4.0:Information of module
long 10-degree-
In comparison with Col-O low light help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042440 pigment metabolic process BP 3.031e-12
GO:0046148 pigment biosynthetic process BP 1.164e-11
GO:0009718 anthocyanin-containing compound biosynth... BP 1.300e-08
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0016052 carbohydrate catabolic process BP 9.444e-08
GO:0000272 polysaccharide catabolic process BP 1.182e-07
GO:0005982 starch metabolic process BP 1.851e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
long 10-degree-		 Log2 signal ratio
Col-O low light
1 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN 0.989 -0.787
2 245306_at AT4G14690 ELIP2, EARLY LIGHT-INDUCIBLE PROTEIN 2 0.828 -0.920
3 264400_at AT1G61800 ATGPT2, ARABIDOPSIS GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, GPT2, glucose-6-phosphate/phosphate translocator 2 0.772 -0.689
4 266532_at AT2G16890 [UDP-Glycosyltransferase superfamily protein] 0.710 -0.496
5 254818_at AT4G12470 AZI1, azelaic acid induced 1 0.701 -0.081
6 262644_at AT1G62710 BETA-VPE, beta vacuolar processing enzyme, BETAVPE 0.563 -0.328
7 256057_at AT1G07180 ATNDI1, ARABIDOPSIS THALIANA INTERNAL NON-PHOSPHORYLATING NAD ( P ) H DEHYDROGENASE, NDA1, alternative NAD(P)H dehydrogenase 1 0.540 -0.226
8 250662_at AT5G07010 ATST2A, ARABIDOPSIS THALIANA SULFOTRANSFERASE 2A, ST2A, sulfotransferase 2A 0.531 -0.705
9 253496_at AT4G31870 ATGPX7, GLUTATHIONE PEROXIDASE 7, GPX7, glutathione peroxidase 7 0.511 -0.857
10 262050_at AT1G80130 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.482 -0.183
11 245624_at AT4G14090 [UDP-Glycosyltransferase superfamily protein] 0.397 -0.285
12 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 0.337 -0.160
13 248185_at AT5G54060 UF3GT, UDP-glucose:flavonoid 3-o-glucosyltransferase, UGT79B1, UDP-glucosyl transferase 79B1 0.334 -0.216
14 262518_at AT1G17170 ATGSTU24, glutathione S-transferase TAU 24, GST, Arabidopsis thaliana Glutathione S-transferase (class tau) 24, GSTU24, glutathione S-transferase TAU 24 0.328 -0.234
15 250083_at AT5G17220 ATGSTF12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12, GST26, GLUTATHIONE S-TRANSFERASE 26, GSTF12, glutathione S-transferase phi 12, TT19, TRANSPARENT TESTA 19 0.315 -0.220
16 246464_at AT5G16980 [Zinc-binding dehydrogenase family protein] 0.311 -0.327
17 265093_at AT1G03905 ABCI19, ATP-binding cassette I19 0.307 -0.427
18 249645_at AT5G36910 THI2.2, thionin 2.2 0.281 -0.127
19 250992_at AT5G02260 ATEXP9, ATEXPA9, expansin A9, ATHEXP ALPHA 1.10, EXP9, EXPA9, expansin A9 0.272 -0.142
20 265999_at AT2G24100 ASG1, ALTERED SEED GERMINATION 1 0.269 -0.055
21 254543_at AT4G19810 ChiC, class V chitinase 0.250 0.023
22 253227_at AT4G35030 [Protein kinase superfamily protein] 0.247 0.094
23 249134_at AT5G43150 unknown 0.233 -0.191
24 249942_at AT5G22300 AtNIT4, NITRILASE 4, NIT4, nitrilase 4 0.225 -0.438
25 245367_at AT4G16265 NRPB9B, NRPD9B, NRPE9B 0.224 -0.110
26 259275_at AT3G01060 unknown 0.222 -0.059
27 250155_at AT5G15160 BHLH134, BASIC HELIX-LOOP-HELIX PROTEIN 134, BNQ2, BANQUO 2 0.219 -0.311
28 257237_at AT3G14890 [phosphoesterase] 0.219 -0.193
29 265025_at AT1G24575 unknown 0.215 -0.090
30 257252_at AT3G24170 ATGR1, glutathione-disulfide reductase, GR1, glutathione-disulfide reductase 0.212 -0.103
31 257253_at AT3G24190 [Protein kinase superfamily protein] 0.211 -0.259
32 252607_at AT3G44990 AtXTH31, ATXTR8, XTH31, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31, XTR8, xyloglucan endo-transglycosylase-related 8 0.202 -0.060
33 263805_at AT2G40400 unknown 0.197 -0.122
34 246554_at AT5G15450 APG6, ALBINO AND PALE GREEN 6, AtCLPB3, CLPB-P, CASEIN LYTIC PROTEINASE B-P, CLPB3, casein lytic proteinase B3 0.195 -0.122
35 258232_at AT3G27750 EMB3123, EMBRYO DEFECTIVE 3123, THA8, Thylakoid Assembly 8 0.195 -0.182
36 265768_at AT2G48020 [Major facilitator superfamily protein] 0.192 -0.015
37 245936_at AT5G19850 [alpha/beta-Hydrolases superfamily protein] 0.191 -0.246
38 264217_at AT1G60190 AtPUB19, PUB19, plant U-box 19 0.191 -0.517
39 247776_at AT5G58700 ATPLC4, PLC4, phosphatidylinositol-speciwc phospholipase C4 0.191 -0.064
