4.0:Information of module
long 8-degree-
In comparison with Col-O low light help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010264 myo-inositol hexakisphosphate biosynthet... BP 3.940e-10
GO:0033517 myo-inositol hexakisphosphate metabolic ... BP 3.940e-10
GO:0032958 inositol phosphate biosynthetic process BP 5.661e-10
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009628 response to abiotic stimulus BP 3.889e-08
GO:0006091 generation of precursor metabolites and ... BP 2.951e-06
GO:0015996 chlorophyll catabolic process BP 4.713e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
long 8-degree-		 Log2 signal ratio
Col-O low light
1 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN 0.995 -0.787
2 264400_at AT1G61800 ATGPT2, ARABIDOPSIS GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, GPT2, glucose-6-phosphate/phosphate translocator 2 0.895 -0.689
3 245306_at AT4G14690 ELIP2, EARLY LIGHT-INDUCIBLE PROTEIN 2 0.819 -0.920
4 254818_at AT4G12470 AZI1, azelaic acid induced 1 0.800 -0.081
5 266532_at AT2G16890 [UDP-Glycosyltransferase superfamily protein] 0.784 -0.496
6 248467_at AT5G50800 AtSWEET13, SWEET13 0.708 -0.569
7 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 0.644 0.319
8 262644_at AT1G62710 BETA-VPE, beta vacuolar processing enzyme, BETAVPE 0.615 -0.328
9 262050_at AT1G80130 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.588 -0.183
10 256057_at AT1G07180 ATNDI1, ARABIDOPSIS THALIANA INTERNAL NON-PHOSPHORYLATING NAD ( P ) H DEHYDROGENASE, NDA1, alternative NAD(P)H dehydrogenase 1 0.581 -0.226
11 260727_at AT1G48100 [Pectin lyase-like superfamily protein] 0.515 -0.498
12 247739_at AT5G59240 [Ribosomal protein S8e family protein] 0.382 -0.302
13 256924_at AT3G29590 AT5MAT 0.374 -0.381
14 245624_at AT4G14090 [UDP-Glycosyltransferase superfamily protein] 0.353 -0.285
15 251090_at AT5G01340 AtmSFC1, mSFC1, mitochondrial succinate-fumarate carrier 1 0.339 -0.183
16 245628_at AT1G56650 ATMYB75, MYB DOMAIN PROTEIN 75, MYB75, MYELOBLASTOSIS PROTEIN 75, PAP1, production of anthocyanin pigment 1, SIAA1, SUC-INDUCED ANTHOCYANIN ACCUMULATION 1 0.326 -0.572
17 265093_at AT1G03905 ABCI19, ATP-binding cassette I19 0.326 -0.427
18 250992_at AT5G02260 ATEXP9, ATEXPA9, expansin A9, ATHEXP ALPHA 1.10, EXP9, EXPA9, expansin A9 0.325 -0.142
19 265999_at AT2G24100 ASG1, ALTERED SEED GERMINATION 1 0.324 -0.055
20 260903_at AT1G02460 [Pectin lyase-like superfamily protein] 0.313 -0.048
21 261335_at AT1G44800 SIAR1, Siliques Are Red 1, UMAMIT18, Usually multiple acids move in and out Transporters 18 0.312 -0.038
22 250083_at AT5G17220 ATGSTF12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12, GST26, GLUTATHIONE S-TRANSFERASE 26, GSTF12, glutathione S-transferase phi 12, TT19, TRANSPARENT TESTA 19 0.297 -0.220
23 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 0.291 -0.160
24 248185_at AT5G54060 UF3GT, UDP-glucose:flavonoid 3-o-glucosyltransferase, UGT79B1, UDP-glucosyl transferase 79B1 0.284 -0.216
25 249645_at AT5G36910 THI2.2, thionin 2.2 0.279 -0.127
