897
60 AT3G54600 AT3G54600 DJ-1f, DJ1F -1.313 0.126
61 AT1G14960 AT1G14960 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -1.288 -1.471