4.0:Information of module
plant (tga2-5-6) 4h control
In comparison with Elevated CO2 AMPLE N DAY help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009627 systemic acquired resistance BP 8.651e-19
GO:0009814 defense response, incompatible interacti... BP 2.404e-18
GO:0006955 immune response BP 7.020e-18
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0019748 secondary metabolic process BP 2.130e-07
GO:0009407 toxin catabolic process BP 2.853e-06
GO:0090487 secondary metabolite catabolic process BP 2.853e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
plant (tga2-5-6) 4h control		 Log2 signal ratio
Elevated CO2 AMPLE N DAY
1 265837_at AT2G14560 LURP1, LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA 0.854 0.177
2 250942_at AT5G03350 [Legume lectin family protein] 0.817 0.163
3 257382_at AT2G40750 ATWRKY54, WRKY DNA-BINDING PROTEIN 54, WRKY54, WRKY DNA-binding protein 54 0.733 0.202
4 261221_at AT1G19960 unknown 0.626 0.080
5 245265_at AT4G14400 ACD6, ACCELERATED CELL DEATH 6 0.556 0.039
6 249205_at AT5G42600 MRN1, marneral synthase 1 0.549 0.005
7 250302_at AT5G11920 AtcwINV6, 6-&1-fructan exohydrolase, cwINV6, 6-&1-fructan exohydrolase 0.505 0.235
8 265698_at AT2G32160 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.492 -0.018
9 248169_at AT5G54610 ANK, ankyrin, BDA1, bian da 2 (becoming big in Chinese) 0.483 0.099
10 258322_at AT3G22740 HMT3, homocysteine S-methyltransferase 3 0.474 0.133
11 250445_at AT5G10760 [Eukaryotic aspartyl protease family protein] 0.467 0.249
12 256596_at AT3G28540 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.437 0.107
13 261339_at AT1G35710 [Protein kinase family protein with leucine-rich repeat domain] 0.431 0.129
14 251705_at AT3G56400 ATWRKY70, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 70, WRKY70, WRKY DNA-binding protein 70 0.430 0.105
15 254416_at AT4G21380 ARK3, receptor kinase 3, RK3, receptor kinase 3 0.400 0.088
16 249295_at AT5G41280 [Receptor-like protein kinase-related family protein] 0.384 -0.005
17 249890_at AT5G22570 ATWRKY38, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 38, WRKY38, WRKY DNA-binding protein 38 0.375 0.495
18 264843_at AT1G03400 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.372 0.037
19 248932_at AT5G46050 AtNPF5.2, ATPTR3, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 3, NPF5.2, NRT1/ PTR family 5.2, PTR3, peptide transporter 3 0.372 0.273
20 249754_at AT5G24530 DMR6, DOWNY MILDEW RESISTANT 6 0.371 0.209
21 256497_at AT1G31580 CXC750, ECS1 0.369 -0.001
22 267461_at AT2G33830 AtDRM2, DRM2, dormancy associated gene 2 0.358 0.060
23 259251_at AT3G07600 [Heavy metal transport/detoxification superfamily protein ] 0.357 0.047
24 247476_at AT5G62330 unknown 0.337 0.043
25 245550_at AT4G15330 CYP705A1, cytochrome P450, family 705, subfamily A, polypeptide 1 0.332 -0.005
26 251673_at AT3G57240 AtBG3, BG3, beta-1,3-glucanase 3 0.331 0.412
27 259561_at AT1G21250 AtWAK1, PRO25, WAK1, cell wall-associated kinase 1 0.331 0.099
28 250344_at AT5G11930 [Thioredoxin superfamily protein] 0.314 0.230
