4.0:Information of module
long 8-degree-
In comparison with WT cold help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010264 myo-inositol hexakisphosphate biosynthet... BP 3.940e-10
GO:0033517 myo-inositol hexakisphosphate metabolic ... BP 3.940e-10
GO:0032958 inositol phosphate biosynthetic process BP 5.661e-10
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009628 response to abiotic stimulus BP 3.889e-08
GO:0006091 generation of precursor metabolites and ... BP 2.951e-06
GO:0015996 chlorophyll catabolic process BP 4.713e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
long 8-degree-		 Log2 signal ratio
WT cold
1 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN 0.995 0.972
2 264400_at AT1G61800 ATGPT2, ARABIDOPSIS GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, GPT2, glucose-6-phosphate/phosphate translocator 2 0.895 1.288
3 245306_at AT4G14690 ELIP2, EARLY LIGHT-INDUCIBLE PROTEIN 2 0.819 0.900
4 254818_at AT4G12470 AZI1, azelaic acid induced 1 0.800 0.474
5 266532_at AT2G16890 [UDP-Glycosyltransferase superfamily protein] 0.784 1.036
6 248467_at AT5G50800 AtSWEET13, SWEET13 0.708 0.865
7 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 0.644 0.912
8 262644_at AT1G62710 BETA-VPE, beta vacuolar processing enzyme, BETAVPE 0.615 1.132
9 262050_at AT1G80130 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.588 1.091
10 256057_at AT1G07180 ATNDI1, ARABIDOPSIS THALIANA INTERNAL NON-PHOSPHORYLATING NAD ( P ) H DEHYDROGENASE, NDA1, alternative NAD(P)H dehydrogenase 1 0.581 0.099
11 260727_at AT1G48100 [Pectin lyase-like superfamily protein] 0.515 0.929
12 247739_at AT5G59240 [Ribosomal protein S8e family protein] 0.382 0.391
13 256924_at AT3G29590 AT5MAT 0.374 0.485
14 245624_at AT4G14090 [UDP-Glycosyltransferase superfamily protein] 0.353 0.458
15 251090_at AT5G01340 AtmSFC1, mSFC1, mitochondrial succinate-fumarate carrier 1 0.339 0.574
16 245628_at AT1G56650 ATMYB75, MYB DOMAIN PROTEIN 75, MYB75, MYELOBLASTOSIS PROTEIN 75, PAP1, production of anthocyanin pigment 1, SIAA1, SUC-INDUCED ANTHOCYANIN ACCUMULATION 1 0.326 0.879
17 265093_at AT1G03905 ABCI19, ATP-binding cassette I19 0.326 0.672
18 250992_at AT5G02260 ATEXP9, ATEXPA9, expansin A9, ATHEXP ALPHA 1.10, EXP9, EXPA9, expansin A9 0.325 0.186
19 265999_at AT2G24100 ASG1, ALTERED SEED GERMINATION 1 0.324 0.252
20 260903_at AT1G02460 [Pectin lyase-like superfamily protein] 0.313 0.280
21 261335_at AT1G44800 SIAR1, Siliques Are Red 1, UMAMIT18, Usually multiple acids move in and out Transporters 18 0.312 -0.009
22 250083_at AT5G17220 ATGSTF12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12, GST26, GLUTATHIONE S-TRANSFERASE 26, GSTF12, glutathione S-transferase phi 12, TT19, TRANSPARENT TESTA 19 0.297 0.620
23 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 0.291 0.160
24 248185_at AT5G54060 UF3GT, UDP-glucose:flavonoid 3-o-glucosyltransferase, UGT79B1, UDP-glucosyl transferase 79B1 0.284 0.352
25 249645_at AT5G36910 THI2.2, thionin 2.2 0.279 0.029