26 251668_at AT3G57010 [Calcium-dependent phosphotriesterase superfamily protein] 0.277 -0.141
27 254543_at AT4G19810 ChiC, class V chitinase 0.268 0.023
28 265962_at AT2G37460 UMAMIT12, Usually multiple acids move in and out Transporters 12 0.265 0.017
29 257237_at AT3G14890 [phosphoesterase] 0.263 -0.193
30 256751_at AT3G27170 ATCLC-B, CLC-B, chloride channel B 0.258 -0.083
31 245367_at AT4G16265 NRPB9B, NRPD9B, NRPE9B 0.256 -0.110
32 253252_at AT4G34740 ASE2, GLN phosphoribosyl pyrophosphate amidotransferase 2, ATASE2, GLN phosphoribosyl pyrophosphate amidotransferase 2, ATPURF2, CIA1, CHLOROPLAST IMPORT APPARATUS 1, DOV1, DIFFERENTIAL DEVELOPMENT OF VASCULAR ASSOCIATED CELLS 0.249 -0.301
33 247232_at AT5G64940 ATATH13, ARABIDOPSIS THALIANA ABC2 HOMOLOG 13, ATH13, ABC2 homolog 13, ATOSA1, A. THALIANA OXIDATIVE STRESS-RELATED ABC1-LIKE PROTEIN 1, OSA1, OXIDATIVE STRESS-RELATED ABC1-LIKE PROTEIN 1 0.246 -0.031
34 262136_at AT1G77850 ARF17, auxin response factor 17 0.241 -0.097
35 251928_at AT3G53980 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.235 0.007
36 259275_at AT3G01060 unknown 0.232 -0.059
37 262875_at AT1G64970 G-TMT, gamma-tocopherol methyltransferase, TMT1, VTE4, VITAMIN E DEFICIENT 4 0.231 -0.130
38 254043_at AT4G25990 CIL 0.227 0.013
39 265842_at AT2G35700 ATERF38, ERF FAMILY PROTEIN 38, ERF38, ERF family protein 38 0.225 -0.255
40 257252_at AT3G24170 ATGR1, glutathione-disulfide reductase, GR1, glutathione-disulfide reductase 0.224 -0.103
41 257253_at AT3G24190 [Protein kinase superfamily protein] 0.219 -0.259
42 247776_at AT5G58700 ATPLC4, PLC4, phosphatidylinositol-speciwc phospholipase C4 0.215 -0.064
43 263805_at AT2G40400 unknown 0.212 -0.122
44 250971_at AT5G02810 APRR7, PRR7, pseudo-response regulator 7 0.212 0.104
45 264767_at AT1G61380 SD1-29, S-domain-1 29 0.212 -0.139
46 252412_at AT3G47295 unknown 0.211 -0.183
47 260025_at AT1G30070 [SGS domain-containing protein] 0.210 -0.012
48 250758_at AT5G06000 ATEIF3G2, ARABIDOPSIS THALIANA EUKARYOTIC TRANSLATION INITIATION FACTOR 3G2, EIF3G2, eukaryotic translation initiation factor 3G2 0.208 -0.161
49 249942_at AT5G22300 AtNIT4, NITRILASE 4, NIT4, nitrilase 4 0.205 -0.438
50 245936_at AT5G19850 [alpha/beta-Hydrolases superfamily protein] 0.204 -0.246
51 252997_at AT4G38400 ATEXLA2, expansin-like A2, ATEXPL2, ATHEXP BETA 2.2, EXLA2, expansin-like A2, EXPL2, EXPANSIN L2 0.203 -0.336
52 246554_at AT5G15450 APG6, ALBINO AND PALE GREEN 6, AtCLPB3, CLPB-P, CASEIN LYTIC PROTEINASE B-P, CLPB3, casein lytic proteinase B3 0.203 -0.122
53 265768_at AT2G48020 [Major facilitator superfamily protein] 0.202 -0.015
54 252607_at AT3G44990 AtXTH31, ATXTR8, XTH31, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31, XTR8, xyloglucan endo-transglycosylase-related 8 0.201 -0.060
55 264057_at AT2G28550 RAP2.7, related to AP2.7, TOE1, TARGET OF EARLY ACTIVATION TAGGED (EAT) 1 0.199 -0.089
56 260308_at AT1G70610 ABCB26, ATP-binding cassette B26, ATTAP1, transporter associated with antigen processing protein 1, TAP1, transporter associated with antigen processing protein 1 0.198 -0.065
