4.0:Information of module
whole roots -Fe 24hour
In comparison with Leafminer damaged seedlings help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010039 response to iron ion BP 5.553e-10
GO:0071281 cellular response to iron ion BP 1.282e-06
GO:1990267 response to transition metal nanoparticl... BP 1.900e-06
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0031667 response to nutrient levels BP 1.319e-06
GO:0009991 response to extracellular stimulus BP 1.880e-06
GO:0007154 cell communication BP 1.914e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
whole roots -Fe 24hour		 Log2 signal ratio
Leafminer damaged seedlings
1 262091_at AT1G56160 ATMYB72, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 72, MYB72, myb domain protein 72 1.104 0.033
2 253502_at AT4G31940 CYP82C4, cytochrome P450, family 82, subfamily C, polypeptide 4 1.072 0.022
3 246860_at AT5G25840 unknown 0.878 -0.442
4 257135_at AT3G12900 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.827 0.016
5 257689_at AT3G12820 AtMYB10, myb domain protein 10, MYB10, myb domain protein 10 0.644 -0.010
6 246998_at AT5G67370 CGLD27, CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27 0.583 -0.308
7 267565_at AT2G30750 CYP71A12, cytochrome P450, family 71, subfamily A, polypeptide 12 0.528 0.852
8 264821_at AT1G03470 NET3A, Networked 3A 0.526 -0.216
9 264710_at AT1G09790 COBL6, COBRA-like protein 6 precursor 0.516 0.015
10 261449_at AT1G21120 IGMT2, indole glucosinolate O-methyltransferase 2 0.511 0.186
11 250152_at AT5G15120 unknown 0.490 -0.041
12 251293_at AT3G61930 unknown 0.443 0.635
13 254976_at AT4G10510 [Subtilase family protein] 0.426 -0.004
14 250248_at AT5G13740 ZIF1, zinc induced facilitator 1 0.381 -0.077
15 249752_at AT5G24660 LSU2, RESPONSE TO LOW SULFUR 2 0.377 -0.503
16 254020_at AT4G25700 B1, BCH1, BETA CAROTENOID HYDROXYLASE 1, BETA-OHASE 1, beta-hydroxylase 1, chy1 0.370 -0.359
17 252145_at AT3G51200 SAUR18, SMALL AUXIN UPREGULATED RNA 18 0.353 0.026
18 249881_at AT5G23190 CYP86B1, cytochrome P450, family 86, subfamily B, polypeptide 1 0.342 0.039
19 263985_at AT2G42750 DJC77, DNA J protein C77 0.338 -0.194
20 261006_at AT1G26410 [FAD-binding Berberine family protein] 0.322 0.505
21 260308_at AT1G70610 ABCB26, ATP-binding cassette B26, ATTAP1, transporter associated with antigen processing protein 1, TAP1, transporter associated with antigen processing protein 1 0.320 -0.123
22 252502_at AT3G46900 COPT2, copper transporter 2 0.287 -0.222
23 265260_at AT2G43000 ANAC042, NAC domain containing protein 42, JUB1, JUNGBRUNNEN 1, NAC042, NAC domain containing protein 42 0.279 0.329
24 264680_at AT1G65510 unknown 0.270 0.432
25 259116_at AT3G01350 [Major facilitator superfamily protein] 0.246 -0.424
26 259439_at AT1G01480 ACS2, 1-amino-cyclopropane-1-carboxylate synthase 2, AT-ACC2 0.230 0.563
27 257062_at AT3G18290 BTS, BRUTUS, EMB2454, embryo defective 2454 0.228 -0.372
28 247570_at AT5G61250 AtGUS1, glucuronidase 1, GUS1, glucuronidase 1 0.223 -0.012
29 245401_at AT4G17670 unknown 0.223 -0.171
30 250670_at AT5G06860 ATPGIP1, POLYGALACTURONASE INHIBITING PROTEIN 1, PGIP1, polygalacturonase inhibiting protein 1 0.223 0.629
31 247001_at AT5G67330 ATNRAMP4, ARABIDOPSIS THALIANA NATURAL RESISTANCE ASSOCIATED MACROPHAGE PROTEIN 4, NRAMP4, natural resistance associated macrophage protein 4 0.217 -0.199
