4.0:Information of module
Apex mir-3TCP 14DAS
In comparison with Shoot submergence 24h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009165 nucleotide biosynthetic process BP 8.384e-07
GO:1901293 nucleoside phosphate biosynthetic proces... BP 8.985e-07
GO:0072527 pyrimidine-containing compound metabolic... BP 1.574e-06
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0071456 cellular response to hypoxia BP 7.342e-03
GO:0034284 response to monosaccharide BP 8.668e-03
GO:0009740 gibberellic acid mediated signaling path... BP 9.526e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Apex mir-3TCP 14DAS		 Log2 signal ratio
Shoot submergence 24h
1 261684_at AT1G47400 unknown 0.191 -0.569
2 263549_at AT2G21650 ATRL2, ARABIDOPSIS RAD-LIKE 2, MEE3, MATERNAL EFFECT EMBRYO ARREST 3, RSM1, RADIALIS-LIKE SANT/MYB 1 0.182 -0.600
3 252319_at AT3G48710 [DEK domain-containing chromatin associated protein] 0.142 0.104
4 265214_at AT1G05000 AtPFA-DSP1, PFA-DSP1, plant and fungi atypical dual-specificity phosphatase 1 0.127 0.053
5 264987_at AT1G27030 unknown 0.125 -0.240
6 263535_at AT2G24970 unknown 0.125 -0.549
7 254800_at AT4G13070 [RNA-binding CRS1 / YhbY (CRM) domain protein] 0.121 0.086
8 252442_at AT3G46940 DUT1, DUTP-PYROPHOSPHATASE-LIKE 1 0.115 -0.606
9 261086_at AT1G17460 TRFL3, TRF-like 3 0.113 0.152
10 266406_at AT2G38570 unknown 0.112 -0.267
11 258965_at AT3G10530 [Transducin/WD40 repeat-like superfamily protein] 0.107 -0.475
12 266567_at AT2G24050 eIFiso4G2, eukaryotic translation Initiation Factor isoform 4G2 0.105 -0.356
13 250388_at AT5G11310 [Pentatricopeptide repeat (PPR) superfamily protein] 0.102 0.016
14 260090_at AT1G73310 scpl4, serine carboxypeptidase-like 4 0.102 -0.028
15 262330_at AT1G64070 RLM1, RESISTANCE TO LEPTOSPHAERIA MACULANS 1 0.096 0.135
16 264696_at AT1G70230 AXY4, ALTERED XYLOGLUCAN 4, TBL27, TRICHOME BIREFRINGENCE-LIKE 27 0.095 -0.028
17 252360_at AT3G48480 [Cysteine proteinases superfamily protein] 0.095 -0.126
18 253408_at AT4G32950 [Protein phosphatase 2C family protein] 0.095 0.186
19 257498_at AT1G69660 [TRAF-like family protein] 0.093 0.001
20 253479_at AT4G32360 [Pyridine nucleotide-disulphide oxidoreductase family protein] 0.093 0.099
21 248621_at AT5G49350 [Glycine-rich protein family] 0.093 0.086
22 263415_at AT2G17250 EMB2762, EMBRYO DEFECTIVE 2762, NOC4, NucleOlar Complex associated 4 0.090 -0.256
23 256230_at AT3G12340 [FKBP-like peptidyl-prolyl cis-trans isomerase family protein] 0.089 -0.214
24 266903_at AT2G34570 MEE21, maternal effect embryo arrest 21 0.089 -0.209
25 266358_at AT2G32280 VCC, VASCULATURE COMPLEXITY AND CONNECTIVITY 0.089 0.001
26 254581_at AT4G19440 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.089 -0.070
27 267148_at AT2G23470 RUS4, ROOT UV-B SENSITIVE 4 0.088 -0.173
28 247606_at AT5G61000 ATRPA70D, RPA70D 0.087 -0.488
29 250064_at AT5G17890 CHS3, CHILLING SENSITIVE 3, DAR4, DA1-related protein 4 0.086 0.228
30 254901_at AT4G11530 CRK34, cysteine-rich RLK (RECEPTOR-like protein kinase) 34 0.085 0.249
31 256940_at AT3G30720 QQS, QUA-QUINE STARCH -1.124 0.475
32 252983_at AT4G37980 ATCAD7, CAD7, CINNAMYL-ALCOHOL DEHYDROGENASE 7, ELI3, ELICITOR-ACTIVATED GENE 3, ELI3-1, elicitor-activated gene 3-1 -0.411 0.141
33 267550_at AT2G32800 AP4.3A, LecRK-S.2, L-type lectin receptor kinase S.2 -0.229 0.158
34 266383_at AT2G14580 ATPRB1, basic pathogenesis-related protein 1, PRB1, basic pathogenesis-related protein 1 -0.210 -0.240
35 247949_at AT5G57220 CYP81F2, cytochrome P450, family 81, subfamily F, polypeptide 2 -0.176 0.593
36 247072_at AT5G66490 unknown -0.154 0.255
37 263233_at AT1G05577 unknown -0.140 0.006
38 247585_at AT5G60680 unknown -0.140 0.362
39 253125_at AT4G36040 DJC23, DNA J protein C23, J11, DnaJ11 -0.138 0.511
40 246432_at AT5G17490 AtRGL3, RGL3, RGA-like protein 3 -0.132 0.236
41 260403_at AT1G69810 ATWRKY36, WRKY36, WRKY DNA-binding protein 36 -0.127 0.060
42 262635_at AT1G06570 HPD, 4-hydroxyphenylpyruvate dioxygenase, HPPD, 4-hydroxyphenylpyruvate dioxygenase, PDS1, phytoene desaturation 1 -0.126 0.499
43 267372_at AT2G26290 ARSK1, root-specific kinase 1 -0.122 0.037
44 254948_at AT4G11000 [Ankyrin repeat family protein] -0.117 0.016
45 260556_at AT2G43620 [Chitinase family protein] -0.115 0.553
46 255255_at AT4G05070 [Wound-responsive family protein] -0.111 0.541
47 264124_at AT1G79360 ATOCT2, organic cation/carnitine transporter 2, OCT2, ORGANIC CATION TRANSPORTER 2, OCT2, organic cation/carnitine transporter 2 -0.109 0.955
48 258282_at AT3G26910 [hydroxyproline-rich glycoprotein family protein] -0.108 0.213
49 262789_at AT1G10810 [NAD(P)-linked oxidoreductase superfamily protein] -0.102 0.059
50 255221_at AT4G05150 [Octicosapeptide/Phox/Bem1p family protein] -0.097 0.415
51 252906_at AT4G39640 GGT1, gamma-glutamyl transpeptidase 1 -0.095 0.203
52 266231_at AT2G02220 ATPSKR1, PHYTOSULFOKIN RECEPTOR 1, PSKR1, phytosulfokin receptor 1 -0.093 0.626
53 251996_at AT3G52840 BGAL2, beta-galactosidase 2 -0.093 0.168
54 250877_at AT5G04040 SDP1, SUGAR-DEPENDENT1 -0.092 0.469
55 246975_at AT5G24890 unknown -0.091 0.420
56 259549_at AT1G35290 ALT1, acyl-lipid thioesterase 1 -0.090 -0.277
57 253588_at AT4G30790 [INVOLVED IN: autophagy] -0.087 0.343
58 263858_at AT2G04370 unknown -0.087 0.031
59 267424_at AT2G34800 unknown -0.086 0.072