4.0:Information of module
long 12-degree-
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0046148 pigment biosynthetic process BP 6.718e-10
GO:0042440 pigment metabolic process BP 5.845e-09
GO:0009668 plastid membrane organization BP 1.916e-06
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009628 response to abiotic stimulus BP 4.636e-04
GO:0006457 protein folding BP 5.346e-04
GO:0015994 chlorophyll metabolic process BP 5.961e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
long 12-degree-		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN 0.878 0.183
2 245306_at AT4G14690 ELIP2, EARLY LIGHT-INDUCIBLE PROTEIN 2 0.694 -0.104
3 266532_at AT2G16890 [UDP-Glycosyltransferase superfamily protein] 0.525 -0.170
4 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 0.482 0.028
5 253496_at AT4G31870 ATGPX7, GLUTATHIONE PEROXIDASE 7, GPX7, glutathione peroxidase 7 0.446 0.060
6 256057_at AT1G07180 ATNDI1, ARABIDOPSIS THALIANA INTERNAL NON-PHOSPHORYLATING NAD ( P ) H DEHYDROGENASE, NDA1, alternative NAD(P)H dehydrogenase 1 0.417 0.150
7 252629_at AT3G44970 [Cytochrome P450 superfamily protein] 0.369 0.084
8 256924_at AT3G29590 AT5MAT 0.356 0.306
9 245628_at AT1G56650 ATMYB75, MYB DOMAIN PROTEIN 75, MYB75, MYELOBLASTOSIS PROTEIN 75, PAP1, production of anthocyanin pigment 1, SIAA1, SUC-INDUCED ANTHOCYANIN ACCUMULATION 1 0.331 -0.028
10 248185_at AT5G54060 UF3GT, UDP-glucose:flavonoid 3-o-glucosyltransferase, UGT79B1, UDP-glucosyl transferase 79B1 0.316 0.022
11 262050_at AT1G80130 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.303 -0.130
12 250083_at AT5G17220 ATGSTF12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12, GST26, GLUTATHIONE S-TRANSFERASE 26, GSTF12, glutathione S-transferase phi 12, TT19, TRANSPARENT TESTA 19 0.292 -0.033
13 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 0.286 -0.254
14 262518_at AT1G17170 ATGSTU24, glutathione S-transferase TAU 24, GST, Arabidopsis thaliana Glutathione S-transferase (class tau) 24, GSTU24, glutathione S-transferase TAU 24 0.266 -0.087
15 251229_at AT3G62740 BGLU7, beta glucosidase 7 0.251 -0.082
16 261335_at AT1G44800 SIAR1, Siliques Are Red 1, UMAMIT18, Usually multiple acids move in and out Transporters 18 0.234 0.098
17 249645_at AT5G36910 THI2.2, thionin 2.2 0.223 -0.112
18 259550_at AT1G35230 AGP5, arabinogalactan protein 5 0.218 0.035
19 259275_at AT3G01060 unknown 0.189 -0.072
20 265962_at AT2G37460 UMAMIT12, Usually multiple acids move in and out Transporters 12 0.185 0.137
21 249942_at AT5G22300 AtNIT4, NITRILASE 4, NIT4, nitrilase 4 0.181 -0.202
22 257252_at AT3G24170 ATGR1, glutathione-disulfide reductase, GR1, glutathione-disulfide reductase 0.178 -0.007
23 265999_at AT2G24100 ASG1, ALTERED SEED GERMINATION 1 0.169 0.043
24 263096_at AT2G16060 AHB1, hemoglobin 1, ARATH GLB1, ATGLB1, GLB1, CLASS I HEMOGLOBIN, HB1, hemoglobin 1, NSHB1 0.163 0.283