29 260211_at AT1G74440 unknown 0.313 0.139
30 262743_at AT1G29020 [Calcium-binding EF-hand family protein] 0.312 -0.029
31 252403_at AT3G48080 [alpha/beta-Hydrolases superfamily protein] 0.311 0.303
32 259550_at AT1G35230 AGP5, arabinogalactan protein 5 0.308 0.349
33 248062_at AT5G55450 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.298 0.292
34 249485_at AT5G39020 [Malectin/receptor-like protein kinase family protein] 0.291 0.111
35 253997_at AT4G26090 RPS2, RESISTANT TO P. SYRINGAE 2 0.290 0.096
36 259897_at AT1G71380 ATCEL3, cellulase 3, ATGH9B3, ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B3, CEL3, cellulase 3 0.284 -0.038
37 263402_at AT2G04050 [MATE efflux family protein] 0.283 -0.011
38 256366_at AT1G66880 [Protein kinase superfamily protein] 0.282 0.148
39 267094_at AT2G38080 ATLMCO4, ARABIDOPSIS LACCASE-LIKE MULTICOPPER OXIDASE 4, IRX12, IRREGULAR XYLEM 12, LAC4, LACCASE 4, LMCO4, LACCASE-LIKE MULTICOPPER OXIDASE 4 0.281 -0.072
40 265611_at AT2G25510 unknown 0.275 0.007
41 262705_at AT1G16260 [Wall-associated kinase family protein] 0.273 0.032
42 249188_at AT5G42830 [HXXXD-type acyl-transferase family protein] 0.271 0.164
43 255702_at AT4G00230 XSP1, xylem serine peptidase 1 0.266 -0.091
44 256602_at AT3G28310 unknown 0.261 0.064
45 249773_at AT5G24140 SQP2, squalene monooxygenase 2 0.257 -0.040
46 244999_at ATCG00190 RPOB, RNA polymerase subunit beta 0.252 0.004
47 267496_at AT2G30550 DALL3, DAD1-Like Lipase 3 0.248 0.068
48 265067_at AT1G03850 ATGRXS13, glutaredoxin 13, GRXS13, glutaredoxin 13 0.245 0.389
49 253191_at AT4G35350 XCP1, xylem cysteine peptidase 1 0.244 -0.079
50 245611_at AT4G14390 [Ankyrin repeat family protein] 0.243 0.209
51 256252_at AT3G11340 UGT76B1, UDP-dependent glycosyltransferase 76B1 0.236 0.340
52 256368_at AT1G66800 [NAD(P)-binding Rossmann-fold superfamily protein] 0.235 0.028
53 250828_at AT5G05250 unknown 0.233 0.050
54 261459_at AT1G21100 IGMT1, indole glucosinolate O-methyltransferase 1 0.229 0.108
55 255630_at AT4G00700 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] 0.227 0.427
56 258813_at AT3G04060 anac046, NAC domain containing protein 46, NAC046, NAC domain containing protein 46 0.227 0.029
57 249055_at AT5G44460 CML43, calmodulin like 43 0.226 0.062
58 256306_at AT1G30370 DLAH, DAD1-like acylhydrolase 0.226 0.084
59 260179_at AT1G70690 HWI1, HOPW1-1-INDUCED GENE1, PDLP5, PLASMODESMATA-LOCATED PROTEIN 5 0.223 0.112
60 267436_at AT2G19190 FRK1, FLG22-induced receptor-like kinase 1 0.223 0.173
61 256100_at AT1G13750 [Purple acid phosphatases superfamily protein] 0.220 0.097
62 253827_at AT4G28085 unknown 0.220 0.065
63 262796_at AT1G20850 XCP2, xylem cysteine peptidase 2 0.219 -0.087
64 252170_at AT3G50480 HR4, homolog of RPW8 4 0.217 0.222
65 254256_at AT4G23180 CRK10, cysteine-rich RLK (RECEPTOR-like protein kinase) 10, RLK4 0.210 0.068
66 249729_at AT5G24410 PGL4, 6-phosphogluconolactonase 4 0.207 -0.012
67 251704_at AT3G56360 unknown 0.206 0.027
68 246121_at AT5G20370 [serine-rich protein-related] 0.205 -0.039
