4.0:Information of module
ex2 flu dark 8hours/30 minute light
In comparison with Elevated CO2 LIMITING N NIGHT help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 2.767e-90
GO:0010243 response to organonitrogen compound BP 4.512e-89
GO:1901698 response to nitrogen compound BP 1.604e-72
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009627 systemic acquired resistance BP 4.214e-23
GO:0009814 defense response, incompatible interacti... BP 6.173e-22
GO:0002376 immune system process BP 4.523e-20
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ex2 flu dark 8hours/30 minute light		 Log2 signal ratio
Elevated CO2 LIMITING N NIGHT
1 258653_at AT3G09870 SAUR48, SMALL AUXIN UPREGULATED RNA 48 0.920 -0.089
2 256442_at AT3G10930 unknown 0.909 0.028
3 266010_at AT2G37430 ZAT11, zinc finger of Arabidopsis thaliana 11 0.906 -0.151
4 248799_at AT5G47230 ATERF-5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR- 5, ATERF5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5, AtMACD1, ERF102, ERF5, ethylene responsive element binding factor 5 0.892 0.006
5 245250_at AT4G17490 ATERF6, ethylene responsive element binding factor 6, ERF-6-6, ERF6, ethylene responsive element binding factor 6 0.874 -0.115
6 266800_at AT2G22880 [VQ motif-containing protein] 0.847 -0.009
7 266821_at AT2G44840 ATERF13, ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13, EREBP, ERF13, ethylene-responsive element binding factor 13 0.814 0.033
8 256306_at AT1G30370 DLAH, DAD1-like acylhydrolase 0.781 -0.114
9 263182_at AT1G05575 unknown 0.781 -0.060
10 261476_at AT1G14480 [Ankyrin repeat family protein] 0.763 -0.078
11 248448_at AT5G51190 [Integrase-type DNA-binding superfamily protein] 0.760 -0.176
12 247047_at AT5G66650 unknown 0.759 -0.144
13 246584_at AT5G14730 unknown 0.693 -0.028
14 245755_at AT1G35210 unknown 0.691 -0.043
15 248726_at AT5G47960 ATRABA4C, RAB GTPase homolog A4C, RABA4C, RAB GTPase homolog A4C, SMG1, SMALL MOLECULAR WEIGHT G-PROTEIN 1 0.649 -0.012
16 253044_at AT4G37290 unknown 0.643 -0.175
17 248164_at AT5G54490 PBP1, pinoid-binding protein 1 0.629 -0.103
18 262731_at AT1G16420 ATMC8, ARABIDOPSIS THALIANA METACASPASE 8, AtMCP2e, metacaspase 2e, MC8, metacaspase 8, MCP2e, metacaspase 2e 0.610 -0.139
19 245119_at AT2G41640 [Glycosyltransferase family 61 protein] 0.602 0.040
20 245711_at AT5G04340 C2H2, CZF2, COLD INDUCED ZINC FINGER PROTEIN 2, ZAT6, zinc finger of Arabidopsis thaliana 6 0.600 -0.022
21 248964_at AT5G45340 CYP707A3, cytochrome P450, family 707, subfamily A, polypeptide 3 0.592 -0.094
22 247543_at AT5G61600 ERF104, ethylene response factor 104 0.581 -0.001
23 261449_at AT1G21120 IGMT2, indole glucosinolate O-methyltransferase 2 0.578 -0.233
24 254408_at AT4G21390 B120 0.557 -0.083
25 254241_at AT4G23190 AT-RLK3, RECEPTOR LIKE PROTEIN KINASE 3, CRK11, cysteine-rich RLK (RECEPTOR-like protein kinase) 11 0.556 0.069
26 262382_at AT1G72920 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.553 -0.020
27 265725_at AT2G32030 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.551 -0.067
28 253643_at AT4G29780 unknown 0.527 -0.096
29 264758_at AT1G61340 AtFBS1, FBS1, F-box stress induced 1 0.526 -0.111
30 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 0.519 -0.046
31 252679_at AT3G44260 AtCAF1a, CCR4- associated factor 1a, CAF1a, CCR4- associated factor 1a 0.519 -0.047
32 254120_at AT4G24570 DIC2, dicarboxylate carrier 2 0.506 -0.102