40 267549_at AT2G32640 [Lycopene beta/epsilon cyclase protein] 0.190 -0.145
41 265954_at AT2G37260 ATWRKY44, DSL1, DR. STRANGELOVE 1, TTG2, TRANSPARENT TESTA GLABRA 2, WRKY44 0.186 -0.180
42 264186_at AT1G54570 PES1, phytyl ester synthase 1 0.183 -0.171
43 260308_at AT1G70610 ABCB26, ATP-binding cassette B26, ATTAP1, transporter associated with antigen processing protein 1, TAP1, transporter associated with antigen processing protein 1 0.181 -0.065
44 253809_at AT4G28320 AtMAN5, MAN5, endo-beta-mannase 5 0.176 -0.061
45 256751_at AT3G27170 ATCLC-B, CLC-B, chloride channel B 0.165 -0.083
46 267265_at AT2G22980 SCPL13, serine carboxypeptidase-like 13 -0.569 0.634
47 266357_at AT2G32290 BAM6, beta-amylase 6, BMY5, BETA-AMYLASE 5 -0.458 0.158
48 259783_at AT1G29510 SAUR67, SMALL AUXIN UPREGULATED RNA 67 -0.418 0.028
49 256096_at AT1G13650 unknown -0.347 0.340
50 246114_at AT5G20250 DIN10, DARK INDUCIBLE 10, RS6, raffinose synthase 6 -0.342 0.133
51 258468_at AT3G06070 unknown -0.336 0.412
52 259327_at AT3G16460 JAL34, jacalin-related lectin 34 -0.310 0.066
53 248793_at AT5G47240 atnudt8, nudix hydrolase homolog 8, NUDT8, nudix hydrolase homolog 8 -0.277 0.170
54 250828_at AT5G05250 unknown -0.266 0.448
55 254705_at AT4G17870 PYR1, PYRABACTIN RESISTANCE 1, RCAR11, regulatory component of ABA receptor 11 -0.265 0.156
56 254553_at AT4G19530 [disease resistance protein (TIR-NBS-LRR class) family] -0.261 0.176
57 250751_at AT5G05890 [UDP-Glycosyltransferase superfamily protein] -0.251 0.061
58 267425_at AT2G34810 [FAD-binding Berberine family protein] -0.246 0.228
59 249895_at AT5G22500 FAR1, fatty acid reductase 1 -0.243 -0.170
60 260983_at AT1G53560 [Ribosomal protein L18ae family] -0.242 0.151
61 256226_at AT1G56280 ATDI19, drought-induced 19, DI19, drought-induced 19 -0.238 0.126
62 258063_at AT3G14620 CYP72A8, cytochrome P450, family 72, subfamily A, polypeptide 8 -0.236 0.154
63 262698_at AT1G75960 [AMP-dependent synthetase and ligase family protein] -0.233 0.318
64 246943_at AT5G25440 [Protein kinase superfamily protein] -0.220 0.055
65 266106_at AT2G45170 ATATG8E, AUTOPHAGY 8E, ATG8E, AUTOPHAGY 8E -0.219 0.437
66 266781_at AT2G28940 [Protein kinase superfamily protein] -0.207 0.100
67 254239_at AT4G23400 PIP1;5, plasma membrane intrinsic protein 1;5, PIP1D -0.203 0.148
68 249408_at AT5G40330 ATMYB23, MYB DOMAIN PROTEIN 23, ATMYBRTF, MYB23, myb domain protein 23 -0.196 0.160
69 254110_at AT4G25260 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.195 -0.175
70 246917_at AT5G25280 [serine-rich protein-related] -0.194 0.237
71 247043_at AT5G66880 SNRK2-3, SUCROSE NONFERMENTING 1 (SNF1)-RELATED PROTEIN KINASE 2-3, SNRK2.3, sucrose nonfermenting 1(SNF1)-related protein kinase 2.3, SRK2I -0.193 0.168
72 256458_at AT1G75220 AtERDL6, ERDL6, ERD6-like 6 -0.192 0.129
73 249008_at AT5G44680 [DNA glycosylase superfamily protein] -0.190 0.263
74 252114_at AT3G51450 [Calcium-dependent phosphotriesterase superfamily protein] -0.177 0.063
75 248487_at AT5G51070 CLPD, ERD1, EARLY RESPONSIVE TO DEHYDRATION 1, SAG15, SENESCENCE ASSOCIATED GENE 15 -0.174 0.111
76 262309_at AT1G70820 [phosphoglucomutase, putative / glucose phosphomutase, putative] -0.168 0.158
77 258375_at AT3G17470 ATCRSH, CRSH, Ca2+-activated RelA/spot homolog -0.167 0.169
78 249035_at AT5G44190 ATGLK2, GLK2, GOLDEN2-like 2, GPRI2, GBF'S PRO-RICH REGION-INTERACTING FACTOR 2 -0.166 0.088
79 245602_at AT4G14270 unknown -0.163 0.248
80 250012_x_at AT5G18060 SAUR23, SMALL AUXIN UP RNA 23 -0.163 -0.292
81 266984_at AT2G39570 ACR9, ACT domain repeats 9 -0.158 0.154
82 248905_at AT5G46250 AtLARP6a, LARP6a, La related protein 6a -0.155 0.100
83 249072_at AT5G44060 unknown -0.154 0.149
84 247657_at AT5G59845 [Gibberellin-regulated family protein] -0.153 0.159
85 257868_at AT3G25070 RIN4, RPM1 interacting protein 4 -0.147 0.123
86 262357_at AT1G73040 [Mannose-binding lectin superfamily protein] -0.145 0.012
87 262456_at AT1G11260 ATSTP1, SUGAR TRANSPORTER 1, STP1, sugar transporter 1 -0.144 0.168
88 255939_at AT1G12730 [GPI transamidase subunit PIG-U] -0.143 0.095
89 249904_at AT5G22700 [F-box/RNI-like/FBD-like domains-containing protein] -0.142 0.177