4.0:Information of module
root - 08% oxygen - 48h
In comparison with KCl germinant help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0001666 response to hypoxia BP 2.148e-07
GO:0036293 response to decreased oxygen levels BP 2.672e-07
GO:0070482 response to oxygen levels BP 2.672e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:1902580 single-organism cellular localization BP 4.712e-04
GO:0006605 protein targeting BP 4.868e-04
GO:1902582 single-organism intracellular transport BP 4.978e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
root - 08% oxygen - 48h		 Log2 signal ratio
KCl germinant
1 255807_at AT4G10270 [Wound-responsive family protein] 0.680 -0.146
2 252746_at AT3G43190 ATSUS4, ARABIDOPSIS THALIANA SUCROSE SYNTHASE 4, SUS4, sucrose synthase 4 0.501 -0.232
3 263096_at AT2G16060 AHB1, hemoglobin 1, ARATH GLB1, ATGLB1, GLB1, CLASS I HEMOGLOBIN, HB1, hemoglobin 1, NSHB1 0.414 -0.127
4 265948_at AT2G19590 ACO1, ACC oxidase 1, ATACO1 0.406 -0.155
5 264953_at AT1G77120 ADH, ALCOHOL DEHYDROGENASE, ADH1, alcohol dehydrogenase 1, ATADH, ARABIDOPSIS THALIANA ALCOHOL DEHYDROGENASE, ATADH1 0.306 -0.306
6 250152_at AT5G15120 unknown 0.304 -0.058
7 245026_at ATCG00140 ATPH 0.286 0.291
8 249866_at AT5G23010 IMS3, 2-ISOPROPYLMALATE SYNTHASE 3, MAM1, methylthioalkylmalate synthase 1 0.258 0.039
9 257922_at AT3G23150 ETR2, ethylene response 2 0.224 0.072
10 257021_at AT3G19710 BCAT4, branched-chain aminotransferase4 0.192 0.079
11 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 0.177 -0.188
12 245998_at AT5G20830 ASUS1, atsus1, SUS1, sucrose synthase 1 0.173 -0.056
13 254550_at AT4G19690 ATIRT1, ARABIDOPSIS IRON-REGULATED TRANSPORTER 1, IRT1, iron-regulated transporter 1 0.170 -0.071
14 266395_at AT2G43100 ATLEUD1, IPMI2, isopropylmalate isomerase 2 0.154 0.123
15 258879_at AT3G03270 [Adenine nucleotide alpha hydrolases-like superfamily protein] 0.139 -0.090
16 258068_at AT3G25990 [Homeodomain-like superfamily protein] -0.211 0.045
17 261395_at AT1G79700 WRI4, WRINKLED 4 -0.149 0.255
18 245186_at AT1G67710 ARR11, response regulator 11 -0.129 0.105
19 254927_at AT4G11400 [ARID/BRIGHT DNA-binding domain] -0.124 0.113
20 250837_at AT5G04620 ATBIOF, biotin F, BIO4, biotin 4, BIOF, biotin F -0.123 0.121
21 246228_at AT4G36430 [Peroxidase superfamily protein] -0.106 -0.069
22 259410_at AT1G13340 [Regulator of Vps4 activity in the MVB pathway protein] -0.105 -0.030
23 261502_at AT1G14440 AtHB31, homeobox protein 31, FTM2, FLORAL TRANSITION AT THE MERISTEM2, HB31, homeobox protein 31, ZHD4, ZINC FINGER HOMEODOMAIN 4 -0.101 -0.133
24 260560_at AT2G43590 [Chitinase family protein] -0.098 -0.361
25 246272_at AT4G37150 ATMES9, ARABIDOPSIS THALIANA METHYL ESTERASE 9, MES9, methyl esterase 9 -0.098 0.117
26 249108_at AT5G43690 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.098 0.044
27 254670_at AT4G18390 TCP2, TCP2, TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 -0.091 0.128
28 259296_at AT3G05350 [Metallopeptidase M24 family protein] -0.086 0.017
29 266383_at AT2G14580 ATPRB1, basic pathogenesis-related protein 1, PRB1, basic pathogenesis-related protein 1 -0.084 0.096