4.0:Information of module
erf104-ko Flg22 4h
In comparison with Regenerating Stump Root Tip Cut 130 mm andn Recut 13 hrs Taking 70 mm of Stump (4dpg) help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0050896 response to stimulus BP 9.136e-22
GO:0006950 response to stress BP 1.097e-20
GO:0042221 response to chemical BP 5.592e-19
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0016556 mRNA modification BP 3.548e-16
GO:0010016 shoot system morphogenesis BP 1.580e-12
GO:0009965 leaf morphogenesis BP 4.759e-11
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
erf104-ko Flg22 4h		 Log2 signal ratio
Regenerating Stump Root Tip Cut 130 mm andn Recut 13 hrs Taking 70 mm of Stump (4dpg)
1 261005_at AT1G26420 [FAD-binding Berberine family protein] 0.958 -0.570
2 250798_at AT5G05340 PRX52, peroxidase 52 0.889 0.340
3 264886_at AT1G61120 GES, GERANYLLINALOOL SYNTHASE, TPS04, terpene synthase 04, TPS4, TERPENE SYNTHASE 4 0.884 -0.537
4 266737_at AT2G47140 AtSDR5, SDR5, short-chain dehydrogenase reductase 5 0.806 0.586
5 266967_at AT2G39530 [Uncharacterised protein family (UPF0497)] 0.796 -0.230
6 252098_at AT3G51330 [Eukaryotic aspartyl protease family protein] 0.791 0.079
7 267588_at AT2G42060 [Cysteine/Histidine-rich C1 domain family protein] 0.746 -0.885
8 265186_at AT1G23560 unknown 0.746 -0.334
9 267548_at AT2G32660 AtRLP22, receptor like protein 22, RLP22, receptor like protein 22 0.745 -0.297
10 265482_at AT2G15780 [Cupredoxin superfamily protein] 0.722 -0.449
11 248971_at AT5G45000 [Disease resistance protein (TIR-NBS-LRR class) family] 0.710 -0.821
12 254271_at AT4G23150 CRK7, cysteine-rich RLK (RECEPTOR-like protein kinase) 7 0.710 -0.474
13 246373_at AT1G51860 [Leucine-rich repeat protein kinase family protein] 0.696 -0.539
14 258203_at AT3G13950 unknown 0.694 -0.258
15 257479_at AT1G16150 WAKL4, wall associated kinase-like 4 0.676 -0.035
16 263378_at AT2G40180 ATHPP2C5, phosphatase 2C5, PP2C5, phosphatase 2C5 0.671 -0.228
17 251097_at AT5G01560 LecRK-VI.4, L-type lectin receptor kinase VI.4, LECRKA4.3, lectin receptor kinase a4.3 0.667 0.090
18 249101_at AT5G43580 UPI, UNUSUAL SERINE PROTEASE INHIBITOR 0.663 0.311
19 259120_at AT3G02240 GLV4, GOLVEN 4, RGF7, root meristem growth factor 7 0.655 -0.377
20 248090_at AT5G55090 MAPKKK15, mitogen-activated protein kinase kinase kinase 15 0.640 -0.680
21 254253_at AT4G23320 CRK24, cysteine-rich RLK (RECEPTOR-like protein kinase) 24 0.619 0.269
22 246370_at AT1G51920 unknown 0.616 -0.942
23 254660_at AT4G18250 [receptor serine/threonine kinase, putative] 0.607 -0.036
24 253626_at AT4G30640 [RNI-like superfamily protein] 0.607 -0.487
25 266010_at AT2G37430 ZAT11, zinc finger of Arabidopsis thaliana 11 0.606 0.817
26 247205_at AT5G64890 PROPEP2, elicitor peptide 2 precursor 0.596 -0.686
27 246228_at AT4G36430 [Peroxidase superfamily protein] 0.595 0.959
28 246368_at AT1G51890 [Leucine-rich repeat protein kinase family protein] 0.594 -0.324
29 263948_at AT2G35980 ATNHL10, ARABIDOPSIS NDR1/HIN1-LIKE 10, NHL10, NDR1/HIN1-LIKE, YLS9, YELLOW-LEAF-SPECIFIC GENE 9 0.593 -0.651
30 254819_at AT4G12500 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.582 -0.590
31 252346_at AT3G48650 [pseudogene] 0.572 -0.723
32 262630_at AT1G06520 ATGPAT1, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 1, GPAT1, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 1, sn-2-GPAT1, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 1 0.569 -0.977
