4.0:Information of module
short 10-degree-
In comparison with Cs shoot help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009628 response to abiotic stimulus BP 2.883e-07
GO:0009266 response to temperature stimulus BP 1.269e-06
GO:0050896 response to stimulus BP 2.224e-06
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010155 regulation of proton transport BP 2.595e-05
GO:0051049 regulation of transport BP 4.926e-05
GO:0032879 regulation of localization BP 5.567e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
short 10-degree-		 Log2 signal ratio
Cs shoot
1 264511_at AT1G09350 AtGolS3, galactinol synthase 3, GolS3, galactinol synthase 3 1.104 -0.078
2 262113_at AT1G02820 AtLEA3, LEA3, late embryogenesis abundant 3 1.042 -0.037
3 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 0.837 -0.299
4 266532_at AT2G16890 [UDP-Glycosyltransferase superfamily protein] 0.698 -0.035
5 261187_at AT1G32860 [Glycosyl hydrolase superfamily protein] 0.616 -0.009
6 258893_at AT3G05660 AtRLP33, receptor like protein 33, RLP33, receptor like protein 33 0.606 -0.131
7 257876_at AT3G17130 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.606 -0.034
8 246922_at AT5G25110 CIPK25, CBL-interacting protein kinase 25, SnRK3.25, SNF1-RELATED PROTEIN KINASE 3.25 0.575 -0.076
9 265119_at AT1G62570 FMO GS-OX4, flavin-monooxygenase glucosinolate S-oxygenase 4 0.532 0.037
10 258349_at AT3G17609 HYH, HY5-homolog 0.482 -0.043
11 264436_at AT1G10370 ATGSTU17, GLUTATHIONE S-TRANSFERASE TAU 17, ERD9, EARLY-RESPONSIVE TO DEHYDRATION 9, GST30, GLUTATHIONE S-TRANSFERASE 30, GST30B, GLUTATHIONE S-TRANSFERASE 30B, GSTU17, GLUTATHIONE S-TRANSFERASE U17 0.454 -0.054
12 264953_at AT1G77120 ADH, ALCOHOL DEHYDROGENASE, ADH1, alcohol dehydrogenase 1, ATADH, ARABIDOPSIS THALIANA ALCOHOL DEHYDROGENASE, ATADH1 0.442 -0.159
13 262644_at AT1G62710 BETA-VPE, beta vacuolar processing enzyme, BETAVPE 0.431 -0.133
14 250665_at AT5G06980 LNK4, night light-inducible and clock-regulated 4 0.428 -0.017
15 264261_at AT1G09240 ATNAS3, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 3, NAS3, nicotianamine synthase 3 0.411 -0.030
16 251658_at AT3G57020 [Calcium-dependent phosphotriesterase superfamily protein] 0.407 -0.028
17 246125_at AT5G19875 unknown 0.404 -0.028
18 254085_at AT4G24960 ATHVA22D, ARABIDOPSIS THALIANA HVA22 HOMOLOGUE D, HVA22D, HVA22 homologue D 0.400 0.019
19 249677_at AT5G35970 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.399 -0.041
20 267036_at AT2G38465 unknown 0.390 -0.021
21 245427_at AT4G17550 AtG3Pp4, glycerol-3-phosphate permease 4, G3Pp4, glycerol-3-phosphate permease 4 0.388 -0.028
22 251753_at AT3G55760 unknown 0.382 -0.093
23 257237_at AT3G14890 [phosphoesterase] 0.373 0.018
24 267429_at AT2G34850 MEE25, maternal effect embryo arrest 25 0.346 -0.016
25 254073_at AT4G25500 At-RS40, arginine/serine-rich splicing factor 40, AT-SRP40, ATRSP35, ARABIDOPSIS THALIANA ARGININE/SERINE-RICH SPLICING FACTOR 35, ATRSP40, RS40, arginine/serine-rich splicing factor 40, RSP35, arginine/serine-rich splicing factor 35 0.345 -0.091
26 260903_at AT1G02460 [Pectin lyase-like superfamily protein] 0.342 -0.058
27 266832_at AT2G30040 MAPKKK14, mitogen-activated protein kinase kinase kinase 14 0.334 -0.019
28 252997_at AT4G38400 ATEXLA2, expansin-like A2, ATEXPL2, ATHEXP BETA 2.2, EXLA2, expansin-like A2, EXPL2, EXPANSIN L2 0.333 0.008
29 245998_at AT5G20830 ASUS1, atsus1, SUS1, sucrose synthase 1 0.317 -0.061
30 258562_at AT3G05980 unknown 0.304 0.029
31 261651_at AT1G27760 ATSAT32, SALT-TOLERANCE 32, SAT32, SALT-TOLERANCE 32 0.303 -0.009
32 253841_at AT4G27830 AtBGLU10, BGLU10, beta glucosidase 10 0.301 0.011
33 246597_at AT5G14760 AO, L-aspartate oxidase, FIN4, FLAGELLIN-INSENSITIVE 4 0.294 -0.008
34 250151_at AT5G14570 ATNRT2.7, high affinity nitrate transporter 2.7, NRT2.7, high affinity nitrate transporter 2.7 0.292 0.034
35 252127_at AT3G50960 PLP3a, phosducin-like protein 3 homolog 0.287 0.028
