4.0:Information of module
root longitudinal zone-4 -Fe
In comparison with 21h-DC3000 avrRpm1 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006811 ion transport BP 5.106e-07
GO:0009987 cellular process BP 1.470e-06
GO:0055076 transition metal ion homeostasis BP 2.347e-06
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006412 translation BP 2.773e-15
GO:0042254 ribosome biogenesis BP 5.801e-12
GO:0022613 ribonucleoprotein complex biogenesis BP 7.734e-12
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
root longitudinal zone-4 -Fe		 Log2 signal ratio
21h-DC3000 avrRpm1
1 254550_at AT4G19690 ATIRT1, ARABIDOPSIS IRON-REGULATED TRANSPORTER 1, IRT1, iron-regulated transporter 1 1.645 -0.047
2 262373_at AT1G73120 unknown 1.380 -0.062
3 251293_at AT3G61930 unknown 1.373 0.031
4 262091_at AT1G56160 ATMYB72, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 72, MYB72, myb domain protein 72 1.332 0.081
5 245692_at AT5G04150 BHLH101 1.301 -0.096
6 250983_at AT5G02780 GSTL1, glutathione transferase lambda 1 1.165 -0.181
7 257135_at AT3G12900 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 1.147 0.017
8 251620_at AT3G58060 [Cation efflux family protein] 1.106 -0.024
9 257689_at AT3G12820 AtMYB10, myb domain protein 10, MYB10, myb domain protein 10 1.048 -0.016
10 252364_at AT3G48450 [RPM1-interacting protein 4 (RIN4) family protein] 1.037 -0.017
11 255075_at AT4G09110 [RING/U-box superfamily protein] 1.002 -0.021
12 263176_at AT1G05530 UGT2, UDP-GLUCOSYL TRANSFERASE 2, UGT75B2, UDP-glucosyl transferase 75B2 0.970 -0.035
13 249535_at AT5G38820 [Transmembrane amino acid transporter family protein] 0.949 -0.005
14 261684_at AT1G47400 unknown 0.945 -0.377
15 264710_at AT1G09790 COBL6, COBRA-like protein 6 precursor 0.915 -0.050
16 246860_at AT5G25840 unknown 0.890 -0.025
17 260557_at AT2G43610 [Chitinase family protein] 0.883 -0.017
18 251545_at AT3G58810 ATMTP3, ARABIDOPSIS METAL TOLERANCE PROTEIN 3, ATMTPA2, MTP3, METAL TOLERANCE PROTEIN 3, MTPA2, metal tolerance protein A2 0.879 0.003
19 254976_at AT4G10510 [Subtilase family protein] 0.832 0.059
20 255782_at AT1G19850 ARF5, AUXIN RESPONSE FACTOR 5, IAA24, indole-3-acetic acid inducible 24, MP, MONOPTEROS 0.761 0.037
21 258551_at AT3G06890 unknown 0.742 -0.111
22 251012_at AT5G02580 unknown 0.719 0.010
23 263098_at AT2G16005 [MD-2-related lipid recognition domain-containing protein] 0.686 0.064
24 252427_at AT3G47640 PYE, POPEYE 0.645 -0.114
25 250952_at AT5G03570 ATIREG2, ARABIDOPSIS THALIANA IRON-REGULATED PROTEIN 2, FPN2, FERROPORTIN 2, IREG2, iron regulated 2 0.627 -0.043
26 248978_at AT5G45070 AtPP2-A8, phloem protein 2-A8, PP2-A8, phloem protein 2-A8 0.578 -0.038
27 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] 0.547 -0.032
28 246998_at AT5G67370 CGLD27, CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27 0.493 0.004
29 248466_at AT5G50720 ATHVA22E, ARABIDOPSIS THALIANA HVA22 HOMOLOGUE E, HVA22E, HVA22 homologue E 0.490 -0.037
30 255160_at AT4G07820 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.483 -0.046
31 260308_at AT1G70610 ABCB26, ATP-binding cassette B26, ATTAP1, transporter associated with antigen processing protein 1, TAP1, transporter associated with antigen processing protein 1 0.481 -0.011
32 259228_at AT3G07720 [Galactose oxidase/kelch repeat superfamily protein] 0.471 -0.072
33 248270_at AT5G53450 ORG1, OBP3-responsive gene 1 0.461 -0.063
34 267614_at AT2G26710 BAS1, PHYB ACTIVATION TAGGED SUPPRESSOR 1, CYP72B1, CYP734A1 0.452 0.063
35 250616_at AT5G07280 EMS1, EXCESS MICROSPOROCYTES1, EXS, EXTRA SPOROGENOUS CELLS 0.447 -0.059
36 260754_at AT1G49000 unknown 0.442 -0.115
37 250246_at AT5G13700 APAO, ATPAO1, polyamine oxidase 1, PAO1, polyamine oxidase 1 0.435 0.025
38 257858_at AT3G12920 BRG3, BOI-related gene 3 0.423 -0.018
39 263985_at AT2G42750 DJC77, DNA J protein C77 0.420 -0.041
