4.0:Information of module
root - 04% oxygen - 48h
In comparison with Col0-PsmES4326-24hpi help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0001666 response to hypoxia BP 9.846e-20
GO:0036293 response to decreased oxygen levels BP 1.781e-19
GO:0070482 response to oxygen levels BP 1.781e-19
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0051649 establishment of localization in cell BP 6.534e-04
GO:0006623 protein targeting to vacuole BP 1.179e-03
GO:0072665 protein localization to vacuole BP 1.179e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
root - 04% oxygen - 48h		 Log2 signal ratio
Col0-PsmES4326-24hpi
1 260869_at AT1G43800 FTM1, FLORAL TRANSITION AT THE MERISTEM1, SAD6, STEAROYL-ACYL CARRIER PROTEIN Δ9-DESATURASE6 1.276 0.040
2 255807_at AT4G10270 [Wound-responsive family protein] 1.266 -0.142
3 253298_at AT4G33560 [Wound-responsive family protein] 1.091 0.127
4 245226_at AT3G29970 [B12D protein] 1.007 0.108
5 264846_at AT2G17850 [Rhodanese/Cell cycle control phosphatase superfamily protein] 0.976 0.121
6 252746_at AT3G43190 ATSUS4, ARABIDOPSIS THALIANA SUCROSE SYNTHASE 4, SUS4, sucrose synthase 4 0.905 0.068
7 254200_at AT4G24110 unknown 0.785 0.356
8 249384_at AT5G39890 unknown 0.714 0.099
9 265948_at AT2G19590 ACO1, ACC oxidase 1, ATACO1 0.706 0.077
10 263096_at AT2G16060 AHB1, hemoglobin 1, ARATH GLB1, ATGLB1, GLB1, CLASS I HEMOGLOBIN, HB1, hemoglobin 1, NSHB1 0.648 0.206
11 258930_at AT3G10040 [sequence-specific DNA binding transcription factors] 0.645 0.043
12 257153_at AT3G27220 [Galactose oxidase/kelch repeat superfamily protein] 0.618 -0.008
13 257947_at AT3G21720 ICL, isocitrate lyase 0.610 0.015
14 264953_at AT1G77120 ADH, ALCOHOL DEHYDROGENASE, ADH1, alcohol dehydrogenase 1, ATADH, ARABIDOPSIS THALIANA ALCOHOL DEHYDROGENASE, ATADH1 0.607 0.444
15 245586_at AT4G14980 [Cysteine/Histidine-rich C1 domain family protein] 0.573 0.089
16 250152_at AT5G15120 unknown 0.553 0.077
17 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 0.551 0.176
18 247431_at AT5G62520 SRO5, similar to RCD one 5 0.533 0.539
19 245173_at AT2G47520 AtERF71, Arabidopsis thaliana ethylene response factor 71, ERF71, ethylene response factor 71, HRE2, HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 2 0.447 0.241
20 258487_at AT3G02550 LBD41, LOB domain-containing protein 41 0.417 0.335
21 258879_at AT3G03270 [Adenine nucleotide alpha hydrolases-like superfamily protein] 0.365 0.089
22 261266_at AT1G26770 AT-EXP10, ARABIDOPSIS THALIANA EXPANSIN 10, ATEXP10, ARABIDOPSIS THALIANA EXPANSIN 10, ATEXPA10, expansin A10, ATHEXP ALPHA 1.1, ARABIDOPSIS THALIANA EXPANSIN ALPHA 1.1, EXP10, EXPANSIN 10, EXPA10, expansin A10 0.345 -0.090
23 245998_at AT5G20830 ASUS1, atsus1, SUS1, sucrose synthase 1 0.339 0.413
24 262679_at AT1G75830 LCR67, low-molecular-weight cysteine-rich 67, PDF1.1, PLANT DEFENSIN 1.1 0.323 0.118
25 260451_at AT1G72360 AtERF73, ERF73, ethylene response factor 73, HRE1, HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 1 0.308 0.190
26 264469_at AT1G67100 LBD40, LOB domain-containing protein 40 0.296 0.060
27 261567_at AT1G33055 unknown 0.282 0.045
28 249015_at AT5G44730 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] 0.269 0.155
29 245951_at AT5G19550 AAT2, ASPARTATE AMINOTRANSFERASE 2, ASP2, aspartate aminotransferase 2 0.266 0.264
30 247024_at AT5G66985 unknown 0.249 0.060
31 253874_at AT4G27450 [Aluminium induced protein with YGL and LRDR motifs] 0.234 0.139