69 262507_at AT1G11330 [S-locus lectin protein kinase family protein] 0.204 0.117
70 249439_at AT5G40020 [Pathogenesis-related thaumatin superfamily protein] 0.202 -0.064
71 261598_at AT1G49750 [Leucine-rich repeat (LRR) family protein] 0.199 0.009
72 245000_at ATCG00210 YCF6 0.198 0.043
73 264148_at AT1G02220 ANAC003, NAC domain containing protein 3, NAC003, NAC domain containing protein 3 0.198 0.090
74 263478_at AT2G31880 EVR, EVERSHED, SOBIR1, SUPPRESSOR OF BIR1 1 0.198 0.144
75 255852_at AT1G66970 GDPDL1, Glycerophosphodiester phosphodiesterase (GDPD) like 1, SVL2, SHV3-like 2 0.197 0.032
76 252447_at AT3G47040 [Glycosyl hydrolase family protein] 0.197 0.034
77 260558_at AT2G43600 [Chitinase family protein] 0.196 -0.032
78 260419_at AT1G69730 [Wall-associated kinase family protein] 0.192 0.009
79 245074_at AT2G23200 [Protein kinase superfamily protein] 0.191 0.036
80 256935_at AT3G22570 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.191 -0.070
81 251545_at AT3G58810 ATMTP3, ARABIDOPSIS METAL TOLERANCE PROTEIN 3, ATMTPA2, MTP3, METAL TOLERANCE PROTEIN 3, MTPA2, metal tolerance protein A2 0.188 -0.099
82 248092_at AT5G55170 ATSUMO3, SUM3, SMALL UBIQUITIN-LIKE MODIFIER 3, SUMO 3, SMALL UBIQUITIN-LIKE MODIFIER 3, SUMO3, small ubiquitin-like modifier 3 0.185 0.165
83 252346_at AT3G48650 [pseudogene] 0.181 0.281
84 250655_at AT5G06960 OBF5, OCS-element binding factor 5, TGA5, TGACG MOTIF-BINDING FACTOR 5 -0.912 0.029
85 262518_at AT1G17170 ATGSTU24, glutathione S-transferase TAU 24, GST, Arabidopsis thaliana Glutathione S-transferase (class tau) 24, GSTU24, glutathione S-transferase TAU 24 -0.707 0.137
86 250671_at AT5G06950 AHBP-1B, TGA2, TGACG sequence-specific binding protein 2 -0.653 -0.000
87 246464_at AT5G16980 [Zinc-binding dehydrogenase family protein] -0.637 -0.009
88 262517_at AT1G17180 ATGSTU25, glutathione S-transferase TAU 25, GSTU25, glutathione S-transferase TAU 25 -0.597 -0.009
89 257823_at AT3G25190 [Vacuolar iron transporter (VIT) family protein] -0.591 0.003
90 263046_at AT2G05380 GRP3S, glycine-rich protein 3 short isoform -0.559 0.075
91 263184_at AT1G05560 UGT1, UDP-GLUCOSE TRANSFERASE 1, UGT75B1, UDP-glucosyltransferase 75B1 -0.551 -0.055
92 258033_at AT3G21250 ABCC8, ATP-binding cassette C8, ATMRP6, ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, MRP6, multidrug resistance-associated protein 6 -0.548 -0.032
93 260189_at AT1G67550 URE, urease -0.533 0.068
94 266290_at AT2G29490 ATGSTU1, glutathione S-transferase TAU 1, GST19, GLUTATHIONE S-TRANSFERASE 19, GSTU1, glutathione S-transferase TAU 1 -0.533 -0.058
95 249599_at AT5G37990 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.501 0.022
96 263098_at AT2G16005 [MD-2-related lipid recognition domain-containing protein] -0.487 0.052
97 259705_at AT1G77450 anac032, NAC domain containing protein 32, NAC032, NAC domain containing protein 32 -0.486 0.002
98 262935_at AT1G79410 AtOCT5, organic cation/carnitine transporter5, OCT5, organic cation/carnitine transporter5 -0.485 -0.053
