4.0:Information of module
Col-0 overexpressing At1g54160 control
In comparison with Shoot submergence 24h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006457 protein folding BP 9.410e-12
GO:0009987 cellular process BP 9.406e-10
GO:0009408 response to heat BP 2.334e-09
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0050896 response to stimulus BP 2.877e-07
GO:0010033 response to organic substance BP 1.919e-06
GO:0042221 response to chemical BP 6.604e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Col-0 overexpressing At1g54160 control		 Log2 signal ratio
Shoot submergence 24h
1 262517_at AT1G17180 ATGSTU25, glutathione S-transferase TAU 25, GSTU25, glutathione S-transferase TAU 25 0.478 -0.081
2 262518_at AT1G17170 ATGSTU24, glutathione S-transferase TAU 24, GST, Arabidopsis thaliana Glutathione S-transferase (class tau) 24, GSTU24, glutathione S-transferase TAU 24 0.332 0.177
3 266098_at AT2G37870 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.326 0.060
4 253411_at AT4G32980 ATH1, homeobox gene 1 0.271 -0.658
5 259481_at AT1G18970 GLP4, germin-like protein 4 0.253 0.007
6 252515_at AT3G46230 ATHSP17.4, ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.4, HSP17.4, heat shock protein 17.4 0.225 0.097
7 263495_at AT2G42530 COR15B, cold regulated 15b 0.211 -0.993
8 247962_at AT5G56580 ANQ1, ARABIDOPSIS NQK1, ATMKK6, ARABIDOPSIS THALIANA MAP KINASE KINASE 6, MKK6, MAP kinase kinase 6 0.210 -0.510
9 259632_at AT1G56430 ATNAS4, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 4, NAS4, nicotianamine synthase 4 0.205 -0.717
10 247717_at AT5G59320 LTP3, lipid transfer protein 3 0.176 -1.062
11 247814_at AT5G58310 ATMES18, ARABIDOPSIS THALIANA METHYL ESTERASE 18, MES18, methyl esterase 18 0.174 -1.153
12 254233_at AT4G23800 3xHMG-box2, 3xHigh Mobility Group-box2 0.168 -0.792
13 253687_at AT4G29520 [LOCATED IN: endoplasmic reticulum, plasma membrane] 0.167 -0.489
14 253757_at AT4G28950 ARAC7, Arabidopsis RAC-like 7, ATRAC7, ATROP9, RAC7, ROP9, RHO-related protein from plants 9 0.165 -0.342
15 261921_at AT1G65900 unknown 0.160 -0.769
16 260745_at AT1G78370 ATGSTU20, glutathione S-transferase TAU 20, GSTU20, glutathione S-transferase TAU 20 0.156 -1.190
17 259275_at AT3G01060 unknown 0.154 -0.412
18 247781_at AT5G58784 [Undecaprenyl pyrophosphate synthetase family protein] 0.145 -0.110
19 260517_at AT1G51420 ATSPP1, SUCROSE-PHOSPHATASE 1, SPP1, sucrose-phosphatase 1 0.144 0.011
20 259757_at AT1G77510 ATPDI6, PROTEIN DISULFIDE ISOMERASE 6, ATPDIL1-2, PDI-like 1-2, PDI6, PROTEIN DISULFIDE ISOMERASE 6, PDIL1-2, PDI-like 1-2 0.140 -0.192
21 264293_at AT1G78770 APC6, anaphase promoting complex 6 0.135 -0.431
22 261330_at AT1G44900 ATMCM2, MCM2, MINICHROMOSOME MAINTENANCE 2 0.131 -0.839
23 245343_at AT4G15830 [ARM repeat superfamily protein] 0.127 -0.742
24 264369_at AT1G70430 [Protein kinase superfamily protein] 0.126 -0.203
25 267232_at AT2G44190 EDE1, ENDOSPERM DEFECTIVE 1, EMB3116, EMBRYO DEFECTIVE 3116, QWRF5, QWRF domain containing 5 0.124 -0.183
26 256049_at AT1G07010 AtSLP1, SLP1, Shewenella-like protein phosphatase 1 0.121 -0.290
27 264201_at AT1G22630 unknown 0.120 -0.514
28 253480_at AT4G31840 AtENODL15, ENODL15, early nodulin-like protein 15 0.117 -0.632
29 251182_at AT3G62600 ATERDJ3B, ERDJ3B 0.106 -0.222
30 259852_at AT1G72280 AERO1, endoplasmic reticulum oxidoreductins 1, ERO1, endoplasmic reticulum oxidoreductins 1 0.105 -0.133
31 262470_at AT1G50180 [NB-ARC domain-containing disease resistance protein] 0.099 -0.027
32 257005_at AT3G14190 CMR1, COPPER MODIFIED RESISTANCE 1 0.099 -0.592
33 267549_at AT2G32640 [Lycopene beta/epsilon cyclase protein] 0.099 -0.687
34 247591_at AT5G60770 ATNRT2.4, ARABIDOPSIS THALIANA NITRATE TRANSPORTER 2.4, NRT2.4, nitrate transporter 2.4 0.098 -0.002