32 257891_at AT3G17170 RFC3, REGULATOR OF FATTY-ACID COMPOSITION 3 0.226 -1.048
33 257021_at AT3G19710 BCAT4, branched-chain aminotransferase4 0.224 -0.574
34 250413_at AT5G11160 APT5, adenine phosphoribosyltransferase 5 0.224 -0.136
35 254553_at AT4G19530 [disease resistance protein (TIR-NBS-LRR class) family] 0.209 -0.721
36 262383_at AT1G72940 [Toll-Interleukin-Resistance (TIR) domain-containing protein] 0.195 0.428
37 247594_at AT5G60800 [Heavy metal transport/detoxification superfamily protein ] 0.192 0.480
38 248770_at AT5G47740 [Adenine nucleotide alpha hydrolases-like superfamily protein] -0.317 0.412
39 261574_at AT1G01190 CYP78A8, cytochrome P450, family 78, subfamily A, polypeptide 8 -0.302 -0.016
40 255127_at AT4G08300 UMAMIT17, Usually multiple acids move in and out Transporters 17 -0.296 0.152
41 253182_at AT4G35190 LOG5, LONELY GUY 5 -0.268 0.123
42 255877_at AT2G40460 [Major facilitator superfamily protein] -0.264 0.126
43 261395_at AT1G79700 WRI4, WRINKLED 4 -0.263 -0.196
44 248621_at AT5G49350 [Glycine-rich protein family] -0.248 0.116
45 245186_at AT1G67710 ARR11, response regulator 11 -0.246 -0.239
46 267471_at AT2G30390 ATFC-II, FC-II, FC2, ferrochelatase 2 -0.208 -0.308
47 265983_at AT2G18550 ATHB21, homeobox protein 21, HB-2, homeobox-2, HB21, homeobox protein 21 -0.195 0.006
48 260599_at AT1G55940 CYP708A1, cytochrome P450, family 708, subfamily A, polypeptide 1 -0.191 0.068
49 259618_at AT1G48000 AtMYB112, myb domain protein 112, MYB112, myb domain protein 112 -0.175 0.851
50 245748_at AT1G51140 AKS1, ABA-responsive kinase substrate 1, FBH3, FLOWERING BHLH 3 -0.171 0.069
51 251191_at AT3G62590 [alpha/beta-Hydrolases superfamily protein] -0.164 0.729
52 253717_at AT4G29440 [Regulator of Vps4 activity in the MVB pathway protein] -0.163 0.205
53 266625_at AT2G35380 [Peroxidase superfamily protein] -0.161 0.032
54 254726_at AT4G13660 ATPRR2, PRR2, pinoresinol reductase 2 -0.160 0.224
55 267296_at AT2G23660 LBD10, LOB domain-containing protein 10 -0.156 0.112
56 260560_at AT2G43590 [Chitinase family protein] -0.155 0.406
57 254202_at AT4G24140 [alpha/beta-Hydrolases superfamily protein] -0.152 0.032
58 249108_at AT5G43690 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.135 0.016
59 256681_at AT3G52340 ATSPP2, SUCROSE-PHOSPHATASE 2, SPP2, sucrose-6F-phosphate phosphohydrolase 2 -0.134 -0.201
60 251039_at AT5G02020 SIS, Salt Induced Serine rich -0.133 0.214
61 261640_at AT1G49960 [Xanthine/uracil permease family protein] -0.131 0.099
62 255338_at AT4G04470 PMP22 -0.130 0.072
63 254155_at AT4G24480 [Protein kinase superfamily protein] -0.127 0.211
64 263811_at AT2G04350 LACS8, long-chain acyl-CoA synthetase 8 -0.126 0.225
65 252395_at AT3G47950 AHA4, H(+)-ATPase 4, HA4, H(+)-ATPase 4 -0.125 0.062
66 254215_at AT4G23700 ATCHX17, cation/H+ exchanger 17, CHX17, cation/H+ exchanger 17 -0.121 1.028
67 246284_at AT4G36780 BEH2, BES1/BZR1 homolog 2 -0.117 0.100
68 244904_at ATMG00670 ORF275 -0.117 0.070
69 258944_at AT3G10390 FLD, FLOWERING LOCUS D -0.115 0.079
70 265856_at AT2G42430 ASL18, ASYMMETRIC LEAVES2-LIKE 18, LBD16, lateral organ boundaries-domain 16 -0.115 0.113
71 247706_at AT5G59480 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.115 0.145
72 247967_at AT5G56620 anac099, NAC domain containing protein 99, NAC099, NAC domain containing protein 99 -0.114 0.053
73 265170_at AT1G23730 ATBCA3, BETA CARBONIC ANHYDRASE 3, BCA3, beta carbonic anhydrase 3 -0.114 0.487