4.0:Information of module
root - 08% oxygen - 48h
In comparison with mbd4 mutant thaliana 10-day-old seedling help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0001666 response to hypoxia BP 2.148e-07
GO:0036293 response to decreased oxygen levels BP 2.672e-07
GO:0070482 response to oxygen levels BP 2.672e-07
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:1902580 single-organism cellular localization BP 4.712e-04
GO:0006605 protein targeting BP 4.868e-04
GO:1902582 single-organism intracellular transport BP 4.978e-04
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
root - 08% oxygen - 48h		 Log2 signal ratio
mbd4 mutant thaliana 10-day-old seedling
1 255807_at AT4G10270 [Wound-responsive family protein] 0.680 0.533
2 252746_at AT3G43190 ATSUS4, ARABIDOPSIS THALIANA SUCROSE SYNTHASE 4, SUS4, sucrose synthase 4 0.501 0.441
3 263096_at AT2G16060 AHB1, hemoglobin 1, ARATH GLB1, ATGLB1, GLB1, CLASS I HEMOGLOBIN, HB1, hemoglobin 1, NSHB1 0.414 0.352
4 265948_at AT2G19590 ACO1, ACC oxidase 1, ATACO1 0.406 0.258
5 264953_at AT1G77120 ADH, ALCOHOL DEHYDROGENASE, ADH1, alcohol dehydrogenase 1, ATADH, ARABIDOPSIS THALIANA ALCOHOL DEHYDROGENASE, ATADH1 0.306 0.294
6 250152_at AT5G15120 unknown 0.304 0.804
7 245026_at ATCG00140 ATPH 0.286 -0.132
8 249866_at AT5G23010 IMS3, 2-ISOPROPYLMALATE SYNTHASE 3, MAM1, methylthioalkylmalate synthase 1 0.258 0.008
9 257922_at AT3G23150 ETR2, ethylene response 2 0.224 0.172
10 257021_at AT3G19710 BCAT4, branched-chain aminotransferase4 0.192 0.009
11 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 0.177 0.303
12 245998_at AT5G20830 ASUS1, atsus1, SUS1, sucrose synthase 1 0.173 0.121
13 254550_at AT4G19690 ATIRT1, ARABIDOPSIS IRON-REGULATED TRANSPORTER 1, IRT1, iron-regulated transporter 1 0.170 -0.193
14 266395_at AT2G43100 ATLEUD1, IPMI2, isopropylmalate isomerase 2 0.154 -0.006
15 258879_at AT3G03270 [Adenine nucleotide alpha hydrolases-like superfamily protein] 0.139 0.253
16 258068_at AT3G25990 [Homeodomain-like superfamily protein] -0.211 0.024
17 261395_at AT1G79700 WRI4, WRINKLED 4 -0.149 0.079
18 245186_at AT1G67710 ARR11, response regulator 11 -0.129 -0.030
19 254927_at AT4G11400 [ARID/BRIGHT DNA-binding domain] -0.124 -0.077
20 250837_at AT5G04620 ATBIOF, biotin F, BIO4, biotin 4, BIOF, biotin F -0.123 -0.031
21 246228_at AT4G36430 [Peroxidase superfamily protein] -0.106 0.112
22 259410_at AT1G13340 [Regulator of Vps4 activity in the MVB pathway protein] -0.105 0.198
23 261502_at AT1G14440 AtHB31, homeobox protein 31, FTM2, FLORAL TRANSITION AT THE MERISTEM2, HB31, homeobox protein 31, ZHD4, ZINC FINGER HOMEODOMAIN 4 -0.101 -0.098
24 260560_at AT2G43590 [Chitinase family protein] -0.098 0.107
25 246272_at AT4G37150 ATMES9, ARABIDOPSIS THALIANA METHYL ESTERASE 9, MES9, methyl esterase 9 -0.098 -0.086
26 249108_at AT5G43690 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.098 -0.070
27 254670_at AT4G18390 TCP2, TCP2, TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 -0.091 -0.132
28 259296_at AT3G05350 [Metallopeptidase M24 family protein] -0.086 -0.074
29 266383_at AT2G14580 ATPRB1, basic pathogenesis-related protein 1, PRB1, basic pathogenesis-related protein 1 -0.084 -0.017