4.0:Information of module
gun5 control
In comparison with leaf chr11-1chr17-1 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009605 response to external stimulus BP 2.784e-16
GO:0050896 response to stimulus BP 3.219e-13
GO:0006950 response to stress BP 7.045e-13
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0007623 circadian rhythm BP 3.300e-11
GO:0048511 rhythmic process BP 3.300e-11
GO:0044723 single-organism carbohydrate metabolic p... BP 3.017e-09
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
gun5 control		 Log2 signal ratio
leaf chr11-1chr17-1
1 264635_at AT1G65500 unknown 0.546 0.371
2 262369_at AT1G73010 AtPPsPase1, pyrophosphate-specific phosphatase1, ATPS2, phosphate starvation-induced gene 2, PPsPase1, pyrophosphate-specific phosphatase1, PS2, phosphate starvation-induced gene 2 0.490 0.461
3 254832_at AT4G12490 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.484 0.381
4 263391_at AT2G11810 ATMGD3, MGD3, MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 3, MGDC, monogalactosyldiacylglycerol synthase type C 0.365 -0.072
5 255524_at AT4G02330 AtPME41, ATPMEPCRB, PME41, pectin methylesterase 41 0.354 0.352
6 260556_at AT2G43620 [Chitinase family protein] 0.331 0.322
7 254314_at AT4G22470 [protease inhibitor/seed storage/lipid transfer protein (LTP) family protein] 0.331 0.127
8 257264_at AT3G22060 [Receptor-like protein kinase-related family protein] 0.315 -0.066
9 245329_at AT4G14365 XBAT34, XB3 ortholog 4 in Arabidopsis thaliana 0.301 0.159
10 266132_at AT2G45130 ATSPX3, ARABIDOPSIS THALIANA SPX DOMAIN GENE 3, SPX3, SPX domain gene 3 0.293 0.147
11 263800_at AT2G24600 [Ankyrin repeat family protein] 0.286 -0.003
12 263168_at AT1G03020 [Thioredoxin superfamily protein] 0.282 -0.027
13 251054_at AT5G01540 LecRK-VI.2, L-type lectin receptor kinase-VI.2, LECRKA4.1, lectin receptor kinase a4.1 0.282 0.180
14 256096_at AT1G13650 unknown 0.282 0.161
15 259609_at AT1G52410 AtTSA1, TSA1, TSK-associating protein 1 0.278 0.007
16 259925_at AT1G75040 PR-5, PR5, pathogenesis-related gene 5 0.273 0.171
17 263851_at AT2G04460 unknown 0.270 0.204
18 262050_at AT1G80130 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.264 0.645
19 260656_at AT1G19380 unknown 0.262 0.206
20 251072_at AT5G01740 [Nuclear transport factor 2 (NTF2) family protein] 0.246 0.397
21 252170_at AT3G50480 HR4, homolog of RPW8 4 0.243 0.182
22 259329_at AT3G16360 AHP4, HPT phosphotransmitter 4 0.242 0.064
23 249983_at AT5G18470 [Curculin-like (mannose-binding) lectin family protein] 0.237 0.168
24 264616_at AT2G17740 [Cysteine/Histidine-rich C1 domain family protein] 0.233 0.067
25 248327_at AT5G52750 [Heavy metal transport/detoxification superfamily protein ] 0.225 0.359
26 254255_at AT4G23220 CRK14, cysteine-rich RLK (RECEPTOR-like protein kinase) 14 0.221 0.455
27 259432_at AT1G01520 ASG4, ALTERED SEED GERMINATION 4 0.219 0.088