57 254054_at AT4G25320 AHL3, AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 3 0.197 -0.054
58 256020_at AT1G58290 AtHEMA1, Arabidopsis thaliana hemA 1, HEMA1 0.195 -0.057
59 246566_at AT5G14940 [Major facilitator superfamily protein] 0.193 -0.034
60 256049_at AT1G07010 AtSLP1, SLP1, Shewenella-like protein phosphatase 1 0.188 -0.011
61 258056_at AT3G29010 [Biotin/lipoate A/B protein ligase family] 0.179 -0.068
62 260075_at AT1G73700 [MATE efflux family protein] 0.178 -0.082
63 253824_at AT4G27940 ATMTM1, ARABIDOPSIS MANGANESE TRACKING FACTOR FOR MITOCHONDRIAL SOD2, MTM1, manganese tracking factor for mitochondrial SOD2 0.177 -0.300
64 264941_at AT1G60680 [NAD(P)-linked oxidoreductase superfamily protein] 0.176 0.040
65 264824_at AT1G03420 Sadhu4-2, sadhu non-coding retrotransposon 4-2 0.175 -0.094
66 260221_at AT1G74670 GASA6, GA-stimulated Arabidopsis 6 -0.866 0.373
67 249775_at AT5G24160 SQE6, squalene monoxygenase 6 -0.647 0.201
68 266357_at AT2G32290 BAM6, beta-amylase 6, BMY5, BETA-AMYLASE 5 -0.601 0.158
69 267265_at AT2G22980 SCPL13, serine carboxypeptidase-like 13 -0.598 0.634
70 245275_at AT4G15210 AT-BETA-AMY, ATBETA-AMY, ARABIDOPSIS THALIANA BETA-AMYLASE, BAM5, beta-amylase 5, BMY1, RAM1, REDUCED BETA AMYLASE 1 -0.489 -0.185
71 265698_at AT2G32160 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.436 0.087
72 245637_at AT1G25230 [Calcineurin-like metallo-phosphoesterase superfamily protein] -0.401 0.427
73 256096_at AT1G13650 unknown -0.396 0.340
74 264507_at AT1G09415 NIMIN-3, NIM1-interacting 3 -0.390 0.359
75 258468_at AT3G06070 unknown -0.386 0.412
76 253697_at AT4G29700 [Alkaline-phosphatase-like family protein] -0.362 0.138
77 252114_at AT3G51450 [Calcium-dependent phosphotriesterase superfamily protein] -0.361 0.063
78 260983_at AT1G53560 [Ribosomal protein L18ae family] -0.356 0.151
79 259104_at AT3G02170 LNG2, LONGIFOLIA2, TRM1, TON1 Recruiting Motif 1 -0.353 0.342
80 259783_at AT1G29510 SAUR67, SMALL AUXIN UPREGULATED RNA 67 -0.353 0.028
81 246114_at AT5G20250 DIN10, DARK INDUCIBLE 10, RS6, raffinose synthase 6 -0.352 0.133
82 261086_at AT1G17460 TRFL3, TRF-like 3 -0.334 0.050
83 264100_at AT1G78970 ATLUP1, ARABIDOPSIS THALIANA LUPEOL SYNTHASE 1, LUP1, lupeol synthase 1 -0.327 -0.117
84 258063_at AT3G14620 CYP72A8, cytochrome P450, family 72, subfamily A, polypeptide 8 -0.325 0.154
85 249732_at AT5G24420 PGL5, 6-phosphogluconolactonase 5 -0.322 0.233
86 254553_at AT4G19530 [disease resistance protein (TIR-NBS-LRR class) family] -0.318 0.176
87 267083_at AT2G41100 ATCAL4, ARABIDOPSIS THALIANA CALMODULIN LIKE 4, TCH3, TOUCH 3 -0.313 -0.094
88 262236_at AT1G48330 unknown -0.312 -0.004
89 267425_at AT2G34810 [FAD-binding Berberine family protein] -0.307 0.228
90 249439_at AT5G40020 [Pathogenesis-related thaumatin superfamily protein] -0.300 0.198
91 267336_at AT2G19310 [HSP20-like chaperones superfamily protein] -0.300 0.155
92 252529_at AT3G46490 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.275 0.128