33 250098_at AT5G17350 unknown 0.500 -0.036
34 259979_at AT1G76600 unknown 0.496 -0.029
35 258606_at AT3G02840 [ARM repeat superfamily protein] 0.486 -0.202
36 253632_at AT4G30430 TET9, tetraspanin9 0.481 -0.061
37 245041_at AT2G26530 AR781 0.474 -0.026
38 256522_at AT1G66160 ATCMPG1, CMPG1, CYS, MET, PRO, and GLY protein 1 0.473 0.009
39 248870_at AT5G46710 [PLATZ transcription factor family protein] 0.462 -0.067
40 251603_at AT3G57760 [Protein kinase superfamily protein] 0.454 -0.051
41 246777_at AT5G27420 ATL31, Arabidopsis toxicos en levadura 31, CNI1, carbon/nitrogen insensitive 1 0.453 -0.070
42 248392_at AT5G52050 [MATE efflux family protein] 0.448 -0.120
43 260135_at AT1G66400 CML23, calmodulin like 23 0.447 0.003
44 261648_at AT1G27730 STZ, salt tolerance zinc finger, ZAT10 0.447 -0.053
45 249770_at AT5G24110 ATWRKY30, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 30, WRKY30, WRKY DNA-binding protein 30 0.437 -0.131
46 267623_at AT2G39650 unknown 0.426 -0.011
47 252533_at AT3G46110 [LOCATED IN: plasma membrane] 0.426 -0.001
48 247177_at AT5G65300 unknown 0.423 0.010
49 263935_at AT2G35930 AtPUB23, PUB23, plant U-box 23 0.417 0.075
50 256526_at AT1G66090 [Disease resistance protein (TIR-NBS class)] 0.416 -0.033
51 262383_at AT1G72940 [Toll-Interleukin-Resistance (TIR) domain-containing protein] 0.416 -0.058
52 261470_at AT1G28370 ATERF11, ERF DOMAIN PROTEIN 11, ERF11, ERF domain protein 11 0.411 -0.019
53 257748_at AT3G18710 ATPUB29, ARABIDOPSIS THALIANA PLANT U-BOX 29, PUB29, plant U-box 29 0.406 0.015
54 254158_at AT4G24380 [INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process] 0.397 0.001
55 252045_at AT3G52450 AtPUB22, PUB22, plant U-box 22 0.396 0.041
56 258027_at AT3G19515 unknown -0.952 -0.015
57 256617_at AT3G22240 unknown -0.860 -0.025
58 258424_at AT3G16750 unknown -0.630 0.062
59 258113_at AT3G14650 CYP72A11, cytochrome P450, family 72, subfamily A, polypeptide 11 -0.624 -0.023
60 258434_at AT3G16770 ATEBP, ethylene-responsive element binding protein, EBP, ethylene-responsive element binding protein, ERF72, ETHYLENE RESPONSE FACTOR 72, RAP2.3, RELATED TO AP2 3 -0.614 -0.018
61 260116_at AT1G33960 AIG1, AVRRPT2-INDUCED GENE 1 -0.604 0.090
62 255341_at AT4G04500 CRK37, cysteine-rich RLK (RECEPTOR-like protein kinase) 37 -0.573 0.117
63 257008_at AT3G14210 ESM1, epithiospecifier modifier 1 -0.547 -0.025
64 262128_at AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 -0.532 -0.132
65 259559_at AT1G21240 WAK3, wall associated kinase 3 -0.517 0.200
66 254975_at AT4G10500 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.460 0.106
67 252068_at AT3G51440 [Calcium-dependent phosphotriesterase superfamily protein] -0.460 0.105
68 250302_at AT5G11920 AtcwINV6, 6-&1-fructan exohydrolase, cwINV6, 6-&1-fructan exohydrolase -0.456 0.116
69 262229_at AT1G68620 [alpha/beta-Hydrolases superfamily protein] -0.433 0.292
70 255630_at AT4G00700 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] -0.431 0.142
71 257067_at AT3G18270 pseudogene -0.398 0.027
72 260568_at AT2G43570 CHI, chitinase, putative -0.391 0.121
73 266292_at AT2G29350 SAG13, senescence-associated gene 13 -0.378 0.190
74 249454_at AT5G39520 unknown -0.363 -0.155
75 249850_at AT5G23240 DJC76, DNA J protein C76 -0.357 0.029
76 256012_at AT1G19250 FMO1, flavin-dependent monooxygenase 1 -0.356 0.154