28 252414_at AT3G47420 AtG3Pp1, Glycerol-3-phosphate permease 1, ATPS3, phosphate starvation-induced gene 3, G3Pp1, Glycerol-3-phosphate permease 1, PS3, phosphate starvation-induced gene 3 0.216 0.233
29 260399_at AT1G72520 ATLOX4, Arabidopsis thaliana lipoxygenase 4, LOX4, lipoxygenase 4 0.212 -0.139
30 266766_at AT2G46880 ATPAP14, PAP14, purple acid phosphatase 14 0.209 0.063
31 265917_at AT2G15080 AtRLP19, receptor like protein 19, RLP19, receptor like protein 19 0.206 -0.124
32 246001_at AT5G20790 unknown 0.206 0.186
33 258887_at AT3G05630 PDLZ2, PHOSPHOLIPASE D ZETA 2, PLDP2, phospholipase D P2, PLDZETA2, PHOSPHOLIPASE D ZETA 2 0.205 -0.002
34 256266_at AT3G12320 LNK3, night light-inducible and clock-regulated 3 0.204 0.519
35 265025_at AT1G24575 unknown 0.202 0.162
36 264893_at AT1G23140 [Calcium-dependent lipid-binding (CaLB domain) family protein] 0.199 -0.259
37 249567_at AT5G38020 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.196 -0.046
38 262902_x_at AT1G59930 [MADS-box family protein] 0.195 0.167
39 263120_at AT1G78490 CYP708A3, cytochrome P450, family 708, subfamily A, polypeptide 3 0.192 -0.170
40 255360_at AT4G03960 AtPFA-DSP4, PFA-DSP4, plant and fungi atypical dual-specificity phosphatase 4 0.192 0.181
41 267069_at AT2G41010 ATCAMBP25, calmodulin (CAM)-binding protein of 25 kDa, CAMBP25, calmodulin (CAM)-binding protein of 25 kDa 0.192 0.316
42 258287_at AT3G15990 SULTR3;4, sulfate transporter 3;4 0.190 0.137
43 248686_at AT5G48540 [receptor-like protein kinase-related family protein] 0.184 0.222
44 254805_at AT4G12480 EARLI1, EARLY ARABIDOPSIS ALUMINUM INDUCED 1, pEARLI 1 0.184 0.429
45 258158_at AT3G17790 ATACP5, ATPAP17, PAP17, purple acid phosphatase 17 0.183 0.148
46 267288_at AT2G23680 [Cold acclimation protein WCOR413 family] 0.183 0.108
47 248784_at AT5G47380 unknown 0.181 -0.105
48 249545_at AT5G38030 [MATE efflux family protein] 0.179 0.023
49 249727_at AT5G35490 ATMRU1, ARABIDOPSIS MTO 1 RESPONDING UP 1, MRU1, MTO 1 RESPONDING UP 1 0.178 0.050
50 267411_at AT2G34930 [disease resistance family protein / LRR family protein] 0.177 0.166
51 259640_at AT1G52400 ATBG1, A. THALIANA BETA-GLUCOSIDASE 1, BGL1, BETA-GLUCOSIDASE HOMOLOG 1, BGLU18, beta glucosidase 18 0.173 0.038
52 263443_at AT2G28630 KCS12, 3-ketoacyl-CoA synthase 12 0.170 0.020
53 267083_at AT2G41100 ATCAL4, ARABIDOPSIS THALIANA CALMODULIN LIKE 4, TCH3, TOUCH 3 0.170 0.078
54 249770_at AT5G24110 ATWRKY30, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 30, WRKY30, WRKY DNA-binding protein 30 0.168 0.032
55 248282_at AT5G52900 MAKR6, MEMBRANE-ASSOCIATED KINASE REGULATOR 6 0.167 0.513
56 261576_at AT1G01070 UMAMIT28, Usually multiple acids move in and out Transporters 28 0.164 0.231
57 261191_at AT1G32900 GBSS1, granule bound starch synthase 1 0.163 0.095