99 257216_at AT3G14990 AtDJ1A, DJ-1 homolog A, DJ-1a, DJ1A, DJ-1 homolog A -0.480 0.060
100 266296_at AT2G29420 ATGSTU7, glutathione S-transferase tau 7, GST25, GLUTATHIONE S-TRANSFERASE 25, GSTU7, glutathione S-transferase tau 7 -0.480 0.022
101 256269_at AT3G12250 BZIP45, TGA6, TGACG motif-binding factor 6 -0.471 -0.036
102 259548_at AT1G35260 MLP165, MLP-like protein 165 -0.450 0.114
103 267382_at AT2G44300 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.446 -0.006
104 261564_at AT1G01720 ANAC002, Arabidopsis NAC domain containing protein 2, ATAF1 -0.419 -0.003
105 250499_at AT5G09730 ATBX3, ATBXL3, BETA-XYLOSIDASE 3, BX3, BXL3, beta-xylosidase 3, XYL3 -0.417 -0.197
106 253344_at AT4G33550 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.417 -0.117
107 264016_at AT2G21220 SAUR12, SMALL AUXIN UPREGULATED RNA 12 -0.408 0.057
108 254759_at AT4G13180 [NAD(P)-binding Rossmann-fold superfamily protein] -0.385 0.089
109 266141_at AT2G02120 LCR70, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 70, PDF2.1 -0.375 -0.040
110 255543_at AT4G01870 [tolB protein-related] -0.373 -0.012
111 253281_at AT4G34138 UGT73B1, UDP-glucosyl transferase 73B1 -0.356 -0.022
112 260592_at AT1G55850 ATCSLE1, CSLE1, cellulose synthase like E1 -0.350 0.057
113 255666_at AT4G00390 [DNA-binding storekeeper protein-related transcriptional regulator] -0.342 -0.020
114 264872_at AT1G24260 AGL9, AGAMOUS-like 9, SEP3, SEPALLATA3 -0.339 -0.032
115 251968_at AT3G53100 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.337 -0.099
116 260813_at AT1G43700 SUE3, sulphate utilization efficiency 3, VIP1, VIRE2-interacting protein 1 -0.337 -0.011
117 259040_at AT3G09270 ATGSTU8, glutathione S-transferase TAU 8, GSTU8, glutathione S-transferase TAU 8 -0.328 0.234
118 263959_at AT2G36210 SAUR45, SMALL AUXIN UPREGULATED RNA 45 -0.315 -0.020
119 260135_at AT1G66400 CML23, calmodulin like 23 -0.306 0.125
120 254512_at AT4G20230 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.305 -0.162
121 262680_at AT1G75880 [SGNH hydrolase-type esterase superfamily protein] -0.304 0.008
122 266078_at AT2G40670 ARR16, response regulator 16, RR16, response regulator 16 -0.304 -0.047
123 263668_at AT1G04350 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.303 -0.020
124 247024_at AT5G66985 unknown -0.298 0.014
125 247447_at AT5G62730 [Major facilitator superfamily protein] -0.294 0.048
126 258646_at AT3G08040 ATFRD3, FRD3, FERRIC REDUCTASE DEFECTIVE 3, MAN1, MANGANESE ACCUMULATOR 1 -0.284 0.012
127 258746_at AT3G05950 [RmlC-like cupins superfamily protein] -0.278 -0.019
128 260475_at AT1G11080 scpl31, serine carboxypeptidase-like 31 -0.277 0.030
129 245947_at AT5G19530 ACL5, ACAULIS 5 -0.276 -0.055
130 264625_at AT1G09020 ATSNF4, SNF4, homolog of yeast sucrose nonfermenting 4 -0.270 -0.052
131 258923_at AT3G10450 SCPL7, serine carboxypeptidase-like 7 -0.266 0.044
132 257642_at AT3G25710 ATAIG1, BHLH32, basic helix-loop-helix 32, TMO5, TARGET OF MONOPTEROS 5 -0.266 -0.245
133 252102_at AT3G50970 LTI30, LOW TEMPERATURE-INDUCED 30, XERO2 -0.262 0.056