40 259000_at AT3G01860 unknown 0.412 -0.017
41 263935_at AT2G35930 AtPUB23, PUB23, plant U-box 23 0.409 -0.009
42 246913_at AT5G25830 GATA12, GATA transcription factor 12 0.407 0.011
43 261327_at AT1G44830 [Integrase-type DNA-binding superfamily protein] 0.401 -0.025
44 256763_at AT3G16860 COBL8, COBRA-like protein 8 precursor 0.391 -0.149
45 252300_at AT3G49160 [pyruvate kinase family protein] -0.826 0.110
46 251109_at AT5G01600 ATFER1, ARABIDOPSIS THALIANA FERRETIN 1, FER1, ferretin 1 -0.512 0.102
47 251735_at AT3G56090 ATFER3, ferritin 3, FER3, ferritin 3 -0.432 0.125
48 258367_at AT3G14370 WAG2 -0.415 -0.000
49 261448_at AT1G21140 [Vacuolar iron transporter (VIT) family protein] -0.364 0.021
50 254764_at AT4G13250 NYC1, NON-YELLOW COLORING 1 -0.343 0.039
51 245357_at AT4G17560 [Ribosomal protein L19 family protein] -0.320 0.058
52 250846_at AT5G04590 SIR, sulfite reductase -0.301 0.010
53 250243_at AT5G13630 ABAR, ABA-BINDING PROTEIN, CCH, CONDITIONAL CHLORINA, CCH1, CHLH, H SUBUNIT OF MG-CHELATASE, GUN5, GENOMES UNCOUPLED 5 -0.294 0.007
54 257823_at AT3G25190 [Vacuolar iron transporter (VIT) family protein] -0.281 -0.032
55 260793_at AT1G06190 RHON1, Rho-N 1 -0.261 0.070
56 253252_at AT4G34740 ASE2, GLN phosphoribosyl pyrophosphate amidotransferase 2, ATASE2, GLN phosphoribosyl pyrophosphate amidotransferase 2, ATPURF2, CIA1, CHLOROPLAST IMPORT APPARATUS 1, DOV1, DIFFERENTIAL DEVELOPMENT OF VASCULAR ASSOCIATED CELLS -0.260 0.113
57 255142_at AT4G08390 SAPX, stromal ascorbate peroxidase -0.255 0.046
58 255447_at AT4G02790 EMB3129, EMBRYO DEFECTIVE 3129 -0.253 0.102
59 266587_at AT2G14880 [SWIB/MDM2 domain superfamily protein] -0.251 0.075
60 247320_at AT5G64040 PSAN -0.229 0.007
61 267562_at AT2G39670 [Radical SAM superfamily protein] -0.221 0.142
62 263760_at AT2G21280 ATSULA, GC1, GIANT CHLOROPLAST 1, SULA -0.213 0.003
63 258495_at AT3G02690 [nodulin MtN21 /EamA-like transporter family protein] -0.212 0.003
64 249069_at AT5G44010 unknown -0.206 0.021
65 249466_at AT5G39740 OLI7, OLIGOCELLULA 7, RPL5B, ribosomal protein L5 B -0.180 0.085
66 252277_at AT3G49470 NACA2, nascent polypeptide-associated complex subunit alpha-like protein 2 -0.180 0.045
67 262029_at AT1G35680 RPL21C, chloroplast ribosomal protein L21 -0.177 0.026
68 245798_at AT1G45545 unknown -0.165 0.024
69 246345_at AT3G56760 [Protein kinase superfamily protein] -0.163 0.002
70 248295_at AT5G53070 [Ribosomal protein L9/RNase H1] -0.163 0.223
71 253175_at AT4G35050 MSI3, MULTICOPY SUPPRESSOR OF IRA1 3, NFC3, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 3 -0.160 0.000
72 261578_at AT1G01100 [60S acidic ribosomal protein family] -0.157 0.036
73 257959_at AT3G25560 AtNIK2, NIK2, NSP-interacting kinase 2 -0.157 -0.041
74 262577_at AT1G15290 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.155 0.026
75 258254_at AT3G26782 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.153 0.072
76 248242_at AT5G53580 AtPLR1, PLR1, pyridoxal reductase 1 -0.153 0.019
77 245705_at AT5G04390 [C2H2-type zinc finger family protein] -0.151 -0.049
78 264913_at AT1G60770 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.146 0.087
79 264013_at AT2G21070 FIO1, FIONA1 -0.145 0.052
80 246329_at AT3G43610 [Spc97 / Spc98 family of spindle pole body (SBP) component] -0.140 0.042
81 245372_at AT4G15000 [Ribosomal L27e protein family] -0.140 0.058
82 257645_at AT3G25790 [myb-like transcription factor family protein] -0.139 0.027
83 263653_at AT1G04310 ERS2, ethylene response sensor 2 -0.138 -0.095
84 246303_at AT3G51870 [Mitochondrial substrate carrier family protein] -0.137 0.186
85 265247_at AT2G43030 [Ribosomal protein L3 family protein] -0.137 0.013
86 249325_at AT5G40850 UPM1, urophorphyrin methylase 1 -0.135 0.081
87 251712_at AT3G56120 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.133 0.061