4.0:Information of module
pGL3::GL3-GR Dex 24hours
In comparison with xyl-grown cell culture- 1h 1mM Suc help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0055067 monovalent inorganic cation homeostasis BP 3.088e-03
GO:0010035 response to inorganic substance BP 7.066e-03
GO:0050801 ion homeostasis BP 7.072e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0000103 sulfate assimilation BP 1.988e-03
GO:0009074 aromatic amino acid family catabolic pro... BP 3.372e-03
GO:0009063 cellular amino acid catabolic process BP 6.290e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
pGL3::GL3-GR Dex 24hours		 Log2 signal ratio
xyl-grown cell culture- 1h 1mM Suc
1 267238_at AT2G44130 KMD3, KISS ME DEADLY 3 0.307 -0.002
2 257654_at AT3G13310 DJC66, DNA J protein C66 0.228 0.054
3 248355_at AT5G52340 ATEXO70A2, exocyst subunit exo70 family protein A2, EXO70A2, exocyst subunit exo70 family protein A2 0.190 -0.016
4 260963_at AT1G44990 unknown 0.177 0.003
5 246686_at AT5G33380 unknown 0.138 0.017
6 245153_at AT5G12450 [FBD-like domain family protein] 0.137 -0.080
7 253027_at AT4G38150 [Pentatricopeptide repeat (PPR) superfamily protein] 0.131 0.004
8 251385_at AT3G60790 [F-box family protein] 0.130 0.092
9 263427_at AT2G22260 ALKBH2, homolog of E. coli alkB 0.126 0.010
10 261533_at AT1G71690 unknown 0.123 0.070
11 247905_at AT5G57400 unknown 0.114 0.002
12 258343_at AT3G22810 [FUNCTIONS IN: phosphoinositide binding] 0.110 -0.051
13 248073_at AT5G55720 [Pectin lyase-like superfamily protein] 0.106 -0.046
14 261425_at AT1G18880 AtNPF2.9, NPF2.9, NRT1/ PTR family 2.9, NRT1.9, nitrate transporter 1.9 0.105 -0.009
15 255339_at AT4G04480 unknown 0.103 0.016
16 259281_at AT3G01140 AtMYB106, myb domain protein 106, MYB106, myb domain protein 106, NOK, NOECK 0.098 0.002
17 263757_at AT2G21430 [Papain family cysteine protease] 0.094 -0.022
18 247061_at AT5G66780 unknown 0.093 0.022
19 250624_at AT5G07330 unknown 0.090 0.007
20 258003_at AT3G29030 ATEXP5, ARABIDOPSIS THALIANA EXPANSIN 5, ATEXPA5, ARABIDOPSIS THALIANA EXPANSIN A5, ATHEXP ALPHA 1.4, EXP5, EXPANSIN 5, EXPA5, expansin A5 -0.183 0.038
21 250956_at AT5G03210 AtDIP2, DIP2, DBP-interacting protein 2 -0.182 0.077
22 253293_at AT4G33905 [Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein] -0.164 0.094
23 267141_at AT2G38090 [Duplicated homeodomain-like superfamily protein] -0.151 0.008
24 266721_at AT2G03220 ATFT1, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, ATFUT1, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, FT1, fucosyltransferase 1, MUR2, MURUS 2 -0.130 0.010
25 252364_at AT3G48450 [RPM1-interacting protein 4 (RIN4) family protein] -0.128 0.023
26 267529_at AT2G45490 AtAUR3, ataurora3, AUR3, ataurora3 -0.127 0.010
27 259566_at AT1G20520 unknown -0.118 -0.004
28 249167_at AT5G42860 unknown -0.116 -0.006
29 255177_at AT4G08040 ACS11, 1-aminocyclopropane-1-carboxylate synthase 11 -0.111 0.026
30 250992_at AT5G02260 ATEXP9, ATEXPA9, expansin A9, ATHEXP ALPHA 1.10, EXP9, EXPA9, expansin A9 -0.110 -0.064
31 264600_at AT1G04730 CTF18, CHROMOSOME TRANSMISSION FIDELITY 18 -0.109 -0.039
32 260941_at AT1G44970 [Peroxidase superfamily protein] -0.107 0.072
33 250789_at AT5G05630 PUT3, POLYAMINE UPTAKE TRANSPORTER 3, RMV1, resistant to methyl viologen 1 -0.106 -0.022
34 267192_at AT2G30890 [Cytochrome b561/ferric reductase transmembrane protein family] -0.097 0.023
35 267137_at AT2G23410 ACPT, cis-prenyltransferase, AtcPT3, CPT, cis-prenyltransferase, cPT3, cis-prenyltransferase 3 -0.097 0.030
36 250026_at AT5G18090 [AP2/B3-like transcriptional factor family protein] -0.091 0.055
37 266749_at AT2G47060 PTI1-4, Pto-interacting 1-4 -0.088 0.024
38 250653_at AT5G06930 [LOCATED IN: chloroplast] -0.088 -0.054