26 251668_at AT3G57010 [Calcium-dependent phosphotriesterase superfamily protein] 0.277 0.464
27 254543_at AT4G19810 ChiC, class V chitinase 0.268 0.316
28 265962_at AT2G37460 UMAMIT12, Usually multiple acids move in and out Transporters 12 0.265 0.197
29 257237_at AT3G14890 [phosphoesterase] 0.263 0.579
30 256751_at AT3G27170 ATCLC-B, CLC-B, chloride channel B 0.258 0.089
31 245367_at AT4G16265 NRPB9B, NRPD9B, NRPE9B 0.256 0.301
32 253252_at AT4G34740 ASE2, GLN phosphoribosyl pyrophosphate amidotransferase 2, ATASE2, GLN phosphoribosyl pyrophosphate amidotransferase 2, ATPURF2, CIA1, CHLOROPLAST IMPORT APPARATUS 1, DOV1, DIFFERENTIAL DEVELOPMENT OF VASCULAR ASSOCIATED CELLS 0.249 0.387
33 247232_at AT5G64940 ATATH13, ARABIDOPSIS THALIANA ABC2 HOMOLOG 13, ATH13, ABC2 homolog 13, ATOSA1, A. THALIANA OXIDATIVE STRESS-RELATED ABC1-LIKE PROTEIN 1, OSA1, OXIDATIVE STRESS-RELATED ABC1-LIKE PROTEIN 1 0.246 0.057
34 262136_at AT1G77850 ARF17, auxin response factor 17 0.241 0.389
35 251928_at AT3G53980 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.235 0.165
36 259275_at AT3G01060 unknown 0.232 0.084
37 262875_at AT1G64970 G-TMT, gamma-tocopherol methyltransferase, TMT1, VTE4, VITAMIN E DEFICIENT 4 0.231 0.292
38 254043_at AT4G25990 CIL 0.227 0.013
39 265842_at AT2G35700 ATERF38, ERF FAMILY PROTEIN 38, ERF38, ERF family protein 38 0.225 0.344
40 257252_at AT3G24170 ATGR1, glutathione-disulfide reductase, GR1, glutathione-disulfide reductase 0.224 0.233
41 257253_at AT3G24190 [Protein kinase superfamily protein] 0.219 0.354
42 247776_at AT5G58700 ATPLC4, PLC4, phosphatidylinositol-speciwc phospholipase C4 0.215 0.542
43 263805_at AT2G40400 unknown 0.212 0.153
44 250971_at AT5G02810 APRR7, PRR7, pseudo-response regulator 7 0.212 0.074
45 264767_at AT1G61380 SD1-29, S-domain-1 29 0.212 0.295
46 252412_at AT3G47295 unknown 0.211 0.100
47 260025_at AT1G30070 [SGS domain-containing protein] 0.210 0.235
48 250758_at AT5G06000 ATEIF3G2, ARABIDOPSIS THALIANA EUKARYOTIC TRANSLATION INITIATION FACTOR 3G2, EIF3G2, eukaryotic translation initiation factor 3G2 0.208 0.261
49 249942_at AT5G22300 AtNIT4, NITRILASE 4, NIT4, nitrilase 4 0.205 0.328
50 245936_at AT5G19850 [alpha/beta-Hydrolases superfamily protein] 0.204 0.131
51 252997_at AT4G38400 ATEXLA2, expansin-like A2, ATEXPL2, ATHEXP BETA 2.2, EXLA2, expansin-like A2, EXPL2, EXPANSIN L2 0.203 0.330
52 246554_at AT5G15450 APG6, ALBINO AND PALE GREEN 6, AtCLPB3, CLPB-P, CASEIN LYTIC PROTEINASE B-P, CLPB3, casein lytic proteinase B3 0.203 0.261
53 265768_at AT2G48020 [Major facilitator superfamily protein] 0.202 -0.174
54 252607_at AT3G44990 AtXTH31, ATXTR8, XTH31, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31, XTR8, xyloglucan endo-transglycosylase-related 8 0.201 0.382
55 264057_at AT2G28550 RAP2.7, related to AP2.7, TOE1, TARGET OF EARLY ACTIVATION TAGGED (EAT) 1 0.199 0.275
56 260308_at AT1G70610 ABCB26, ATP-binding cassette B26, ATTAP1, transporter associated with antigen processing protein 1, TAP1, transporter associated with antigen processing protein 1 0.198 0.181