33 247753_at AT5G59070 [UDP-Glycosyltransferase superfamily protein] 0.568 0.797
34 263937_at AT2G35910 [RING/U-box superfamily protein] 0.565 0.575
35 257950_at AT3G21780 UGT71B6, UDP-glucosyl transferase 71B6 0.558 0.354
36 245089_at AT2G45290 TKL2, transketolase 2 0.557 0.258
37 261198_at AT1G12940 ATNRT2.5, nitrate transporter2.5, NRT2.5, nitrate transporter2.5 0.545 -0.891
38 249364_at AT5G40590 [Cysteine/Histidine-rich C1 domain family protein] 0.542 -1.113
39 250286_at AT5G13320 AtGH3.12, GDG1, GH3-LIKE DEFENSE GENE 1, GH3.12, GRETCHEN HAGEN 3.12, PBS3, AVRPPHB SUSCEPTIBLE 3, WIN3, HOPW1-1-INTERACTING 3 0.530 -0.742
40 251980_at AT3G53270 [Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein] 0.525 -0.236
41 247145_at AT5G65600 LecRK-IX.2, L-type lectin receptor kinase IX.2 0.522 -0.727
42 248701_at AT5G48410 ATGLR1.3, ARABIDOPSIS THALIANA GLUTAMATE RECEPTOR 1.3, GLR1.3, glutamate receptor 1.3 0.511 -0.411
43 252484_at AT3G46690 [UDP-Glycosyltransferase superfamily protein] 0.508 -0.024
44 262131_at AT1G02900 ATRALF1, RAPID ALKALINIZATION FACTOR 1, RALF1, rapid alkalinization factor 1, RALFL1, RALF-LIKE 1 0.506 1.271
45 257835_at AT3G25180 CYP82G1, cytochrome P450, family 82, subfamily G, polypeptide 1 0.504 0.578
46 255511_at AT4G02075 PIT1, pitchoun 1 0.498 0.461
47 255595_at AT4G01700 [Chitinase family protein] 0.484 1.641
48 262942_at AT1G79450 ALIS5, ALA-interacting subunit 5 0.483 -0.381
49 250038_at AT5G18360 [Disease resistance protein (TIR-NBS-LRR class) family] 0.474 -0.818
50 262090_at AT1G55970 HAC04, HAC4, histone acetyltransferase of the CBP family 4, HAC6, HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 6, HAG04, HISTONE ACETYLTRANSFERASE OF THE GNAT/MYST SUPERFAMILY 04, HAG4, HISTONE ACETYLTRANSFERASE OF THE GNAT/MYST SUPERFAMILY 4 0.459 0.643
51 255342_at AT4G04510 CRK38, cysteine-rich RLK (RECEPTOR-like protein kinase) 38 0.455 -0.942
52 251061_at AT5G01830 SAUR21, SMALL AUXIN UP RNA 21 0.442 -0.089
53 266100_at AT2G37980 [O-fucosyltransferase family protein] 0.439 -0.360
54 254836_at AT4G12330 CYP706A7, cytochrome P450, family 706, subfamily A, polypeptide 7 0.433 0.273
55 266992_at AT2G39200 ATMLO12, MILDEW RESISTANCE LOCUS O 12, MLO12, MILDEW RESISTANCE LOCUS O 12 0.432 0.369
56 260904_at AT1G02450 NIMIN-1, NIMIN1, NIM1-interacting 1 0.430 -0.726
57 252862_at AT4G39830 [Cupredoxin superfamily protein] 0.428 0.131
58 254794_at AT4G12970 EPFL9, STOMAGEN, STOMAGEN -0.588 0.389
59 248186_at AT5G53880 unknown -0.577 0.197
60 267361_at AT2G39920 [HAD superfamily, subfamily IIIB acid phosphatase ] -0.548 -0.984
61 261825_at AT1G11545 XTH8, xyloglucan endotransglucosylase/hydrolase 8 -0.450 0.339
62 263595_at AT2G01890 ATPAP8, PURPLE ACID PHOSPHATASE 8, PAP8, purple acid phosphatase 8 -0.438 0.667
63 255899_at AT1G17970 [RING/U-box superfamily protein] -0.431 -0.347
64 256792_at AT3G22150 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.430 0.373
65 261921_at AT1G65900 unknown -0.429 0.834
66 264247_at AT1G60160 [Potassium transporter family protein] -0.416 -0.045
67 248839_at AT5G46690 bHLH071, beta HLH protein 71 -0.406 -0.001
68 263640_at AT2G25270 unknown -0.396 0.972
69 248975_at AT5G45040 CYTC6A, cytochrome c6A -0.393 -0.317
70 258823_at AT3G07200 [RING/U-box superfamily protein] -0.387 -0.185
71 249347_at AT5G40830 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.386 -0.449