35 262109_at AT1G02730 ATCSLD5, cellulose synthase-like D5, CSLD5, CELLULOSE SYNTHASE LIKE D5, CSLD5, cellulose synthase-like D5, SOS6, SALT OVERLY SENSITIVE 6 0.098 -0.815
36 247319_at AT5G64050 ATERS, ERS, glutamate tRNA synthetase, OVA3, OVULE ABORTION 3 0.097 -0.316
37 245385_at AT4G14020 [Rapid alkalinization factor (RALF) family protein] 0.097 0.245
38 253841_at AT4G27830 AtBGLU10, BGLU10, beta glucosidase 10 0.096 -0.251
39 261016_at AT1G26560 BGLU40, beta glucosidase 40 0.096 -0.805
40 265722_at AT2G40100 LHCB4.3, light harvesting complex photosystem II 0.095 -0.752
41 255591_at AT4G01630 ATEXP17, EXPANSIN 17, ATEXPA17, expansin A17, ATHEXP ALPHA 1.13, EXPA17, expansin A17 0.095 -0.211
42 258613_at AT3G02870 VTC4 0.094 -0.569
43 254644_at AT4G18510 CLE2, CLAVATA3/ESR-related 2 -0.345 0.093
44 255608_at AT4G01140 unknown -0.232 0.058
45 264577_at AT1G05260 RCI3, RARE COLD INDUCIBLE GENE 3, RCI3A -0.214 -0.109
46 249729_at AT5G24410 PGL4, 6-phosphogluconolactonase 4 -0.198 0.137
47 259365_at AT1G13300 HRS1, HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1 -0.197 0.028
48 250533_at AT5G08640 ATFLS1, FLS, FLAVONOL SYNTHASE, FLS1, flavonol synthase 1 -0.195 -1.182
49 259260_at AT3G11370 [Cysteine/Histidine-rich C1 domain family protein] -0.192 0.086
50 249454_at AT5G39520 unknown -0.181 1.253
51 246991_at AT5G67400 RHS19, root hair specific 19 -0.173 -0.113
52 250664_at AT5G07080 [HXXXD-type acyl-transferase family protein] -0.157 0.038
53 249065_at AT5G44260 AtTZF5, TZF5, Tandem CCCH Zinc Finger protein 5 -0.156 1.091
54 252539_at AT3G45730 unknown -0.151 1.061
55 256774_at AT3G13760 [Cysteine/Histidine-rich C1 domain family protein] -0.148 0.093
56 258209_at AT3G14060 unknown -0.147 0.461
57 263295_at AT2G14210 AGL44, AGAMOUS-like 44, ANR1, ARABIDOPSIS NITRATE REGULATED 1 -0.144 0.141
58 263765_at AT2G21540 ATSFH3, SEC14-LIKE 3, SFH3, SEC14-like 3 -0.142 0.063
59 249408_at AT5G40330 ATMYB23, MYB DOMAIN PROTEIN 23, ATMYBRTF, MYB23, myb domain protein 23 -0.134 0.054
60 247264_at AT5G64530 ANAC104, Arabidopsis NAC domain containing protein 104, XND1, xylem NAC domain 1 -0.133 -0.256
61 262552_at AT1G31350 KUF1, KAR-UP F-box 1 -0.129 0.146
62 254743_at AT4G13420 ATHAK5, ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5, HAK5, high affinity K+ transporter 5 -0.129 -0.104
63 261431_at AT1G18710 AtMYB47, myb domain protein 47, MYB47, myb domain protein 47 -0.126 -0.507
64 267178_at AT2G37750 unknown -0.125 0.830
65 247933_at AT5G56980 unknown -0.123 -0.072
66 251330_at AT3G61550 [RING/U-box superfamily protein] -0.118 -0.224
67 247072_at AT5G66490 unknown -0.118 0.255
68 255568_at AT4G01250 AtWRKY22, WRKY22 -0.116 0.805
69 250099_at AT5G17300 RVE1, REVEILLE 1 -0.112 0.598
70 249783_at AT5G24270 ATSOS3, SALT OVERLY SENSITIVE 3, CBL4, CALCINEURIN B-LIKE PROTEIN 4, SOS3, SALT OVERLY SENSITIVE 3 -0.111 0.915
71 265265_at AT2G42900 [Plant basic secretory protein (BSP) family protein] -0.111 0.386
72 264425_at AT1G61750 [Receptor-like protein kinase-related family protein] -0.111 0.095
73 251061_at AT5G01830 SAUR21, SMALL AUXIN UP RNA 21 -0.111 0.165
74 252950_at AT4G38690 [PLC-like phosphodiesterases superfamily protein] -0.108 0.177
75 250881_at AT5G04080 unknown -0.108 -0.143
76 261658_at AT1G50040 unknown -0.107 0.798
77 264580_at AT1G05340 unknown -0.106 1.063
78 266396_at AT2G38790 unknown -0.103 0.193
79 262205_at AT2G01080 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] -0.101 0.596
80 259822_at AT1G66230 AtMYB20, myb domain protein 20, MYB20, myb domain protein 20 -0.101 -0.117
81 263797_at AT2G24570 ATWRKY17, WRKY17, WRKY DNA-binding protein 17 -0.099 -0.209
82 258385_at AT3G15510 ANAC056, Arabidopsis NAC domain containing protein 56, ATNAC2, NAC domain containing protein 2, NAC2, NAC domain containing protein 2, NARS1, NAC-REGULATED SEED MORPHOLOGY 1 -0.098 0.215
83 255481_at AT4G02460 AtPMS1, PMS1, POSTMEIOTIC SEGREGATION 1 -0.097 -0.197