32 246614_at AT5G35410 ATSOS2, SALT OVERLY SENSITIVE 2, CIPK24, CBL-INTERACTING PROTEIN KINASE 24, SNRK3.11, SNF1-RELATED PROTEIN KINASE 3.11, SOS2, SALT OVERLY SENSITIVE 2 0.202 0.137
33 267045_at AT2G34180 ATWL2, WPL4-LIKE 2, CIPK13, CBL-interacting protein kinase 13, SnRK3.7, SNF1-RELATED PROTEIN KINASE 3.7, WL2, WPL4-LIKE 2 -0.581 -0.028
34 255648_at AT4G00910 [Aluminium activated malate transporter family protein] -0.442 -0.019
35 252238_at AT3G49960 [Peroxidase superfamily protein] -0.394 -0.057
36 263558_at AT2G16380 [Sec14p-like phosphatidylinositol transfer family protein] -0.392 -0.087
37 266326_at AT2G46650 ATCB5-C, ARABIDOPSIS CYTOCHROME B5 ISOFORM C, B5 #1, CB5-C, cytochrome B5 isoform C, CYTB5-C -0.385 0.204
38 260451_at AT1G72360 AtERF73, ERF73, ethylene response factor 73, HRE1, HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 1 -0.314 0.001
39 262507_at AT1G11330 [S-locus lectin protein kinase family protein] -0.312 -0.104
40 267128_at AT2G23620 ATMES1, ARABIDOPSIS THALIANA METHYL ESTERASE 1, MES1, methyl esterase 1 -0.311 0.064
41 246807_at AT5G27100 ATGLR2.1, ARABIDOPSIS THALIANA GLUTAMATE RECEPTOR 2.1, GLR2.1, glutamate receptor 2.1 -0.310 -0.026
42 266336_at AT2G32270 ZIP3, zinc transporter 3 precursor -0.310 -0.075
43 249358_at AT5G40510 [Sucrase/ferredoxin-like family protein] -0.285 0.103
44 266247_at AT2G27660 [Cysteine/Histidine-rich C1 domain family protein] -0.281 0.294
45 248400_at AT5G52020 [Integrase-type DNA-binding superfamily protein] -0.262 0.280
46 245151_at AT2G47550 [Plant invertase/pectin methylesterase inhibitor superfamily] -0.259 0.543
47 259813_at AT1G49860 ATGSTF14, glutathione S-transferase (class phi) 14, GSTF14, glutathione S-transferase (class phi) 14 -0.254 -0.068
48 249566_at AT5G38450 CYP735A1, cytochrome P450, family 735, subfamily A, polypeptide 1 -0.247 0.063
49 251863_at AT3G54870 ARK1, ARMADILLO REPEAT-CONTAINING KINESIN 1, AtKINUc, Arabidopsis thaliana KINESIN Ungrouped clade, gene A, CAE1, CA-ROP2 ENHANCER 1, MRH2, MORPHOGENESIS OF ROOT HAIR 2 -0.243 -0.027
50 252510_at AT3G46270 [receptor protein kinase-related] -0.242 -0.003
51 254256_at AT4G23180 CRK10, cysteine-rich RLK (RECEPTOR-like protein kinase) 10, RLK4 -0.225 0.187
52 255140_x_at AT4G08410 [Proline-rich extensin-like family protein] -0.222 -0.052
53 259028_at AT3G09290 TAC1, telomerase activator1 -0.216 -0.063
54 262883_at AT1G64780 AMT1;2, ammonium transporter 1;2, ATAMT1;2, ammonium transporter 1;2 -0.214 -0.559
55 249493_at AT5G39080 [HXXXD-type acyl-transferase family protein] -0.211 -0.353
56 265475_at AT2G15620 ATHNIR, ARABIDOPSIS THALIANA NITRITE REDUCTASE, NIR, NITRITE REDUCTASE, NIR1, nitrite reductase 1 -0.211 -0.080
57 245946_at AT5G19580 [glyoxal oxidase-related protein] -0.209 0.108
58 260433_at AT1G68170 UMAMIT23, Usually multiple acids move in and out Transporters 23 -0.208 0.054
59 250633_at AT5G07460 ATMSRA2, ARABIDOPSIS THALIANA METHIONINE SULFOXIDE REDUCTASE 2, PMSR2, peptidemethionine sulfoxide reductase 2 -0.205 0.197
60 264898_at AT1G23205 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.203 -0.797
61 255110_at AT4G08770 Prx37, peroxidase 37 -0.201 0.792
62 256283_at AT3G12540 unknown -0.197 0.002
63 253354_at AT4G33370 [DEA(D/H)-box RNA helicase family protein] -0.197 -0.001