4.0:Information of module
brat1
In comparison with Heat shock optimum help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009627 systemic acquired resistance BP 6.997e-13
GO:0009814 defense response, incompatible interacti... BP 1.114e-12
GO:0009697 salicylic acid biosynthetic process BP 8.179e-12
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042138 meiotic DNA double-strand break formatio... BP 3.662e-04
GO:0051321 meiotic cell cycle BP 5.736e-04
GO:0090305 nucleic acid phosphodiester bond hydroly... BP 6.778e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
brat1		 Log2 signal ratio
Heat shock optimum
1 AT1G30390 AT1G30390 [non-LTR retrotransposon family (LINE), has a 1.9e-17 P-value blast match to GB:AAB41224 ORF2 (LINE-element) (Rattus norvegicus)] 4.466 no data
2 AT3G29580 AT3G29580 [Arabidopsis phospholipase-like protein (PEARLI 4) with TRAF-like domain] 2.980 no data
3 AT1G14880 AT1G14880 AtPCR1, PCR1, PLANT CADMIUM RESISTANCE 1 2.919 no data
4 AT5G27845 AT5G27845 [non-LTR retrotransposon family (LINE), has a 6.6e-32 P-value blast match to GB:AAA39398 ORF2 (Mus musculus) (LINE-element)] 2.875 no data
5 AT5G44925 AT5G44925 [copia-like retrotransposon family, has a 0. P-value blast match to GB:AAC02666 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)] 2.814 no data
6 AT3G54340 AT3G54340 AP3, APETALA 3, ATAP3 2.426 -0.089
7 AT4G23310 AT4G23310 CRK23, cysteine-rich RLK (RECEPTOR-like protein kinase) 23 2.416 -0.008
8 AT2G14610 AT2G14610 ATPR1, PATHOGENESIS-RELATED GENE 1, PR 1, PATHOGENESIS-RELATED GENE 1, PR1, pathogenesis-related gene 1 2.368 0.158
9 AT3G54730 AT3G54730 unknown 2.353 no data
10 AT2G01422 AT2G01422 2.348 no data
11 AT4G04500 AT4G04500 CRK37, cysteine-rich RLK (RECEPTOR-like protein kinase) 37 2.294 0.021
12 AT1G04660 AT1G04660 [glycine-rich protein] 2.259 -0.012
13 AT4G23150 AT4G23150 CRK7, cysteine-rich RLK (RECEPTOR-like protein kinase) 7 2.243 0.071
14 AT5G65330 AT5G65330 AGL78, AGAMOUS-like 78 2.241 -0.032
15 AT2G45650 AT2G45650 AGL6, AGAMOUS-like 6, RSB1, REDUCED SHOOT BRANCHING 1 2.229 -0.007
16 AT1G69120 AT1G69120 AGL7, AGAMOUS-like 7, AP1, APETALA1, AtAP1 2.208 -0.032
17 AT3G24900 AT3G24900 AtRLP39, receptor like protein 39, RLP39, receptor like protein 39 2.178 0.016
18 AT1G20350 AT1G20350 ATTIM17-1, translocase inner membrane subunit 17-1, TIM17-1, translocase inner membrane subunit 17-1 2.151 0.106
19 AT2G29160 AT2G29160 [pseudogene] 2.146 no data
20 AT5G27940 AT5G27940 WPP3, WPP domain protein 3 2.138 -0.005
21 AT5G25340 AT5G25340 [Ubiquitin-like superfamily protein] 2.092 -0.068
22 AT1G67105 AT1G67105 other RNA 2.081 no data
23 AT1G58684 AT1G58684 [Ribosomal protein S5 family protein] -5.962 no data
24 AT3G42658 AT3G42658 SADHU3-2, sadhu non-coding retrotransposon 3-2 -4.992 no data
25 AT5G35057 AT5G35057 [gypsy-like retrotransposon family (Athila), has a 8.7e-292 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] -4.551 no data
26 AT3G06437 AT3G06437 [pseudogene] -3.954 no data
27 AT5G35052 AT5G35052 [copia-like retrotransposon family, has a 3.1e-94 P-value blast match to GB:AAD12998 pol polyprotein (Ty1_Copia-element) (Zea mays)] -3.791 no data
28 ATCG00920 ATCG00920 RRN16S.1, ribosomal RNA16S -3.646 no data
29 AT5G44980 AT5G44980 [F-box/RNI-like/FBD-like domains-containing protein] -3.641 -0.105
30 AT3G30720 AT3G30720 QQS, QUA-QUINE STARCH -3.376 0.008
31 AT1G58983 AT1G58983 [Ribosomal protein S5 family protein] -3.119 no data
32 AT1G22980 AT1G22980 unknown -2.789 no data
33 AT2G27380 AT2G27380 ATEPR1, extensin proline-rich 1, EPR1, extensin proline-rich 1 -2.600 -0.006
34 AT4G03816 AT4G03816 [copia-like retrotransposon family, has a 8.6e-22 P-value blast match to GB:BAA11674 ORF(AA 1-1338) (Ty1_Copia-element) (Nicotiana tabacum)] -2.591 no data
35 AT5G34795 AT5G34795 [pseudogene] -2.567 no data
36 AT5G34825 AT5G34825 [Mutator-like transposase family, has a 4.7e-76 P-value blast match to Q9ZQM3 /24-192 Pfam PF03108 MuDR family transposase (MuDr-element domain)] -2.546 no data
37 AT3G21020 AT3G21020 [copia-like retrotransposon family, has a 5.4e-14 P-value blast match to gb|AAO73529.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family)] -2.436 0.027
38 AT5G34800 AT5G34800 [pseudogene] -2.404 0.060
39 AT5G56370 AT5G56370 [F-box/RNI-like/FBD-like domains-containing protein] -2.208 -0.072
40 AT5G39120 AT5G39120 [RmlC-like cupins superfamily protein] -2.203 no data
41 AT5G34790 AT5G34790 [CACTA-like transposase family (Ptta/En/Spm), has a 2.9e-11 P-value blast match to At5g36655.1/81-333 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] -2.098 -0.095
42 AT3G17280 AT3G17280 [F-box and associated interaction domains-containing protein] -2.086 -0.029
43 AT3G27940 AT3G27940 LBD26, LOB domain-containing protein 26 -2.031 no data