4.0:Information of module
root - 04% oxygen - 48h
In comparison with Light help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0001666 response to hypoxia BP 9.846e-20
GO:0036293 response to decreased oxygen levels BP 1.781e-19
GO:0070482 response to oxygen levels BP 1.781e-19
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0051649 establishment of localization in cell BP 6.534e-04
GO:0006623 protein targeting to vacuole BP 1.179e-03
GO:0072665 protein localization to vacuole BP 1.179e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
root - 04% oxygen - 48h		 Log2 signal ratio
Light
1 260869_at AT1G43800 FTM1, FLORAL TRANSITION AT THE MERISTEM1, SAD6, STEAROYL-ACYL CARRIER PROTEIN Δ9-DESATURASE6 1.276 0.848
2 255807_at AT4G10270 [Wound-responsive family protein] 1.266 1.215
3 253298_at AT4G33560 [Wound-responsive family protein] 1.091 0.995
4 245226_at AT3G29970 [B12D protein] 1.007 0.878
5 264846_at AT2G17850 [Rhodanese/Cell cycle control phosphatase superfamily protein] 0.976 0.539
6 252746_at AT3G43190 ATSUS4, ARABIDOPSIS THALIANA SUCROSE SYNTHASE 4, SUS4, sucrose synthase 4 0.905 0.069
7 254200_at AT4G24110 unknown 0.785 0.570
8 249384_at AT5G39890 unknown 0.714 0.404
9 265948_at AT2G19590 ACO1, ACC oxidase 1, ATACO1 0.706 0.042
10 263096_at AT2G16060 AHB1, hemoglobin 1, ARATH GLB1, ATGLB1, GLB1, CLASS I HEMOGLOBIN, HB1, hemoglobin 1, NSHB1 0.648 0.317
11 258930_at AT3G10040 [sequence-specific DNA binding transcription factors] 0.645 0.815
12 257153_at AT3G27220 [Galactose oxidase/kelch repeat superfamily protein] 0.618 0.481
13 257947_at AT3G21720 ICL, isocitrate lyase 0.610 -0.014
14 264953_at AT1G77120 ADH, ALCOHOL DEHYDROGENASE, ADH1, alcohol dehydrogenase 1, ATADH, ARABIDOPSIS THALIANA ALCOHOL DEHYDROGENASE, ATADH1 0.607 0.141
15 245586_at AT4G14980 [Cysteine/Histidine-rich C1 domain family protein] 0.573 -0.033
16 250152_at AT5G15120 unknown 0.553 0.213
17 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 0.551 0.397
18 247431_at AT5G62520 SRO5, similar to RCD one 5 0.533 0.491
19 245173_at AT2G47520 AtERF71, Arabidopsis thaliana ethylene response factor 71, ERF71, ethylene response factor 71, HRE2, HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 2 0.447 0.434
20 258487_at AT3G02550 LBD41, LOB domain-containing protein 41 0.417 0.684
21 258879_at AT3G03270 [Adenine nucleotide alpha hydrolases-like superfamily protein] 0.365 0.215
22 261266_at AT1G26770 AT-EXP10, ARABIDOPSIS THALIANA EXPANSIN 10, ATEXP10, ARABIDOPSIS THALIANA EXPANSIN 10, ATEXPA10, expansin A10, ATHEXP ALPHA 1.1, ARABIDOPSIS THALIANA EXPANSIN ALPHA 1.1, EXP10, EXPANSIN 10, EXPA10, expansin A10 0.345 -0.077
23 245998_at AT5G20830 ASUS1, atsus1, SUS1, sucrose synthase 1 0.339 0.029
24 262679_at AT1G75830 LCR67, low-molecular-weight cysteine-rich 67, PDF1.1, PLANT DEFENSIN 1.1 0.323 -0.026
25 260451_at AT1G72360 AtERF73, ERF73, ethylene response factor 73, HRE1, HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 1 0.308 0.167
26 264469_at AT1G67100 LBD40, LOB domain-containing protein 40 0.296 0.037
27 261567_at AT1G33055 unknown 0.282 0.837
28 249015_at AT5G44730 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] 0.269 0.258
29 245951_at AT5G19550 AAT2, ASPARTATE AMINOTRANSFERASE 2, ASP2, aspartate aminotransferase 2 0.266 0.071
30 247024_at AT5G66985 unknown 0.249 0.876
31 253874_at AT4G27450 [Aluminium induced protein with YGL and LRDR motifs] 0.234 0.269
