4.0:Information of module
35S-MIF1 light grown
In comparison with CLO 4mM help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006694 steroid biosynthetic process BP 2.696e-06
GO:1901700 response to oxygen-containing compound BP 4.701e-06
GO:0010162 seed dormancy process BP 1.034e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009825 multidimensional cell growth BP 2.024e-07
GO:0043473 pigmentation BP 5.944e-07
GO:0043476 pigment accumulation BP 5.944e-07
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
35S-MIF1 light grown		 Log2 signal ratio
CLO 4mM
1 253894_at AT4G27150 AT2S2, SESA2, seed storage albumin 2 1.244 -0.053
2 249082_at AT5G44120 ATCRA1, CRUCIFERINA, CRA1, CRUCIFERINA, CRU1 1.211 0.042
3 248236_at AT5G53870 AtENODL1, ENODL1, early nodulin-like protein 1 1.097 0.440
4 253767_at AT4G28520 CRC, CRUCIFERIN C, CRU3, cruciferin 3 1.069 -0.128
5 260226_at AT1G74660 MIF1, mini zinc finger 1 0.999 -0.126
6 253902_at AT4G27170 AT2S4, SESA4, seed storage albumin 4 0.992 -0.045
7 253904_at AT4G27140 AT2S1, SESA1, seed storage albumin 1 0.991 -0.142
8 245970_at AT5G20710 BGAL7, beta-galactosidase 7 0.884 -0.048
9 264079_at AT2G28490 [RmlC-like cupins superfamily protein] 0.875 -0.072
10 253895_at AT4G27160 AT2S3, SESA3, seed storage albumin 3 0.842 -0.115
11 256814_at AT3G21370 BGLU19, beta glucosidase 19 0.822 -0.085
12 248125_at AT5G54740 SESA5, seed storage albumin 5 0.817 -0.086
13 256815_at AT3G21380 [Mannose-binding lectin superfamily protein] 0.775 -0.099
14 254095_at AT4G25140 OLE1, OLEOSIN 1, OLEO1, oleosin 1 0.772 -0.072
15 249353_at AT5G40420 OLE2, OLEOSIN 2, OLEO2, oleosin 2 0.744 -0.030
16 264346_at AT1G12010 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.652 -0.295
17 264433_at AT1G61810 BGLU45, beta-glucosidase 45 0.629 -0.041
18 257129_at AT3G20100 CYP705A19, cytochrome P450, family 705, subfamily A, polypeptide 19 0.622 0.072
19 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] 0.605 0.418
20 257947_at AT3G21720 ICL, isocitrate lyase 0.601 -0.076
21 260716_at AT1G48130 ATPER1, 1-cysteine peroxiredoxin 1, PER1, 1-cysteine peroxiredoxin 1 0.599 -0.072
22 262128_at AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 0.593 0.338
23 249454_at AT5G39520 unknown 0.587 0.318
24 265644_at AT2G27380 ATEPR1, extensin proline-rich 1, EPR1, extensin proline-rich 1 0.582 -0.068
25 248545_at AT5G50260 CEP1, cysteine endopeptidase 1 0.576 0.050
26 262482_at AT1G17020 ATSRG1, SENESCENCE-RELATED GENE 1, SRG1, senescence-related gene 1 0.572 0.452
27 255333_at AT4G04410 [copia-like retrotransposon family, has a 1.7e-176 P-value blast match to dbj|BAA78426.1| polyprotein (AtRE2-1) (Arabidopsis thaliana) (Ty1_Copia-element)] 0.565 -0.092
28 260471_at AT1G11070 unknown 0.554 -0.038
29 266799_at AT2G22860 ATPSK2, phytosulfokine 2 precursor, PSK2, phytosulfokine 2 precursor 0.547 0.202
30 259365_at AT1G13300 HRS1, HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1 0.537 0.020
31 260088_at AT1G73190 ALPHA-TIP, ALPHA-TONOPLAST INTRINSIC PROTEIN, TIP3;1 0.520 -0.071
32 267391_at AT2G44480 BGLU17, beta glucosidase 17 0.518 0.312
33 256073_at AT1G18100 E12A11, MFT, MOTHER OF FT AND TFL1 0.515 -0.093
34 260225_at AT1G74590 ATGSTU10, GLUTATHIONE S-TRANSFERASE TAU 10, GSTU10, glutathione S-transferase TAU 10 0.505 1.005
35 258923_at AT3G10450 SCPL7, serine carboxypeptidase-like 7 0.496 0.271
36 254543_at AT4G19810 ChiC, class V chitinase 0.483 0.053
37 250868_at AT5G03860 MLS, malate synthase 0.474 -0.089
38 262431_at AT1G47540 [Scorpion toxin-like knottin superfamily protein] 0.458 0.041
39 246620_at AT5G36220 CYP81D1, cytochrome P450, family 81, subfamily D, polypeptide 1, CYP91A1, CYTOCHROME P450 91A1 0.457 0.103
40 258327_at AT3G22640 PAP85 0.456 0.017
41 250666_at AT5G07100 WRKY26, WRKY DNA-binding protein 26 0.420 0.567
42 260030_at AT1G68880 AtbZIP, basic leucine-zipper 8, bZIP, basic leucine-zipper 8 0.417 -0.056
43 264301_at AT1G78780 [pathogenesis-related family protein] 0.404 0.400
44 260551_at AT2G43510 ATTI1, trypsin inhibitor protein 1, TI1, trypsin inhibitor protein 1 0.402 0.757
