4.0:Information of module
dor control
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0002679 respiratory burst involved in defense re... BP 2.154e-04
GO:0045730 respiratory burst BP 2.154e-04
GO:0009438 methylglyoxal metabolic process BP 1.382e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010101 post-embryonic root morphogenesis BP 1.023e-02
GO:0010102 lateral root morphogenesis BP 1.023e-02
GO:0048527 lateral root development BP 5.141e-02
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
dor control		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 259442_at AT1G02310 MAN1, endo-beta-mannanase 1 0.261 0.099
2 260287_at AT1G80440 KFB20, Kelch repeat F-box 20, KMD1, KISS ME DEADLY 1 0.247 0.040
3 260201_at AT1G67600 [Acid phosphatase/vanadium-dependent haloperoxidase-related protein] 0.242 -0.143
4 260556_at AT2G43620 [Chitinase family protein] 0.206 0.098
5 255831_at AT2G33350 [CCT motif family protein] 0.196 0.069
6 247327_at AT5G64120 AtPRX71, PRX71, peroxidase 71 0.195 -0.165
7 251731_at AT3G56350 [Iron/manganese superoxide dismutase family protein] 0.194 -0.162
8 249197_at AT5G42380 CML37, calmodulin like 37 0.185 0.003
9 250771_at AT5G05400 [LRR and NB-ARC domains-containing disease resistance protein] 0.184 -0.208
10 265748_at AT2G10620 [gypsy-like retrotransposon family (Athila), has a 5.5e-59 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 0.182 -0.014
11 247515_at AT5G61740 ABCA10, ATP-binding cassette A10, ATATH14, ARABIDOPSIS THALIANA ABC2 HOMOLOG 14, ATH14, ABC2 homolog 14 0.175 0.133
12 262482_at AT1G17020 ATSRG1, SENESCENCE-RELATED GENE 1, SRG1, senescence-related gene 1 0.174 0.021
13 267008_at AT2G39350 ABCG1, ATP-binding cassette G1 0.168 -0.067
14 255911_at AT1G66930 [Protein kinase superfamily protein] 0.168 0.003
15 257635_at AT3G26280 CYP71B4, cytochrome P450, family 71, subfamily B, polypeptide 4 0.167 -0.045
16 251016_at AT5G02730 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.163 0.311
17 252916_at AT4G38950 [ATP binding microtubule motor family protein] 0.163 0.156
18 264880_at AT1G61210 DWA3, DWD hypersensitive to ABA 3 0.162 0.072
19 246711_at AT5G28190 unknown 0.161 0.124
20 262870_at AT1G64710 [GroES-like zinc-binding dehydrogenase family protein] 0.154 -0.607
21 261734_at AT1G47790 [F-box and associated interaction domains-containing protein] 0.153 0.185
22 260242_at AT1G63650 AtEGL3, ATMYC-2, EGL1, EGL3, ENHANCER OF GLABRA 3 0.153 -0.028
23 258064_at AT3G14680 CYP72A14, cytochrome P450, family 72, subfamily A, polypeptide 14 0.151 -0.051
24 256716_at AT2G34100 unknown 0.147 -0.069
25 258936_s_at AT3G10100 ASY2 0.145 -0.028
26 251606_at AT3G57840 [Plant self-incompatibility protein S1 family] 0.143 -0.043
27 265589_at AT2G20170 unknown 0.143 0.080
28 262527_at AT1G17010 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.141 -0.011
29 259283_at AT3G11440 ATMYB65, MYB DOMAIN PROTEIN 65, MYB65, myb domain protein 65 0.141 -0.018
30 245343_at AT4G15830 [ARM repeat superfamily protein] -0.294 -0.105
31 262109_at AT1G02730 ATCSLD5, cellulose synthase-like D5, CSLD5, CELLULOSE SYNTHASE LIKE D5, CSLD5, cellulose synthase-like D5, SOS6, SALT OVERLY SENSITIVE 6 -0.281 -0.659
32 264947_at AT1G77020 [DNAJ heat shock N-terminal domain-containing protein] -0.272 -0.216
33 266358_at AT2G32280 VCC, VASCULATURE COMPLEXITY AND CONNECTIVITY -0.262 -0.064
34 266951_at AT2G18940 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.228 -0.101
35 266848_at AT2G25950 unknown -0.215 0.133
36 251290_at AT3G61850 DAG1, dof affecting germination 1 -0.207 -0.058
37 247250_at AT5G64630 FAS2, FASCIATA 2, MUB3.9, NFB01, NFB1 -0.200 -0.034
38 254236_at AT4G23840 [Leucine-rich repeat (LRR) family protein] -0.193 -0.230
39 250084_at AT5G17240 SDG40, SET domain group 40 -0.192 -0.218
40 252885_at AT4G39260 ATGRP8, GLYCINE-RICH PROTEIN 8, CCR1, cold, circadian rhythm, and RNA binding 1, GR-RBP8, glycine-rich RNA-binding protein 8, GRP8 -0.191 0.204
41 262434_at AT1G47670 [Transmembrane amino acid transporter family protein] -0.191 0.064
42 256031_at AT1G34100 [choline kinase, putative, similar to choline kinase (GmCK2p) GI:1438881 from (Glycine max)] -0.189 0.057
43 251617_at AT3G58000 [VQ motif-containing protein] -0.181 -0.083
44 255597_at AT4G01730 [DHHC-type zinc finger family protein] -0.178 0.141
45 250588_at AT5G07660 SMC6A, structural maintenance of chromosomes 6A -0.178 -0.182
46 247126_at AT5G66080 APD9, Arabidopsis Pp2c clade D 9 -0.177 0.083
47 266164_at AT2G28050 [Pentatricopeptide repeat (PPR) superfamily protein] -0.176 0.106
48 256768_at AT3G13682 LDL2, LSD1-like2 -0.176 -0.214
49 264286_at AT1G61870 PPR336, pentatricopeptide repeat 336 -0.165 -0.067
50 261406_at AT1G18800 NRP2, NAP1-related protein 2 -0.163 0.104
51 246498_at AT5G16230 [Plant stearoyl-acyl-carrier-protein desaturase family protein] -0.162 0.022
52 254349_at AT4G22250 [RING/U-box superfamily protein] -0.162 -0.054
53 251706_at AT3G56620 UMAMIT10, Usually multiple acids move in and out Transporters 10 -0.162 0.007
54 252097_at AT3G51090 unknown -0.160 -0.100
55 262438_at AT1G47410 unknown -0.159 0.194
56 253592_at AT4G30840 [Transducin/WD40 repeat-like superfamily protein] -0.158 -0.088
57 258074_at AT3G25890 CRF11, cytokinin response factor 11 -0.158 -0.058