58 248073_at AT5G55720 [Pectin lyase-like superfamily protein] 0.162 -0.053
59 261016_at AT1G26560 BGLU40, beta glucosidase 40 0.161 0.041
60 266320_at AT2G46640 TAC1, Tiller Angle Control 1 0.161 0.181
61 258856_at AT3G02040 AtGDPD1, GDPD1, Glycerophosphodiester phosphodiesterase 1, SRG3, senescence-related gene 3 0.160 0.095
62 249732_at AT5G24420 PGL5, 6-phosphogluconolactonase 5 0.159 0.381
63 245302_at AT4G17695 KAN3, KANADI 3 0.157 -0.064
64 246821_at AT5G26920 CBP60G, Cam-binding protein 60-like G 0.156 0.123
65 257254_at AT3G21950 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.156 -0.507
66 266738_at AT2G47010 unknown 0.155 -0.014
67 261212_at AT1G12880 atnudt12, nudix hydrolase homolog 12, NUDT12, nudix hydrolase homolog 12 0.154 -0.004
68 248732_at AT5G48070 ATXTH20, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 20, XTH20, xyloglucan endotransglucosylase/hydrolase 20 0.154 -0.001
69 256874_at AT3G26320 CYP71B36, cytochrome P450, family 71, subfamily B, polypeptide 36 0.154 0.512
70 246071_at AT5G20150 ATSPX1, ARABIDOPSIS THALIANA SPX DOMAIN GENE 1, SPX1, SPX domain gene 1 0.153 0.094
71 247452_at AT5G62430 CDF1, cycling DOF factor 1 0.153 0.044
72 252858_at AT4G39770 TPPH, trehalose-6-phosphate phosphatase H 0.152 -0.413
73 252572_at AT3G45290 ATMLO3, MILDEW RESISTANCE LOCUS O 3, MLO3, MILDEW RESISTANCE LOCUS O 3 0.150 -0.099
74 251372_at AT3G60520 unknown 0.150 0.241
75 254186_at AT4G24010 ATCSLG1, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE G1, CSLG1, cellulose synthase like G1 0.148 -0.038
76 247880_at AT5G57780 P1R1, P1R1 0.148 0.229
77 246523_at AT5G15850 ATCOL1, BBX2, B-box domain protein 2, COL1, CONSTANS-like 1 0.146 0.045
78 266015_at AT2G24190 SDR2, short-chain dehydrogenase/reductase 2 0.146 -0.427
79 254241_at AT4G23190 AT-RLK3, RECEPTOR LIKE PROTEIN KINASE 3, CRK11, cysteine-rich RLK (RECEPTOR-like protein kinase) 11 0.146 0.292
80 250868_at AT5G03860 MLS, malate synthase -0.592 -0.068
81 249850_at AT5G23240 DJC76, DNA J protein C76 -0.427 -0.294
82 265290_at AT2G22590 [UDP-Glycosyltransferase superfamily protein] -0.393 -0.039
83 256060_at AT1G07050 [CCT motif family protein] -0.367 -0.293
84 250648_at AT5G06760 AtLEA4-5, Late Embryogenesis Abundant 4-5, LEA4-5, Late Embryogenesis Abundant 4-5 -0.364 -0.266
85 249174_at AT5G42900 COR27, cold regulated gene 27 -0.321 -0.051
86 266654_at AT2G25890 [Oleosin family protein] -0.319 -0.004
87 252290_at AT3G49140 [Pentatricopeptide repeat (PPR) superfamily protein] -0.286 -0.159
88 248407_at AT5G51500 [Plant invertase/pectin methylesterase inhibitor superfamily] -0.283 -0.026
89 253322_at AT4G33980 unknown -0.247 -0.316
90 251196_at AT3G62950 [Thioredoxin superfamily protein] -0.242 -0.357
91 250230_at AT5G13900 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.241 -0.002