72 249383_at AT5G39860 BHLH136, BASIC HELIX-LOOP-HELIX PROTEIN 136, BNQ1, BANQUO 1, PRE1, PACLOBUTRAZOL RESISTANCE1 -0.383 -0.118
73 246275_at AT4G36540 BEE2, BR enhanced expression 2 -0.376 -0.883
74 255774_at AT1G18620 TRM3, TON1 Recruiting Motif 3 -0.366 -0.353
75 262370_at AT1G73090 unknown -0.360 -0.647
76 248681_at AT5G48900 [Pectin lyase-like superfamily protein] -0.359 0.850
77 253966_at AT4G26520 AtFBA7, FBA7, fructose-bisphosphate aldolase 7 -0.357 -0.499
78 259373_at AT1G69160 unknown -0.357 -0.788
79 264672_at AT1G09750 [Eukaryotic aspartyl protease family protein] -0.356 0.347
80 263674_at AT2G04790 unknown -0.349 -0.059
81 255437_at AT4G03060 AOP2, alkenyl hydroxalkyl producing 2 -0.345 0.250
82 256598_at AT3G30180 BR6OX2, brassinosteroid-6-oxidase 2, CYP85A2 -0.341 -0.127
83 247980_at AT5G56860 GATA21, GATA TRANSCRIPTION FACTOR 21, GNC, GATA, nitrate-inducible, carbon metabolism-involved -0.338 -0.585
84 266215_at AT2G06850 EXGT-A1, endoxyloglucan transferase A1, EXT, ENDOXYLOGLUCAN TRANSFERASE, XTH4, xyloglucan endotransglucosylase/hydrolase 4 -0.332 1.288
85 256626_at AT3G20015 [Eukaryotic aspartyl protease family protein] -0.332 0.600
86 263442_at AT2G28605 [Photosystem II reaction center PsbP family protein] -0.326 -0.144
87 265400_at AT2G10940 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.323 -0.206
88 248075_at AT5G55740 CRR21, chlororespiratory reduction 21 -0.320 -1.055
89 265121_at AT1G62560 FMO GS-OX3, flavin-monooxygenase glucosinolate S-oxygenase 3 -0.317 -0.145
90 265663_at AT2G24290 unknown -0.317 0.618
91 245262_at AT4G16563 [Eukaryotic aspartyl protease family protein] -0.315 -0.054
92 267586_at AT2G41950 unknown -0.314 0.823
93 246492_at AT5G16140 [Peptidyl-tRNA hydrolase family protein] -0.313 0.223
94 248853_at AT5G46570 BSK2, brassinosteroid-signaling kinase 2 -0.313 0.840
95 256237_at AT3G12610 DRT100, DNA-DAMAGE REPAIR/TOLERATION 100 -0.308 0.778
96 259160_at AT3G05410 [Photosystem II reaction center PsbP family protein] -0.308 -0.404
97 258222_at AT3G15680 [Ran BP2/NZF zinc finger-like superfamily protein] -0.308 0.104
98 258368_at AT3G14240 [Subtilase family protein] -0.303 0.555
99 259431_at AT1G01620 PIP1;3, PLASMA MEMBRANE INTRINSIC PROTEIN 1;3, PIP1C, plasma membrane intrinsic protein 1C, TMP-B -0.302 0.627
100 246995_at AT5G67470 ATFH6, ARABIDOPSIS FORMIN HOMOLOG 6, FH6, formin homolog 6 -0.301 -0.088
101 249554_at AT5G38290 [Peptidyl-tRNA hydrolase family protein] -0.300 0.988
102 255817_at AT2G33330 PDLP3, plasmodesmata-located protein 3 -0.300 0.165
103 245215_at AT1G67830 ATFXG1, Arabidopsis thaliana alpha-fucosidase 1, FXG1, alpha-fucosidase 1 -0.298 -0.189
104 254427_at AT4G21190 emb1417, embryo defective 1417 -0.297 -0.099
105 255118_at AT4G08790 [Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein] -0.297 0.611
106 255818_at AT2G33570 GALS1, galactan synthase 1 -0.296 -0.309
107 263549_at AT2G21650 ATRL2, ARABIDOPSIS RAD-LIKE 2, MEE3, MATERNAL EFFECT EMBRYO ARREST 3, RSM1, RADIALIS-LIKE SANT/MYB 1 -0.296 0.154
108 250938_at AT5G03180 [RING/U-box superfamily protein] -0.291 -0.342
109 245876_at AT1G26230 Cpn60beta4, chaperonin-60beta4 -0.291 0.005
110 250167_at AT5G15310 ATMIXTA, ATMYB16, myb domain protein 16, MYB16, myb domain protein 16 -0.288 -0.890
111 257510_at AT1G55360 unknown -0.287 0.833
112 252433_at AT3G47560 [alpha/beta-Hydrolases superfamily protein] -0.285 -0.213
113 245383_at AT4G17810 [C2H2 and C2HC zinc fingers superfamily protein] -0.283 0.495