4.0:Information of module
brat1nrpe1
In comparison with wrky33 mock help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006952 defense response BP 6.760e-10
GO:0098542 defense response to other organism BP 3.501e-08
GO:0009755 hormone-mediated signaling pathway BP 8.228e-08
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0033044 regulation of chromosome organization BP 6.748e-04
GO:0042138 meiotic DNA double-strand break formatio... BP 2.110e-03
GO:0000003 reproduction BP 2.341e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
brat1nrpe1		 Log2 signal ratio
wrky33 mock
1 AT5G27845 AT5G27845 [non-LTR retrotransposon family (LINE), has a 6.6e-32 P-value blast match to GB:AAA39398 ORF2 (Mus musculus) (LINE-element)] 7.794 0.453
2 AT1G33840 AT1G33840 unknown 7.740 2.267
3 AT5G41830 AT5G41830 [RNI-like superfamily protein] 6.547 1.015
4 AT5G35205 AT5G35205 [non-LTR retrotransposon family (LINE), has a 1.1e-36 P-value blast match to GB:BAA20419 reverse transcriptase (LINE-element) (Mus musculus)] 5.373 0.078
5 AT4G01975 AT4G01975 [pseudogene] 5.354 0.665
6 AT3G28899 AT3G28899 unknown 5.333 0.997
7 AT1G33850 AT1G33850 [Ribosomal protein S19 family protein] 5.254 0.078
8 AT5G35207 AT5G35207 [pseudogene] 5.144 0.078
9 AT1G47980 AT1G47980 unknown 4.992 0.078
10 AT1G28000 AT1G28000 [Pentatricopeptide repeat (PPR) superfamily protein] 4.981 0.078
11 AT1G30390 AT1G30390 [non-LTR retrotransposon family (LINE), has a 1.9e-17 P-value blast match to GB:AAB41224 ORF2 (LINE-element) (Rattus norvegicus)] 4.936 1.153
12 AT2G01422 AT2G01422 4.891 1.207
13 AT3G30720 AT3G30720 QQS, QUA-QUINE STARCH -5.558 0.646
14 AT5G34800 AT5G34800 [pseudogene] -5.108 -0.110
15 AT3G42658 AT3G42658 SADHU3-2, sadhu non-coding retrotransposon 3-2 -4.998 -0.168
16 AT5G34795 AT5G34795 [pseudogene] -4.837 0.080
17 AT5G35057 AT5G35057 [gypsy-like retrotransposon family (Athila), has a 8.7e-292 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] -4.554 0.078
18 AT2G15040 AT2G15040 AtRLP18, receptor like protein 18, RLP18, receptor like protein 18 -4.135 -0.166
19 AT5G34790 AT5G34790 [CACTA-like transposase family (Ptta/En/Spm), has a 2.9e-11 P-value blast match to At5g36655.1/81-333 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] -4.112 -0.132
20 AT3G06437 AT3G06437 [pseudogene] -4.031 0.078
21 AT5G35052 AT5G35052 [copia-like retrotransposon family, has a 3.1e-94 P-value blast match to GB:AAD12998 pol polyprotein (Ty1_Copia-element) (Zea mays)] -3.796 0.078
22 AT5G39120 AT5G39120 [RmlC-like cupins superfamily protein] -3.750 0.078
23 AT5G44980 AT5G44980 [F-box/RNI-like/FBD-like domains-containing protein] -3.253 0.392