4.0:Information of module
spores of Gigaspora rosea
In comparison with whole roots 140 mM NaCl 16 hour help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006284 base-excision repair BP 5.501e-03
GO:0051052 regulation of DNA metabolic process BP 6.708e-03
GO:0000303 response to superoxide BP 1.113e-02
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0022604 regulation of cell morphogenesis BP 9.092e-03
GO:0051128 regulation of cellular component organiz... BP 9.542e-03
GO:0000902 cell morphogenesis BP 1.018e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
spores of Gigaspora rosea		 Log2 signal ratio
whole roots 140 mM NaCl 16 hour
1 262097_at AT1G55990 [glycine-rich protein] 0.162 -0.010
2 264497_at AT1G30840 ATPUP4, purine permease 4, PUP4, purine permease 4 0.137 -0.252
3 253400_at AT4G32860 unknown 0.128 0.030
4 265925_at AT2G18610 unknown 0.116 0.006
5 249524_at AT5G38520 [alpha/beta-Hydrolases superfamily protein] 0.115 -0.175
6 259108_at AT3G05540 [Methionine sulfoxide reductase (MSS4-like) family protein] 0.105 0.009
7 256140_at AT1G48650 [DEA(D/H)-box RNA helicase family protein] 0.098 0.011
8 252950_at AT4G38690 [PLC-like phosphodiesterases superfamily protein] 0.092 -0.026
9 250747_at AT5G05900 [UDP-Glycosyltransferase superfamily protein] 0.091 -0.183
10 248402_at AT5G52100 CRR1, chlororespiration reduction 1 0.088 0.129
11 253848_at AT4G28020 unknown 0.086 -0.024
12 264037_at AT2G03750 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.084 0.022
13 257051_at AT3G15270 SPL5, squamosa promoter binding protein-like 5 0.084 -0.029
14 246034_at AT5G08350 [GRAM domain-containing protein / ABA-responsive protein-related] 0.082 -0.163
15 260023_at AT1G30040 ATGA2OX2, gibberellin 2-oxidase, GA2OX2, gibberellin 2-oxidase, GA2OX2, GIBBERELLIN 2-OXIDASE 2 0.081 -0.088
16 262855_at AT1G20860 PHT1;8, phosphate transporter 1;8 0.077 0.030
17 249464_at AT5G39710 EMB2745, EMBRYO DEFECTIVE 2745 0.075 -0.049
18 245545_at AT4G15280 UGT71B5, UDP-glucosyl transferase 71B5 0.075 -0.025
19 263138_at AT1G65090 unknown 0.074 -0.037
20 255621_at AT4G01390 [TRAF-like family protein] 0.073 -0.473
21 245419_at AT4G17380 ATMSH4, ARABIDOPSIS MUTS HOMOLOG 4, MSH4, MUTS HOMOLOG 4, MSH4, MUTS-like protein 4 0.072 0.044
22 252975_s_at AT4G38430 ATROPGEF1, ROPGEF1, ROP (rho of plants) guanine nucleotide exchange factor 1 0.072 -0.054
23 255208_at AT4G07580 [pseudogene] 0.070 0.078
24 247956_at AT5G56970 ATCKX3, CKX3, cytokinin oxidase 3 0.070 -0.046
25 257421_at AT1G12030 unknown 0.069 0.010
26 252304_at AT3G49230 unknown 0.068 -0.007
27 246685_at AT5G33350 [pseudogene] 0.068 -0.030
28 266840_at AT2G26160 unknown 0.068 0.085
29 257860_at AT3G13062 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.067 -0.015
30 247814_at AT5G58310 ATMES18, ARABIDOPSIS THALIANA METHYL ESTERASE 18, MES18, methyl esterase 18 0.066 0.021
31 251841_at AT3G54980 [Pentatricopeptide repeat (PPR) superfamily protein] 0.066 -0.029
32 267216_at AT2G02620 [Cysteine/Histidine-rich C1 domain family protein] -0.089 -0.071
33 245503_at AT4G15650 unknown -0.083 0.037
34 249309_at AT5G41410 BEL1, BELL 1 -0.078 0.160
35 252572_at AT3G45290 ATMLO3, MILDEW RESISTANCE LOCUS O 3, MLO3, MILDEW RESISTANCE LOCUS O 3 -0.076 -0.090
36 256493_at AT1G31600 AtTRM9, Arabidopsis thaliana tRNA methyltransferase 9, TRM9, tRNA methyltransferase 9 -0.075 -0.035
37 246616_at AT5G36260 [Eukaryotic aspartyl protease family protein] -0.072 0.175
38 250161_at AT5G15240 [Transmembrane amino acid transporter family protein] -0.071 0.237
39 260688_at AT1G17665 unknown -0.069 0.014
40 249053_at AT5G44440 [FAD-binding Berberine family protein] -0.065 -0.059
41 245604_at AT4G14290 [alpha/beta-Hydrolases superfamily protein] -0.063 -0.196
42 258034_at AT3G21300 [RNA methyltransferase family protein] -0.062 -0.090
43 264895_at AT1G23100 [GroES-like family protein] -0.062 -0.174
44 262705_at AT1G16260 [Wall-associated kinase family protein] -0.060 -0.153
45 251598_at AT3G57600 [Integrase-type DNA-binding superfamily protein] -0.057 0.066
46 254479_at AT4G20350 [oxidoreductases] -0.056 0.005
47 248029_at AT5G55700 BAM4, beta-amylase 4, BMY6, BETA-AMYLASE 6 -0.055 0.044
48 257900_at AT3G28420 [Putative membrane lipoprotein] -0.054 0.024
49 263069_at AT2G17590 [Cysteine/Histidine-rich C1 domain family protein] -0.054 0.063
50 256710_at AT3G30350 GLV3, GOLVEN 3, RGF4, root meristem growth factor 4 -0.054 -0.044
51 258507_at AT3G06500 A/N-InvC, alkaline/neutral invertase C -0.054 0.089
52 251611_at AT3G57940 unknown -0.052 -0.086
53 262312_at AT1G70830 MLP28, MLP-like protein 28 -0.051 -0.055
54 249426_at AT5G39840 [ATP-dependent RNA helicase, mitochondrial, putative] -0.050 -0.152
55 262059_at AT1G80030 DJA7, DNA J protein A7 -0.050 -0.059
56 257441_at AT2G04020 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.049 -0.058
57 260292_at AT1G63680 APG13, ALBINO OR PALE-GREEN 13, ATMURE, MURE, PDE316, PIGMENT DEFECTIVE EMBRYO 316 -0.047 0.036
58 262074_at AT1G59670 ATGSTU15, glutathione S-transferase TAU 15, GSTU15, glutathione S-transferase TAU 15 -0.047 0.030
59 257982_at AT3G20780 ATTOP6B, topoisomerase 6 subunit B, BIN3, BRASSINOSTEROID INSENSITIVE 3, HYP6, ELONGATED HYPOCOTYL 6, RHL3, ROOT HAIRLESS 3, TOP6B, topoisomerase 6 subunit B -0.046 -0.106
60 257476_at AT1G80960 [F-box and Leucine Rich Repeat domains containing protein] -0.046 0.006
61 251545_at AT3G58810 ATMTP3, ARABIDOPSIS METAL TOLERANCE PROTEIN 3, ATMTPA2, MTP3, METAL TOLERANCE PROTEIN 3, MTPA2, metal tolerance protein A2 -0.046 -0.364