134 263947_at AT2G35820 [ureidoglycolate hydrolases] -0.261 -0.002
135 247541_at AT5G61660 [glycine-rich protein] -0.261 -0.013
136 266294_at AT2G29500 [HSP20-like chaperones superfamily protein] -0.252 0.021
137 248011_at AT5G56300 GAMT2, gibberellic acid methyltransferase 2 -0.246 0.016
138 258956_at AT3G01440 PnsL3, Photosynthetic NDH subcomplex L 3, PQL1, PsbQ-like 1, PQL2, PsbQ-like 2 -0.244 -0.082
139 251130_at AT5G01180 AtNPF8.2, ATPTR5, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 5, NPF8.2, NRT1/ PTR family 8.2, PTR5, peptide transporter 5 -0.244 -0.209
140 253597_at AT4G30690 [Translation initiation factor 3 protein] -0.241 -0.016
141 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.239 0.071
142 254504_at AT4G20030 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.238 -0.016
143 264497_at AT1G30840 ATPUP4, purine permease 4, PUP4, purine permease 4 -0.235 -0.071
144 246463_at AT5G16970 AER, alkenal reductase, AT-AER, alkenal reductase -0.233 -0.010
145 257643_at AT3G25730 EDF3, ethylene response DNA binding factor 3 -0.233 -0.045
146 257375_at AT2G38640 unknown -0.229 -0.024
147 248975_at AT5G45040 CYTC6A, cytochrome c6A -0.223 -0.091
148 255575_at AT4G01430 UMAMIT29, Usually multiple acids move in and out Transporters 29 -0.220 0.119
149 256299_at AT1G69530 AT-EXP1, ATEXP1, ATEXPA1, expansin A1, ATHEXP ALPHA 1.2, EXP1, EXPANSIN 1, EXPA1, expansin A1 -0.214 -0.023
150 265151_at AT1G51340 [MATE efflux family protein] -0.213 -0.105
151 261717_at AT1G18400 BEE1, BR enhanced expression 1 -0.211 -0.157
152 265586_at AT2G19990 PR-1-LIKE, pathogenesis-related protein-1-like -0.210 0.046
153 258038_at AT3G21260 GLTP3, GLYCOLIPID TRANSFER PROTEIN 3 -0.206 -0.037
154 266015_at AT2G24190 SDR2, short-chain dehydrogenase/reductase 2 -0.205 -0.061
155 256878_at AT3G26460 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.204 -0.006
156 248460_at AT5G50915 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.204 0.033
157 245277_at AT4G15550 IAGLU, indole-3-acetate beta-D-glucosyltransferase -0.193 -0.066
158 250764_at AT5G05960 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.193 -0.009
159 261425_at AT1G18880 AtNPF2.9, NPF2.9, NRT1/ PTR family 2.9, NRT1.9, nitrate transporter 1.9 -0.189 -0.027
160 245702_at AT5G04220 ATSYTC, NTMC2T1.3, NTMC2TYPE1.3, SYT3, synaptotagmin 3, SYTC -0.186 -0.010
161 259832_at AT1G69580 [Homeodomain-like superfamily protein] -0.186 -0.079
162 263473_at AT2G31750 UGT74D1, UDP-glucosyl transferase 74D1 -0.185 -0.029
163 252482_at AT3G46670 UGT76E11, UDP-glucosyl transferase 76E11 -0.181 -0.098
164 248381_at AT5G51830 [pfkB-like carbohydrate kinase family protein] -0.180 0.079
165 262700_at AT1G76020 [Thioredoxin superfamily protein] -0.178 -0.047
166 249467_at AT5G39610 ANAC092, Arabidopsis NAC domain containing protein 92, ATNAC2, NAC domain containing protein 2, ATNAC6, NAC domain containing protein 6, NAC2, NAC domain containing protein 2, NAC6, NAC domain containing protein 6, ORE1, ORESARA 1 -0.178 0.159