32 257891_at AT3G17170 RFC3, REGULATOR OF FATTY-ACID COMPOSITION 3 0.226 0.069
33 257021_at AT3G19710 BCAT4, branched-chain aminotransferase4 0.224 -0.148
34 250413_at AT5G11160 APT5, adenine phosphoribosyltransferase 5 0.224 0.063
35 254553_at AT4G19530 [disease resistance protein (TIR-NBS-LRR class) family] 0.209 0.157
36 262383_at AT1G72940 [Toll-Interleukin-Resistance (TIR) domain-containing protein] 0.195 0.139
37 247594_at AT5G60800 [Heavy metal transport/detoxification superfamily protein ] 0.192 0.002
38 248770_at AT5G47740 [Adenine nucleotide alpha hydrolases-like superfamily protein] -0.317 0.160
39 261574_at AT1G01190 CYP78A8, cytochrome P450, family 78, subfamily A, polypeptide 8 -0.302 0.041
40 255127_at AT4G08300 UMAMIT17, Usually multiple acids move in and out Transporters 17 -0.296 -0.006
41 253182_at AT4G35190 LOG5, LONELY GUY 5 -0.268 0.066
42 255877_at AT2G40460 [Major facilitator superfamily protein] -0.264 -0.067
43 261395_at AT1G79700 WRI4, WRINKLED 4 -0.263 -0.001
44 248621_at AT5G49350 [Glycine-rich protein family] -0.248 -0.008
45 245186_at AT1G67710 ARR11, response regulator 11 -0.246 0.090
46 267471_at AT2G30390 ATFC-II, FC-II, FC2, ferrochelatase 2 -0.208 -0.000
47 265983_at AT2G18550 ATHB21, homeobox protein 21, HB-2, homeobox-2, HB21, homeobox protein 21 -0.195 0.023
48 260599_at AT1G55940 CYP708A1, cytochrome P450, family 708, subfamily A, polypeptide 1 -0.191 -0.009
49 259618_at AT1G48000 AtMYB112, myb domain protein 112, MYB112, myb domain protein 112 -0.175 0.073
50 245748_at AT1G51140 AKS1, ABA-responsive kinase substrate 1, FBH3, FLOWERING BHLH 3 -0.171 -0.150
51 251191_at AT3G62590 [alpha/beta-Hydrolases superfamily protein] -0.164 -0.107
52 253717_at AT4G29440 [Regulator of Vps4 activity in the MVB pathway protein] -0.163 0.096
53 266625_at AT2G35380 [Peroxidase superfamily protein] -0.161 0.029
54 254726_at AT4G13660 ATPRR2, PRR2, pinoresinol reductase 2 -0.160 -0.048
55 267296_at AT2G23660 LBD10, LOB domain-containing protein 10 -0.156 0.090
56 260560_at AT2G43590 [Chitinase family protein] -0.155 0.068
57 254202_at AT4G24140 [alpha/beta-Hydrolases superfamily protein] -0.152 0.018
58 249108_at AT5G43690 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.135 -0.011
59 256681_at AT3G52340 ATSPP2, SUCROSE-PHOSPHATASE 2, SPP2, sucrose-6F-phosphate phosphohydrolase 2 -0.134 0.009
60 251039_at AT5G02020 SIS, Salt Induced Serine rich -0.133 -0.151
61 261640_at AT1G49960 [Xanthine/uracil permease family protein] -0.131 0.059
62 255338_at AT4G04470 PMP22 -0.130 -0.077
63 254155_at AT4G24480 [Protein kinase superfamily protein] -0.127 -0.012
64 263811_at AT2G04350 LACS8, long-chain acyl-CoA synthetase 8 -0.126 -0.008
65 252395_at AT3G47950 AHA4, H(+)-ATPase 4, HA4, H(+)-ATPase 4 -0.125 0.005
66 254215_at AT4G23700 ATCHX17, cation/H+ exchanger 17, CHX17, cation/H+ exchanger 17 -0.121 -0.105
67 246284_at AT4G36780 BEH2, BES1/BZR1 homolog 2 -0.117 0.049
68 244904_at ATMG00670 ORF275 -0.117 0.020
69 258944_at AT3G10390 FLD, FLOWERING LOCUS D -0.115 0.022
70 265856_at AT2G42430 ASL18, ASYMMETRIC LEAVES2-LIKE 18, LBD16, lateral organ boundaries-domain 16 -0.115 0.022
71 247706_at AT5G59480 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.115 0.009
72 247967_at AT5G56620 anac099, NAC domain containing protein 99, NAC099, NAC domain containing protein 99 -0.114 -0.005
73 265170_at AT1G23730 ATBCA3, BETA CARBONIC ANHYDRASE 3, BCA3, beta carbonic anhydrase 3 -0.114 0.083