57 254054_at AT4G25320 AHL3, AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 3 0.197 0.308
58 256020_at AT1G58290 AtHEMA1, Arabidopsis thaliana hemA 1, HEMA1 0.195 0.019
59 246566_at AT5G14940 [Major facilitator superfamily protein] 0.193 0.194
60 256049_at AT1G07010 AtSLP1, SLP1, Shewenella-like protein phosphatase 1 0.188 0.087
61 258056_at AT3G29010 [Biotin/lipoate A/B protein ligase family] 0.179 0.002
62 260075_at AT1G73700 [MATE efflux family protein] 0.178 0.681
63 253824_at AT4G27940 ATMTM1, ARABIDOPSIS MANGANESE TRACKING FACTOR FOR MITOCHONDRIAL SOD2, MTM1, manganese tracking factor for mitochondrial SOD2 0.177 0.401
64 264941_at AT1G60680 [NAD(P)-linked oxidoreductase superfamily protein] 0.176 0.080
65 264824_at AT1G03420 Sadhu4-2, sadhu non-coding retrotransposon 4-2 0.175 0.166
66 260221_at AT1G74670 GASA6, GA-stimulated Arabidopsis 6 -0.866 -1.682
67 249775_at AT5G24160 SQE6, squalene monoxygenase 6 -0.647 -0.778
68 266357_at AT2G32290 BAM6, beta-amylase 6, BMY5, BETA-AMYLASE 5 -0.601 -0.280
69 267265_at AT2G22980 SCPL13, serine carboxypeptidase-like 13 -0.598 -1.164
70 245275_at AT4G15210 AT-BETA-AMY, ATBETA-AMY, ARABIDOPSIS THALIANA BETA-AMYLASE, BAM5, beta-amylase 5, BMY1, RAM1, REDUCED BETA AMYLASE 1 -0.489 0.034
71 265698_at AT2G32160 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.436 -0.409
72 245637_at AT1G25230 [Calcineurin-like metallo-phosphoesterase superfamily protein] -0.401 -0.769
73 256096_at AT1G13650 unknown -0.396 -0.887
74 264507_at AT1G09415 NIMIN-3, NIM1-interacting 3 -0.390 -0.858
75 258468_at AT3G06070 unknown -0.386 -0.876
76 253697_at AT4G29700 [Alkaline-phosphatase-like family protein] -0.362 -0.273
77 252114_at AT3G51450 [Calcium-dependent phosphotriesterase superfamily protein] -0.361 -0.321
78 260983_at AT1G53560 [Ribosomal protein L18ae family] -0.356 -0.692
79 259104_at AT3G02170 LNG2, LONGIFOLIA2, TRM1, TON1 Recruiting Motif 1 -0.353 -0.746
80 259783_at AT1G29510 SAUR67, SMALL AUXIN UPREGULATED RNA 67 -0.353 -0.214
81 246114_at AT5G20250 DIN10, DARK INDUCIBLE 10, RS6, raffinose synthase 6 -0.352 -0.722
82 261086_at AT1G17460 TRFL3, TRF-like 3 -0.334 -0.005
83 264100_at AT1G78970 ATLUP1, ARABIDOPSIS THALIANA LUPEOL SYNTHASE 1, LUP1, lupeol synthase 1 -0.327 -0.298
84 258063_at AT3G14620 CYP72A8, cytochrome P450, family 72, subfamily A, polypeptide 8 -0.325 -0.347
85 249732_at AT5G24420 PGL5, 6-phosphogluconolactonase 5 -0.322 -0.673
86 254553_at AT4G19530 [disease resistance protein (TIR-NBS-LRR class) family] -0.318 -0.432
87 267083_at AT2G41100 ATCAL4, ARABIDOPSIS THALIANA CALMODULIN LIKE 4, TCH3, TOUCH 3 -0.313 -0.501
88 262236_at AT1G48330 unknown -0.312 0.040
89 267425_at AT2G34810 [FAD-binding Berberine family protein] -0.307 -0.194
90 249439_at AT5G40020 [Pathogenesis-related thaumatin superfamily protein] -0.300 -0.218
91 267336_at AT2G19310 [HSP20-like chaperones superfamily protein] -0.300 -0.242
92 252529_at AT3G46490 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.275 -0.277
93 265902_at AT2G25590 [Plant Tudor-like protein] -0.275 -0.445