77 250286_at AT5G13320 AtGH3.12, GDG1, GH3-LIKE DEFENSE GENE 1, GH3.12, GRETCHEN HAGEN 3.12, PBS3, AVRPPHB SUSCEPTIBLE 3, WIN3, HOPW1-1-INTERACTING 3 -0.349 -0.016
78 266385_at AT2G14610 ATPR1, PATHOGENESIS-RELATED GENE 1, PR 1, PATHOGENESIS-RELATED GENE 1, PR1, pathogenesis-related gene 1 -0.348 0.096
79 252403_at AT3G48080 [alpha/beta-Hydrolases superfamily protein] -0.343 0.034
80 257100_at AT3G25010 AtRLP41, receptor like protein 41, RLP41, receptor like protein 41 -0.343 0.095
81 245932_at AT5G09290 [Inositol monophosphatase family protein] -0.336 0.093
82 265161_at AT1G30900 BP80-3;3, binding protein of 80 kDa 3;3, VSR3;3, VACUOLAR SORTING RECEPTOR 3;3, VSR6, VACUOLAR SORTING RECEPTOR 6 -0.328 0.038
83 259925_at AT1G75040 PR-5, PR5, pathogenesis-related gene 5 -0.325 0.067
84 246302_at AT3G51860 ATCAX3, ATHCX1, CAX1-LIKE, CAX3, cation exchanger 3 -0.315 0.143
85 256883_at AT3G26440 unknown -0.312 0.221
86 248970_at AT5G45380 ATDUR3, DUR3, DEGRADATION OF UREA 3 -0.308 0.173
87 257540_at AT3G21520 AtDMP1, Arabidopsis thaliana DUF679 domain membrane protein 1, DMP1, DUF679 domain membrane protein 1 -0.293 -0.107
88 261077_at AT1G07430 AIP1, AKT1 interacting protein phosphatase 1, AtAIP1, HAI2, highly ABA-induced PP2C gene 2, HON, HONSU (Korean for abnormal drowsiness) -0.277 0.073
89 251625_at AT3G57260 AtBG2, AtPR2, BG2, BETA-1,3-GLUCANASE 2, BGL2, beta-1,3-glucanase 2, PR-2, PATHOGENESIS-RELATED PROTEIN 2, PR2, PATHOGENESIS-RELATED PROTEIN 2 -0.272 0.074
90 256969_at AT3G21080 [ABC transporter-related] -0.262 0.080
91 247618_at AT5G60280 LecRK-I.8, L-type lectin receptor kinase I.8 -0.262 0.087
92 258050_at AT3G16200 unknown -0.255 -0.030
93 259040_at AT3G09270 ATGSTU8, glutathione S-transferase TAU 8, GSTU8, glutathione S-transferase TAU 8 -0.253 0.153
94 264211_at AT1G22770 FB, GI, GIGANTEA -0.251 -0.001
95 259921_at AT1G72540 [Protein kinase superfamily protein] -0.251 0.071
96 245401_at AT4G17670 unknown -0.248 0.149
97 254500_at AT4G20110 BP80-3;1, binding protein of 80 kDa 3;1, VSR3;1, VACUOLAR SORTING RECEPTOR 3;1, VSR7, VACUOLAR SORTING RECEPTOR 7 -0.242 0.053
98 266070_at AT2G18660 AtPNP-A, PNP-A, plant natriuretic peptide A -0.239 0.027
99 258158_at AT3G17790 ATACP5, ATPAP17, PAP17, purple acid phosphatase 17 -0.228 0.069
100 248596_at AT5G49330 ATMYB111, ARABIDOPSIS MYB DOMAIN PROTEIN 111, MYB111, myb domain protein 111, PFG3, PRODUCTION OF FLAVONOL GLYCOSIDES 3 -0.228 0.039
101 251176_at AT3G63380 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] -0.227 0.102
102 265837_at AT2G14560 LURP1, LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA -0.225 -0.026
103 266383_at AT2G14580 ATPRB1, basic pathogenesis-related protein 1, PRB1, basic pathogenesis-related protein 1 -0.224 0.034
104 253776_at AT4G28390 AAC3, ADP/ATP carrier 3, ATAAC3 -0.222 0.073
105 258322_at AT3G22740 HMT3, homocysteine S-methyltransferase 3 -0.219 -0.053
106 258385_at AT3G15510 ANAC056, Arabidopsis NAC domain containing protein 56, ATNAC2, NAC domain containing protein 2, NAC2, NAC domain containing protein 2, NARS1, NAC-REGULATED SEED MORPHOLOGY 1 -0.212 0.059
107 261224_at AT1G20160 ATSBT5.2 -0.202 0.008
108 259058_at AT3G03470 CYP89A9, cytochrome P450, family 87, subfamily A, polypeptide 9 -0.200 0.041
109 262177_at AT1G74710 ATICS1, ARABIDOPSIS ISOCHORISMATE SYNTHASE 1, EDS16, ENHANCED DISEASE SUSCEPTIBILITY TO ERYSIPHE ORONTII 16, ICS1, ISOCHORISMATE SYNTHASE 1, SID2, SALICYLIC ACID INDUCTION DEFICIENT 2 -0.195 -0.017