25 265954_at AT2G37260 ATWRKY44, DSL1, DR. STRANGELOVE 1, TTG2, TRANSPARENT TESTA GLABRA 2, WRKY44 0.162 0.091
26 251090_at AT5G01340 AtmSFC1, mSFC1, mitochondrial succinate-fumarate carrier 1 0.162 -0.109
27 245367_at AT4G16265 NRPB9B, NRPD9B, NRPE9B 0.160 -0.128
28 246554_at AT5G15450 APG6, ALBINO AND PALE GREEN 6, AtCLPB3, CLPB-P, CASEIN LYTIC PROTEINASE B-P, CLPB3, casein lytic proteinase B3 0.150 0.093
29 245368_at AT4G15510 PPD1, PsbP-Domain Protein1 0.149 0.187
30 259783_at AT1G29510 SAUR67, SMALL AUXIN UPREGULATED RNA 67 -0.373 0.135
31 266357_at AT2G32290 BAM6, beta-amylase 6, BMY5, BETA-AMYLASE 5 -0.321 -0.058
32 246114_at AT5G20250 DIN10, DARK INDUCIBLE 10, RS6, raffinose synthase 6 -0.307 -0.003
33 261086_at AT1G17460 TRFL3, TRF-like 3 -0.266 -0.137
34 249035_at AT5G44190 ATGLK2, GLK2, GOLDEN2-like 2, GPRI2, GBF'S PRO-RICH REGION-INTERACTING FACTOR 2 -0.239 0.051
35 247540_at AT5G61590 [Integrase-type DNA-binding superfamily protein] -0.225 -0.137
36 256096_at AT1G13650 unknown -0.212 0.043
37 249895_at AT5G22500 FAR1, fatty acid reductase 1 -0.207 0.238
38 257506_at AT1G29440 SAUR63, SMALL AUXIN UP RNA 63 -0.205 0.051
39 262830_at AT1G14700 ATPAP3, PAP3, purple acid phosphatase 3 -0.198 0.017
40 252529_at AT3G46490 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.197 -0.045
41 254848_at AT4G11960 PGRL1B, PGR5-like B -0.189 0.098
42 246943_at AT5G25440 [Protein kinase superfamily protein] -0.185 -0.018
43 254688_at AT4G13830 DJC26, DNA J protein C26, J20, DNAJ-like 20 -0.179 -0.153
44 254553_at AT4G19530 [disease resistance protein (TIR-NBS-LRR class) family] -0.177 0.038
45 266005_at AT2G37340 AT-RS2Z33, arginine/serine-rich zinc knuckle-containing protein 33, ATRSZ33, ARGININE/SERINE-RICH ZINC KNUCKLE-CONTAINING PROTEIN 33, RS2Z33, arginine/serine-rich zinc knuckle-containing protein 33, RSZ33, arginine/serine-rich zinc knuckle-containing protein 33 -0.172 0.082
46 263765_at AT2G21540 ATSFH3, SEC14-LIKE 3, SFH3, SEC14-like 3 -0.171 0.143
47 267336_at AT2G19310 [HSP20-like chaperones superfamily protein] -0.164 -0.010
48 255298_at AT4G04840 ATMSRB6, methionine sulfoxide reductase B6, MSRB6, methionine sulfoxide reductase B6 -0.161 -0.005
49 248912_at AT5G45670 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.158 0.201
50 262698_at AT1G75960 [AMP-dependent synthetase and ligase family protein] -0.150 -0.110
51 264788_at AT2G17880 DJC24, DNA J protein C24 -0.143 -0.116
52 265066_at AT1G03870 FLA9, FASCICLIN-like arabinoogalactan 9 -0.136 0.239
53 260012_at AT1G67865 unknown -0.135 -0.049
54 264435_at AT1G10360 ATGSTU18, glutathione S-transferase TAU 18, GST29, GLUTATHIONE S-TRANSFERASE 29, GSTU18, glutathione S-transferase TAU 18 -0.131 -0.028
55 255957_at AT1G22160 unknown -0.130 -0.024
56 250891_at AT5G04530 KCS19, 3-ketoacyl-CoA synthase 19 -0.129 0.103
57 258375_at AT3G17470 ATCRSH, CRSH, Ca2+-activated RelA/spot homolog -0.128 0.193