94 247293_at AT5G64510 TIN1, tunicamycin induced 1 -0.271 -0.005
95 249777_at AT5G24210 [alpha/beta-Hydrolases superfamily protein] -0.269 -0.358
96 249895_at AT5G22500 FAR1, fatty acid reductase 1 -0.259 -0.280
97 256226_at AT1G56280 ATDI19, drought-induced 19, DI19, drought-induced 19 -0.257 -0.288
98 262607_at AT1G13990 unknown -0.256 -0.227
99 258609_at AT3G02910 [AIG2-like (avirulence induced gene) family protein] -0.251 -0.013
100 250751_at AT5G05890 [UDP-Glycosyltransferase superfamily protein] -0.248 -0.230
101 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 -0.239 -0.804
102 262698_at AT1G75960 [AMP-dependent synthetase and ligase family protein] -0.234 -0.488
103 248657_at AT5G48570 ATFKBP65, FKBP65, ROF2 -0.232 -0.135
104 246462_at AT5G16940 [carbon-sulfur lyases] -0.230 -0.451
105 254110_at AT4G25260 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.225 -0.289
106 266781_at AT2G28940 [Protein kinase superfamily protein] -0.223 -0.148
107 261016_at AT1G26560 BGLU40, beta glucosidase 40 -0.223 -0.279
108 247540_at AT5G61590 [Integrase-type DNA-binding superfamily protein] -0.218 -0.548
109 246962_s_at AT5G24800 ATBZIP9, ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 9, BZIP9, basic leucine zipper 9, BZO2H2, BASIC LEUCINE ZIPPER O2 HOMOLOG 2 -0.215 -0.341
110 249008_at AT5G44680 [DNA glycosylase superfamily protein] -0.209 -0.489
111 252011_at AT3G52720 ACA1, alpha carbonic anhydrase 1, ATACA1, A. THALIANA ALPHA CARBONIC ANHYDRASE 1, CAH1, CARBONIC ANHYDRASE 1 -0.208 -0.525
112 260254_at AT1G74210 AtGDPD5, GDPD5, glycerophosphodiester phosphodiesterase 5 -0.206 -0.025
113 258037_at AT3G21230 4CL5, 4-coumarate:CoA ligase 5 -0.204 -0.123
114 249072_at AT5G44060 unknown -0.199 -0.296
115 246917_at AT5G25280 [serine-rich protein-related] -0.198 -0.219
116 253971_at AT4G26530 AtFBA5, FBA5, fructose-bisphosphate aldolase 5 -0.198 -0.128
117 258375_at AT3G17470 ATCRSH, CRSH, Ca2+-activated RelA/spot homolog -0.195 -0.276
118 259924_at AT1G72740 [Homeodomain-like/winged-helix DNA-binding family protein] -0.195 -0.124
119 245524_at AT4G15920 AtSWEET17, SWEET17 -0.193 -0.344
120 251704_at AT3G56360 unknown -0.193 -0.073
121 262232_at AT1G68600 [Aluminium activated malate transporter family protein] -0.193 -0.010
122 249408_at AT5G40330 ATMYB23, MYB DOMAIN PROTEIN 23, ATMYBRTF, MYB23, myb domain protein 23 -0.192 -0.068
123 248905_at AT5G46250 AtLARP6a, LARP6a, La related protein 6a -0.191 -0.182
124 257868_at AT3G25070 RIN4, RPM1 interacting protein 4 -0.190 -0.323
125 262871_at AT1G65010 [INVOLVED IN: flower development] -0.186 -0.089
126 263668_at AT1G04350 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.186 -0.285
127 266707_at AT2G03310 unknown -0.183 -0.247
128 259383_at AT3G16470 JAL35, jacalin-related lectin 35, JR1, JASMONATE RESPONSIVE 1 -0.180 -0.141
129 246012_at AT5G10650 [RING/U-box superfamily protein] -0.179 -0.060
130 259629_at AT1G56510 ADR2, ACTIVATED DISEASE RESISTANCE 2, WRR4, WHITE RUST RESISTANCE 4 -0.176 -0.204