45 265095_at AT1G03880 CRB, CRUCIFERIN B, CRU2, cruciferin 2 0.401 -0.047
46 253392_at AT4G32650 ATKC1, ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1, AtLKT1, A. thaliana low-K+-tolerant 1, KAT3, potassium channel in Arabidopsis thaliana 3, KC1 0.396 0.037
47 254550_at AT4G19690 ATIRT1, ARABIDOPSIS IRON-REGULATED TRANSPORTER 1, IRT1, iron-regulated transporter 1 -0.728 -0.092
48 252317_at AT3G48720 DCF, DEFICIENT IN CUTIN FERULATE -0.698 -0.216
49 252629_at AT3G44970 [Cytochrome P450 superfamily protein] -0.613 0.043
50 251746_at AT3G56060 [Glucose-methanol-choline (GMC) oxidoreductase family protein] -0.583 -0.223
51 246860_at AT5G25840 unknown -0.490 -0.215
52 264195_at AT1G22690 [Gibberellin-regulated family protein] -0.472 -0.134
53 252950_at AT4G38690 [PLC-like phosphodiesterases superfamily protein] -0.463 -0.121
54 258742_at AT3G05800 AIF1, AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 -0.452 -0.342
55 254122_at AT4G24510 CER2, ECERIFERUM 2, VC-2, VC2 -0.426 -0.146
56 248028_at AT5G55620 unknown -0.425 -0.338
57 263765_at AT2G21540 ATSFH3, SEC14-LIKE 3, SFH3, SEC14-like 3 -0.410 -0.384
58 262680_at AT1G75880 [SGNH hydrolase-type esterase superfamily protein] -0.389 -0.150
59 252989_at AT4G38420 sks9, SKU5 similar 9 -0.381 -0.113
60 245088_at AT2G39850 [Subtilisin-like serine endopeptidase family protein] -0.377 -0.146
61 261819_at AT1G11410 [S-locus lectin protein kinase family protein] -0.374 -0.063
62 263876_at AT2G21880 ATRAB7A, RAB GTPase homolog 7A, ATRABG2, ARABIDOPSIS RAB GTPASE HOMOLOG G2, RAB7A, RAB GTPase homolog 7A -0.358 -0.214
63 266600_at AT2G46070 ATMPK12, MAPK12, MPK12, mitogen-activated protein kinase 12 -0.341 -0.106
64 262232_at AT1G68600 [Aluminium activated malate transporter family protein] -0.324 -0.078
65 267010_at AT2G39250 SNZ, SCHNARCHZAPFEN -0.322 -0.149
66 264843_at AT1G03400 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.312 0.017
67 247880_at AT5G57780 P1R1, P1R1 -0.310 -0.279
68 265713_at AT2G03530 ATUPS2, ARABIDOPSIS THALIANA UREIDE PERMEASE 2, UPS2, ureide permease 2 -0.306 -0.009
69 258869_at AT3G03090 AtVGT1, vacuolar glucose transporter 1, VGT1, vacuolar glucose transporter 1 -0.306 -0.122
70 263558_at AT2G16380 [Sec14p-like phosphatidylinositol transfer family protein] -0.294 -0.112
71 254697_at AT4G17970 ALMT12, aluminum-activated, malate transporter 12, ATALMT12, QUAC1, quick-activating anion channel 1 -0.290 -0.073
72 259398_at AT1G17700 PRA1.F1, prenylated RAB acceptor 1.F1 -0.290 -0.204
73 263809_at AT2G04570 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.279 -0.139
74 253617_at AT4G30410 [sequence-specific DNA binding transcription factors] -0.276 -0.335
75 253040_at AT4G37800 XTH7, xyloglucan endotransglucosylase/hydrolase 7 -0.271 -0.226
76 246502_at AT5G16240 [Plant stearoyl-acyl-carrier-protein desaturase family protein] -0.268 -0.074
77 247377_at AT5G63180 [Pectin lyase-like superfamily protein] -0.264 -0.319
78 253859_at AT4G27657 unknown -0.258 0.789
79 264840_at AT1G03440 [Leucine-rich repeat (LRR) family protein] -0.248 -0.130
80 248888_at AT5G46240 AtKAT1, KAT1, potassium channel in Arabidopsis thaliana 1 -0.243 0.054
81 251330_at AT3G61550 [RING/U-box superfamily protein] -0.239 -0.122
82 265544_at AT2G28260 ATCNGC15, cyclic nucleotide-gated channel 15, CNGC15, cyclic nucleotide-gated channel 15 -0.239 -0.063
83 249278_at AT5G41900 [alpha/beta-Hydrolases superfamily protein] -0.237 -0.179
84 250161_at AT5G15240 [Transmembrane amino acid transporter family protein] -0.234 -0.032
85 267038_at AT2G38480 [Uncharacterised protein family (UPF0497)] -0.234 -0.094
86 254744_at AT4G13345 MEE55, maternal effect embryo arrest 55 -0.233 -0.099
87 261754_at AT1G76130 AMY2, alpha-amylase-like 2, ATAMY2, ARABIDOPSIS THALIANA ALPHA-AMYLASE-LIKE 2 -0.226 -0.061
88 265823_at AT2G35760 [Uncharacterised protein family (UPF0497)] -0.226 -0.069
89 261845_at AT1G15960 ATNRAMP6, NRAMP6, NRAMP metal ion transporter 6 -0.224 -0.130
90 247357_at AT5G63710 [Leucine-rich repeat protein kinase family protein] -0.223 -0.015
91 247255_at AT5G64780 [Uncharacterised conserved protein UCP009193] -0.222 0.116