4.0:Information of module
Light 3day ivd
In comparison with root endodermis and quiescent center 40 mM NaCl help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009814 defense response, incompatible interacti... BP 1.222e-22
GO:0009627 systemic acquired resistance BP 2.184e-20
GO:0072330 monocarboxylic acid biosynthetic process BP 5.079e-20
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0050896 response to stimulus BP 4.198e-15
GO:0042221 response to chemical BP 1.469e-14
GO:0006820 anion transport BP 2.287e-11
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Light 3day ivd		 Log2 signal ratio
root endodermis and quiescent center 40 mM NaCl
1 AT1G76470 AT1G76470 [NAD(P)-binding Rossmann-fold superfamily protein] 3.847 -0.203
2 AT2G29470 AT2G29470 ATGSTU3, glutathione S-transferase tau 3, GST21, GLUTATHIONE S-TRANSFERASE 21, GSTU3, glutathione S-transferase tau 3 3.348 0.174
3 AT5G49525 AT5G49525 unknown 2.857 no data
4 AT4G31355 AT4G31355 unknown 2.772 no data
5 AT5G22570 AT5G22570 ATWRKY38, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 38, WRKY38, WRKY DNA-binding protein 38 2.759 -0.348
6 AT1G67105 AT1G67105 other RNA 2.758 no data
7 AT2G30770 AT2G30770 CYP71A13, cytochrome P450, family 71, subfamily A, polypeptide 13 2.290 0.027
8 AT3G04717 AT3G04717 [pseudogene] 2.213 no data
9 AT3G49340 AT3G49340 [Cysteine proteinases superfamily protein] 2.198 -0.024
10 AT1G19250 AT1G19250 FMO1, flavin-dependent monooxygenase 1 2.162 0.005
11 AT4G09770 AT4G09770 [TRAF-like family protein] 2.138 no data
12 AT5G65080 AT5G65080 AGL68, AGAMOUS-like 68, MAF5, MADS AFFECTING FLOWERING 5 2.069 0.010
13 AT5G07780 AT5G07780 AtFH19, FH19, formin homolog 19 2.035 0.025
14 AT3G26830 AT3G26830 CYP71B15, PAD3, PHYTOALEXIN DEFICIENT 3 2.001 0.512
15 AT5G07760 AT5G07760 [formin homology 2 domain-containing protein / FH2 domain-containing protein] 1.986 0.010
16 AT3G44860 AT3G44860 FAMT, farnesoic acid carboxyl-O-methyltransferase 1.925 no data
17 AT4G39610 AT4G39610 unknown 1.909 -0.012
18 AT4G34250 AT4G34250 KCS16, 3-ketoacyl-CoA synthase 16 1.761 0.000
19 AT1G52830 AT1G52830 IAA6, indole-3-acetic acid 6, SHY1, SHORT HYPOCOTYL 1 1.760 0.091
20 AT4G37990 AT4G37990 ATCAD8, ARABIDOPSIS THALIANA CINNAMYL-ALCOHOL DEHYDROGENASE 8, CAD-B2, CINNAMYL-ALCOHOL DEHYDROGENASE B2, ELI3, ELICITOR-ACTIVATED GENE 3, ELI3-2, elicitor-activated gene 3-2 -5.478 0.419
21 AT5G59310 AT5G59310 LTP4, lipid transfer protein 4 -5.273 0.180
22 AT3G28740 AT3G28740 CYP81D11, cytochrome P450, family 81, subfamily D, polypeptide 11 -4.873 0.134
23 AT3G01420 AT3G01420 ALPHA-DOX1, alpha-dioxygenase 1, DIOX1, DOX1, PADOX-1, plant alpha dioxygenase 1 -4.452 0.285
24 AT2G41260 AT2G41260 ATM17, M17 -4.403 0.036
25 AT1G73260 AT1G73260 ATKTI1, ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, KTI1, kunitz trypsin inhibitor 1 -4.390 0.089
26 AT3G59930 AT3G59930 unknown -4.123 no data
27 AT4G21680 AT4G21680 AtNPF7.2, NPF7.2, NRT1/ PTR family 7.2, NRT1.8, NITRATE TRANSPORTER 1.8 -4.060 0.166
28 AT5G16960 AT5G16960 [Zinc-binding dehydrogenase family protein] -3.432 0.088
29 AT5G59320 AT5G59320 LTP3, lipid transfer protein 3 -3.388 -0.056
30 AT1G06080 AT1G06080 ADS1, delta 9 desaturase 1, AtADS1 -3.384 -0.191
31 AT5G14180 AT5G14180 MPL1, Myzus persicae-induced lipase 1 -3.321 0.045
32 AT3G55970 AT3G55970 ATJRG21, JRG21, jasmonate-regulated gene 21 -3.276 0.343
33 AT3G44300 AT3G44300 AtNIT2, nitrilase 2, NIT2, nitrilase 2 -3.186 no data
34 AT2G38380 AT2G38380 [Peroxidase superfamily protein] -3.165 no data
35 AT1G09500 AT1G09500 [NAD(P)-binding Rossmann-fold superfamily protein] -3.106 0.127
36 AT4G06506 AT4G06506 [gypsy-like retrotransposon family (Athila), has a 3.1e-255 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] -3.105 no data
37 AT5G43580 AT5G43580 UPI, UNUSUAL SERINE PROTEASE INHIBITOR -3.043 0.252