4.0:Information of module
Light 3day wt
In comparison with Dark 6h wt help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009725 response to hormone BP 8.120e-14
GO:0009719 response to endogenous stimulus BP 2.457e-13
GO:0042335 cuticle development BP 1.054e-12
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006952 defense response BP 2.097e-90
GO:0009607 response to biotic stimulus BP 7.977e-89
GO:0043207 response to external biotic stimulus BP 6.318e-88
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Light 3day wt		 Log2 signal ratio
Dark 6h wt
1 AT1G15380 AT1G15380 GLYI4, glyoxylase I 4 4.690 8.789
2 AT5G44420 AT5G44420 LCR77, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 77, PDF1.2, plant defensin 1.2, PDF1.2A, PLANT DEFENSIN 1.2A 4.318 1.771
3 AT5G37300 AT5G37300 WSD1 2.339 -2.087
4 AT4G04223 AT4G04223 other RNA 1.942 1.579
5 AT1G02205 AT1G02205 CER1, ECERIFERUM 1, CER22, ECERIFERUM 22 1.791 -1.159
6 AT5G66052 AT5G66052 unknown 1.651 1.115
7 AT1G75900 AT1G75900 [GDSL-like Lipase/Acylhydrolase superfamily protein] 1.583 0.778
8 AT2G39800 AT2G39800 ATP5CS, P5CS1, delta1-pyrroline-5-carboxylate synthase 1 1.576 1.764
9 AT2G38995 AT2G38995 [O-acyltransferase (WSD1-like) family protein] 1.512 -5.688
10 AT5G45950 AT5G45950 [GDSL-like Lipase/Acylhydrolase superfamily protein] 1.405 -2.393
11 AT5G54585 AT5G54585 unknown 1.403 0.405
12 AT1G78170 AT1G78170 unknown 1.400 0.813
13 AT1G60590 AT1G60590 [Pectin lyase-like superfamily protein] 1.386 -6.507
14 AT4G39510 AT4G39510 CYP96A12, cytochrome P450, family 96, subfamily A, polypeptide 12 1.380 -2.954
15 AT1G76240 AT1G76240 unknown 1.319 -3.134
16 AT1G19670 AT1G19670 ATCLH1, chlorophyllase 1, ATHCOR1, CORONATINE-INDUCED PROTEIN 1, CLH1, chlorophyllase 1, CORI1, CORONATINE-INDUCED PROTEIN 1 1.308 -3.889
17 AT1G55260 AT1G55260 LTPG6, glycosylphosphatidylinositol-anchored lipid protein transfer 6 1.283 -1.501
18 AT2G23000 AT2G23000 scpl10, serine carboxypeptidase-like 10 1.280 -7.187
19 AT5G41900 AT5G41900 [alpha/beta-Hydrolases superfamily protein] 1.205 -1.951
20 AT4G39330 AT4G39330 ATCAD9, CAD9, cinnamyl alcohol dehydrogenase 9 1.205 -1.283
21 AT4G28780 AT4G28780 [GDSL-like Lipase/Acylhydrolase superfamily protein] 1.192 -1.267
22 AT1G30250 AT1G30250 unknown 1.171 1.746
23 AT5G24150 AT5G24150 SQE5, SQUALENE MONOOXYGENASE 5, SQP1 1.158 -4.143
24 AT3G11340 AT3G11340 UGT76B1, UDP-dependent glycosyltransferase 76B1 -7.304 -4.710
25 AT2G26400 AT2G26400 ARD, ACIREDUCTONE DIOXYGENASE, ARD3, acireductone dioxygenase 3, ATARD3, acireductone dioxygenase 3 -7.301 -7.387
26 AT1G19250 AT1G19250 FMO1, flavin-dependent monooxygenase 1 -7.254 -6.187
27 AT2G13810 AT2G13810 ALD1, AGD2-like defense response protein 1, AtALD1, EDTS5, eds two suppressor 5 -6.956 -7.280
28 AT3G13610 AT3G13610 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein -6.620 -7.369
29 AT4G10500 AT4G10500 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -6.236 -7.466
30 AT3G28510 AT3G28510 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -5.909 -6.066
31 AT2G24850 AT2G24850 TAT, TYROSINE AMINOTRANSFERASE, TAT3, tyrosine aminotransferase 3 -5.802 -5.949
32 AT1G09080 AT1G09080 BIP3, binding protein 3 -5.789 -6.413
33 AT1G32350 AT1G32350 AOX1D, alternative oxidase 1D -5.675 -1.605
34 AT1G56060 AT1G56060 unknown -5.649 -3.900
35 AT4G13890 AT4G13890 EDA36, EMBRYO SAC DEVELOPMENT ARREST 37, EDA37, EMBRYO SAC DEVELOPMENT ARREST 36, SHM5, SERINE HYDROXYMETHYLTRANSFERASE 5 -5.648 -5.192
36 AT2G43570 AT2G43570 CHI, chitinase, putative -5.592 -3.929
37 AT5G64810 AT5G64810 ATWRKY51, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 51, WRKY51, WRKY DNA-binding protein 51 -5.564 -4.254
38 AT1G28480 AT1G28480 GRX480, roxy19 -5.505 -4.554
39 AT2G34500 AT2G34500 CYP710A1, cytochrome P450, family 710, subfamily A, polypeptide 1 -5.489 -0.169
40 AT1G51800 AT1G51800 IOS1, IMPAIRED OOMYCETE SUSCEPTIBILITY 1 -5.397 -1.900
41 AT1G02450 AT1G02450 NIMIN-1, NIMIN1, NIM1-interacting 1 -5.395 -4.936
42 AT4G11170 AT4G11170 RMG1, Resistance Methylated Gene 1 -5.377 -4.581
43 AT3G57240 AT3G57240 AtBG3, BG3, beta-1,3-glucanase 3 -5.335 -6.859
44 AT1G33950 AT1G33950 [Avirulence induced gene (AIG1) family protein] -5.328 -4.291
45 AT3G13950 AT3G13950 unknown -5.304 -3.018