36 258239_at AT3G27690 LHCB2, LIGHT-HARVESTING CHLOROPHYLL B-BINDING 2, LHCB2.3, photosystem II light harvesting complex gene 2.3, LHCB2.4 0.283 -0.011
37 250053_at AT5G17850 [Sodium/calcium exchanger family protein] 0.281 0.070
38 252956_at AT4G38580 ATFP6, farnesylated protein 6, FP6, farnesylated protein 6, HIPP26, HEAVY METAL ASSOCIATED ISOPRENYLATED PLANT PROTEIN 26 0.273 -0.030
39 249091_at AT5G43860 ATCLH2, ARABIDOPSIS THALIANA CHLOROPHYLLASE 2, CLH2, chlorophyllase 2 0.271 0.001
40 249134_at AT5G43150 unknown 0.268 -0.011
41 258719_at AT3G09540 [Pectin lyase-like superfamily protein] 0.266 -0.036
42 246468_at AT5G17050 UGT78D2, UDP-glucosyl transferase 78D2 0.265 -0.002
43 253806_at AT4G28270 ATRMA2, RMA2, RING membrane-anchor 2 -0.618 -0.002
44 253305_at AT4G33666 unknown -0.575 0.012
45 266899_at AT2G34620 [Mitochondrial transcription termination factor family protein] -0.544 -0.002
46 263106_at AT2G05160 [CCCH-type zinc fingerfamily protein with RNA-binding domain] -0.537 -0.012
47 257615_at AT3G26510 [Octicosapeptide/Phox/Bem1p family protein] -0.495 -0.003
48 259104_at AT3G02170 LNG2, LONGIFOLIA2, TRM1, TON1 Recruiting Motif 1 -0.486 -0.011
49 257964_at AT3G19850 [Phototropic-responsive NPH3 family protein] -0.428 0.087
50 260431_at AT1G68190 BBX27, B-box domain protein 27 -0.400 0.012
51 266357_at AT2G32290 BAM6, beta-amylase 6, BMY5, BETA-AMYLASE 5 -0.380 -0.010
52 266106_at AT2G45170 ATATG8E, AUTOPHAGY 8E, ATG8E, AUTOPHAGY 8E -0.378 0.019
53 246275_at AT4G36540 BEE2, BR enhanced expression 2 -0.353 0.010
54 264507_at AT1G09415 NIMIN-3, NIM1-interacting 3 -0.351 0.041
55 260317_at AT1G63800 UBC5, ubiquitin-conjugating enzyme 5 -0.346 -0.008
56 265175_at AT1G23480 ATCSLA03, cellulose synthase-like A3, ATCSLA3, CSLA03, CSLA03, cellulose synthase-like A3, CSLA3, CELLULOSE SYNTHASE-LIKE A3 -0.334 0.074
57 257474_at AT1G80850 [DNA glycosylase superfamily protein] -0.312 0.031
58 255774_at AT1G18620 TRM3, TON1 Recruiting Motif 3 -0.300 0.000
59 264898_at AT1G23205 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.300 -0.027
60 253061_at AT4G37610 BT5, BTB and TAZ domain protein 5 -0.291 0.001
61 248460_at AT5G50915 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.282 0.029
62 257880_at AT3G16910 AAE7, acyl-activating enzyme 7, ACN1, ACETATE NON-UTILIZING 1 -0.280 0.024
63 259500_at AT1G15740 [Leucine-rich repeat family protein] -0.279 0.004
64 259616_at AT1G47960 ATC/VIF1, CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1, C/VIF1, cell wall / vacuolar inhibitor of fructosidase 1 -0.279 -0.051
65 256569_at AT3G19550 unknown -0.278 0.025
66 264931_at AT1G60590 [Pectin lyase-like superfamily protein] -0.278 -0.022
67 247684_at AT5G59670 [Leucine-rich repeat protein kinase family protein] -0.274 -0.058
68 250017_at AT5G18140 DJC69, DNA J protein A69 -0.269 -0.004
69 254851_at AT4G12010 [Disease resistance protein (TIR-NBS-LRR class) family] -0.266 0.002
70 267518_at AT2G30500 NET4B, Networked 4B -0.265 -0.017
71 248329_at AT5G52780 unknown -0.260 -0.014
72 249694_at AT5G35790 G6PD1, glucose-6-phosphate dehydrogenase 1 -0.248 -0.004
73 260146_at AT1G52770 [Phototropic-responsive NPH3 family protein] -0.245 -0.044
74 249008_at AT5G44680 [DNA glycosylase superfamily protein] -0.243 0.001
75 247848_at AT5G58120 [Disease resistance protein (TIR-NBS-LRR class) family] -0.242 0.074
76 255088_at AT4G09350 CRRJ, CHLORORESPIRATORY REDUCTION J, DJC75, DNA J protein C75, NdhT, NADH dehydrogenase-like complex T -0.237 -0.027
77 259017_at AT3G07310 unknown -0.236 -0.019
78 245362_at AT4G17460 HAT1, JAB, JAIBA -0.235 0.034
79 254705_at AT4G17870 PYR1, PYRABACTIN RESISTANCE 1, RCAR11, regulatory component of ABA receptor 11 -0.234 0.040
80 261032_at AT1G17430 [alpha/beta-Hydrolases superfamily protein] -0.232 0.033
81 257422_at AT1G11940 [Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein] -0.223 0.052
82 263875_at AT2G21970 SEP2, stress enhanced protein 2 -0.220 -0.008
83 264990_at AT1G27210 [ARM repeat superfamily protein] -0.218 -0.019