92 250476_at AT5G10140 AGL25, AGAMOUS-like 25, FLC, FLOWERING LOCUS C, FLF, FLOWERING LOCUS F, RSB6, REDUCED STEM BRANCHING 6 -0.231 -0.775
93 247668_at AT5G60100 APRR3, pseudo-response regulator 3, PRR3, pseudo-response regulator 3 -0.221 -0.334
94 246250_at AT4G36880 CP1, cysteine proteinase1, RDL1, RD21A-LIKE PROTEASE1 -0.221 0.008
95 260890_at AT1G29090 [Cysteine proteinases superfamily protein] -0.219 0.014
96 245668_at AT1G28330 AtDRM1, DRM1, DORMANCY-ASSOCIATED PROTEIN 1, DYL1, dormancy-associated protein-like 1 -0.216 0.029
97 248793_at AT5G47240 atnudt8, nudix hydrolase homolog 8, NUDT8, nudix hydrolase homolog 8 -0.208 -0.132
98 256221_at AT1G56300 [Chaperone DnaJ-domain superfamily protein] -0.206 -0.016
99 251919_at AT3G53800 Fes1B, Fes1B -0.203 -0.161
100 259573_at AT1G20390 [gypsy-like retrotransposon family, has a 1.5e-251 P-value blast match to GB:AAD19359 polyprotein (gypsy_Ty3-element) (Sorghum bicolor)] -0.186 -0.101
101 249128_at AT5G43440 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.179 0.095
102 266737_at AT2G47140 AtSDR5, SDR5, short-chain dehydrogenase reductase 5 -0.179 0.083
103 250597_at AT5G07680 ANAC079, Arabidopsis NAC domain containing protein 79, ANAC080, NAC domain containing protein 80, ATNAC4, NAC080, NAC domain containing protein 80, NAC4 -0.178 0.013
104 267461_at AT2G33830 AtDRM2, DRM2, dormancy associated gene 2 -0.177 -0.087
105 251221_at AT3G62550 [Adenine nucleotide alpha hydrolases-like superfamily protein] -0.173 -0.144
106 267307_at AT2G30210 LAC3, laccase 3 -0.170 0.119
107 258939_at AT3G10020 unknown -0.169 -0.128
108 250987_at AT5G02860 [Pentatricopeptide repeat (PPR) superfamily protein] -0.168 -0.095
109 260803_at AT1G78340 ATGSTU22, glutathione S-transferase TAU 22, GSTU22, glutathione S-transferase TAU 22 -0.164 0.078
110 262698_at AT1G75960 [AMP-dependent synthetase and ligase family protein] -0.164 0.159
111 262517_at AT1G17180 ATGSTU25, glutathione S-transferase TAU 25, GSTU25, glutathione S-transferase TAU 25 -0.163 -0.029
112 245319_at AT4G16146 [cAMP-regulated phosphoprotein 19-related protein] -0.159 -0.293
113 250649_at AT5G06690 WCRKC1, WCRKC thioredoxin 1 -0.159 -0.146
114 257832_at AT3G26740 CCL, CCR-like -0.157 -0.004
115 249245_at AT5G42280 [Cysteine/Histidine-rich C1 domain family protein] -0.157 0.202
116 266275_at AT2G29370 [NAD(P)-binding Rossmann-fold superfamily protein] -0.157 0.130
117 263106_at AT2G05160 [CCCH-type zinc fingerfamily protein with RNA-binding domain] -0.155 -0.210
118 264211_at AT1G22770 FB, GI, GIGANTEA -0.153 -0.032
119 250541_at AT5G09520 PELPK2, Pro-Glu-Leu|Ile|Val-Pro-Lys 2 -0.153 0.067
120 265478_at AT2G15890 MEE14, maternal effect embryo arrest 14 -0.153 -0.038
121 264138_at AT1G78950 AtBAS, AtLUP4, BAS, beta-amyrin synthase -0.153 0.105
122 255331_at AT4G04330 AtRbcX1, RbcX1, homologue of cyanobacterial RbcX 1 -0.153 -0.162