93 265902_at AT2G25590 [Plant Tudor-like protein] -0.275 0.435
94 247293_at AT5G64510 TIN1, tunicamycin induced 1 -0.271 0.295
95 249777_at AT5G24210 [alpha/beta-Hydrolases superfamily protein] -0.269 0.104
96 249895_at AT5G22500 FAR1, fatty acid reductase 1 -0.259 -0.170
97 256226_at AT1G56280 ATDI19, drought-induced 19, DI19, drought-induced 19 -0.257 0.126
98 262607_at AT1G13990 unknown -0.256 0.145
99 258609_at AT3G02910 [AIG2-like (avirulence induced gene) family protein] -0.251 -0.080
100 250751_at AT5G05890 [UDP-Glycosyltransferase superfamily protein] -0.248 0.061
101 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 -0.239 0.781
102 262698_at AT1G75960 [AMP-dependent synthetase and ligase family protein] -0.234 0.318
103 248657_at AT5G48570 ATFKBP65, FKBP65, ROF2 -0.232 0.289
104 246462_at AT5G16940 [carbon-sulfur lyases] -0.230 0.083
105 254110_at AT4G25260 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.225 -0.175
106 266781_at AT2G28940 [Protein kinase superfamily protein] -0.223 0.100
107 261016_at AT1G26560 BGLU40, beta glucosidase 40 -0.223 0.107
108 247540_at AT5G61590 [Integrase-type DNA-binding superfamily protein] -0.218 0.721
109 246962_s_at AT5G24800 ATBZIP9, ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 9, BZIP9, basic leucine zipper 9, BZO2H2, BASIC LEUCINE ZIPPER O2 HOMOLOG 2 -0.215 0.071
110 249008_at AT5G44680 [DNA glycosylase superfamily protein] -0.209 0.263
111 252011_at AT3G52720 ACA1, alpha carbonic anhydrase 1, ATACA1, A. THALIANA ALPHA CARBONIC ANHYDRASE 1, CAH1, CARBONIC ANHYDRASE 1 -0.208 0.005
112 260254_at AT1G74210 AtGDPD5, GDPD5, glycerophosphodiester phosphodiesterase 5 -0.206 0.008
113 258037_at AT3G21230 4CL5, 4-coumarate:CoA ligase 5 -0.204 0.126
114 249072_at AT5G44060 unknown -0.199 0.149
115 246917_at AT5G25280 [serine-rich protein-related] -0.198 0.237
116 253971_at AT4G26530 AtFBA5, FBA5, fructose-bisphosphate aldolase 5 -0.198 0.073
117 258375_at AT3G17470 ATCRSH, CRSH, Ca2+-activated RelA/spot homolog -0.195 0.169
118 259924_at AT1G72740 [Homeodomain-like/winged-helix DNA-binding family protein] -0.195 0.079
119 245524_at AT4G15920 AtSWEET17, SWEET17 -0.193 0.122
120 251704_at AT3G56360 unknown -0.193 0.300
121 262232_at AT1G68600 [Aluminium activated malate transporter family protein] -0.193 0.211
122 249408_at AT5G40330 ATMYB23, MYB DOMAIN PROTEIN 23, ATMYBRTF, MYB23, myb domain protein 23 -0.192 0.160
123 248905_at AT5G46250 AtLARP6a, LARP6a, La related protein 6a -0.191 0.100
124 257868_at AT3G25070 RIN4, RPM1 interacting protein 4 -0.190 0.123
125 262871_at AT1G65010 [INVOLVED IN: flower development] -0.186 0.039
126 263668_at AT1G04350 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.186 0.023
127 266707_at AT2G03310 unknown -0.183 0.193
128 259383_at AT3G16470 JAL35, jacalin-related lectin 35, JR1, JASMONATE RESPONSIVE 1 -0.180 0.057
129 246012_at AT5G10650 [RING/U-box superfamily protein] -0.179 0.138
130 259629_at AT1G56510 ADR2, ACTIVATED DISEASE RESISTANCE 2, WRR4, WHITE RUST RESISTANCE 4 -0.176 -0.044