123 247867_at AT5G57630 CIPK21, CBL-interacting protein kinase 21, SnRK3.4, SNF1-RELATED PROTEIN KINASE 3.4 -0.149 -0.120
124 250255_at AT5G13730 SIG4, sigma factor 4, SIGD -0.148 -0.178
125 247525_at AT5G61380 APRR1, AtTOC1, TIMING OF CAB EXPRESSION 1, PRR1, PSEUDO-RESPONSE REGULATOR 1, TOC1, TIMING OF CAB EXPRESSION 1 -0.139 -0.132
126 248502_at AT5G50450 [HCP-like superfamily protein with MYND-type zinc finger] -0.136 -0.095
127 267048_at AT2G34200 [RING/FYVE/PHD zinc finger superfamily protein] -0.134 -0.029
128 245546_at AT4G15290 ATCSLB05, ATCSLB5, CELLULOSE SYNTHASE LIKE 5, CSLB05 -0.133 -0.046
129 251334_at AT3G61390 [RING/U-box superfamily protein] -0.132 -0.071
130 264209_at AT1G22740 ATRABG3B, RAB7, RAB75, RABG3B, RAB GTPase homolog G3B -0.130 -0.156
131 259244_at AT3G07650 BBX7, B-box domain protein 7, COL9, CONSTANS-like 9 -0.128 -0.152
132 263437_at AT2G28670 ESB1, ENHANCED SUBERIN 1 -0.128 0.125
133 247216_at AT5G64860 DPE1, disproportionating enzyme -0.128 -0.030
134 261809_at AT1G08340 [Rho GTPase activating protein with PAK-box/P21-Rho-binding domain] -0.125 -0.043
135 245305_at AT4G17215 [Pollen Ole e 1 allergen and extensin family protein] -0.125 -0.031
136 262452_at AT1G11210 unknown -0.124 0.101
137 255315_at AT4G04165 [pseudogene] -0.121 -0.099
138 262505_at AT1G21680 [DPP6 N-terminal domain-like protein] -0.119 -0.041
139 260189_at AT1G67550 URE, urease -0.119 -0.112
140 252468_at AT3G46970 ATPHS2, Arabidopsis thaliana alpha-glucan phosphorylase 2, PHS2, alpha-glucan phosphorylase 2 -0.118 -0.105
141 262406_at AT1G34670 AtMYB93, myb domain protein 93, MYB93, myb domain protein 93 -0.118 0.215
142 252364_at AT3G48450 [RPM1-interacting protein 4 (RIN4) family protein] -0.118 0.119
143 250596_at AT5G07780 AtFH19, FH19, formin homolog 19 -0.118 -0.045
144 246195_at AT4G36410 UBC17, ubiquitin-conjugating enzyme 17 -0.118 -0.026
145 249472_at AT5G39210 CRR7, CHLORORESPIRATORY REDUCTION 7 -0.117 -0.121
146 252586_at AT3G45610 DOF6, DOF transcription factor 6 -0.116 -0.066
147 255893_at AT1G17960 [Threonyl-tRNA synthetase] -0.115 0.039
148 252924_at AT4G39070 BBX20, B-box domain protein 20, BZS1, BZS1 -0.114 -0.138
149 251494_at AT3G59350 [Protein kinase superfamily protein] -0.114 -0.143
150 253971_at AT4G26530 AtFBA5, FBA5, fructose-bisphosphate aldolase 5 -0.113 -0.092
151 253527_at AT4G31470 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.113 -0.031
152 262309_at AT1G70820 [phosphoglucomutase, putative / glucose phosphomutase, putative] -0.113 -0.117
153 250265_at AT5G12900 unknown -0.112 -0.028
154 256281_at AT3G12560 ATTBP2, TELOMERIC DNA-BINDING PROTEIN 2, TRFL9, TRF-like 9 -0.112 -0.157
155 260989_at AT1G53450 unknown -0.112 0.007
156 249718_at AT5G35740 [Carbohydrate-binding X8 domain superfamily protein] -0.111 -0.026
157 245037_at AT2G26420 PIP5K3, 1-phosphatidylinositol-4-phosphate 5-kinase 3 -0.111 0.029