4.0:Information of module
GR-bdl DEX IAA
In comparison with Col-0 Mock Shade help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0033993 response to lipid BP 1.428e-06
GO:0097305 response to alcohol BP 4.748e-06
GO:0009737 response to abscisic acid BP 2.177e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009733 response to auxin BP 1.563e-23
GO:0009719 response to endogenous stimulus BP 4.257e-21
GO:0009725 response to hormone BP 7.700e-19
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
GR-bdl DEX IAA		 Log2 signal ratio
Col-0 Mock Shade
1 251977_at AT3G53250 SAUR57, SMALL AUXIN UPREGULATED RNA 57 0.415 -0.594
2 249035_at AT5G44190 ATGLK2, GLK2, GOLDEN2-like 2, GPRI2, GBF'S PRO-RICH REGION-INTERACTING FACTOR 2 0.277 -0.741
3 258437_at AT3G16560 [Protein phosphatase 2C family protein] 0.213 0.236
4 263963_at AT2G36080 ABS2, ABNORMAL SHOOT 2, NGAL1, NGATHA-Like 1 0.181 0.084
5 257294_at AT3G15570 [Phototropic-responsive NPH3 family protein] 0.179 0.198
6 248153_at AT5G54250 ATCNGC4, cyclic nucleotide-gated cation channel 4, CNGC4, cyclic nucleotide-gated cation channel 4, DND2, DEFENSE, NO DEATH 2, HLM1 0.176 -0.151
7 250872_at AT5G03960 IQD12, IQ-domain 12 0.175 -0.551
8 264240_at AT1G54820 [Protein kinase superfamily protein] 0.171 -0.358
9 256060_at AT1G07050 [CCT motif family protein] 0.166 -1.401
10 254520_at AT4G19960 ATKUP9, HAK9, KT9, KUP9, K+ uptake permease 9 0.163 -0.321
11 262811_at AT1G11700 unknown 0.159 -0.752
12 251169_at AT3G63210 MARD1, MEDIATOR OF ABA-REGULATED DORMANCY 1 0.159 -0.120
13 253317_at AT4G33960 unknown 0.147 -0.247
14 264470_at AT1G67110 CYP735A2, cytochrome P450, family 735, subfamily A, polypeptide 2 0.143 0.329
15 264636_at AT1G65490 unknown 0.141 -0.318
16 245304_at AT4G15630 [Uncharacterised protein family (UPF0497)] 0.136 -0.351
17 252607_at AT3G44990 AtXTH31, ATXTR8, XTH31, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31, XTR8, xyloglucan endo-transglycosylase-related 8 0.126 -0.220
18 263915_at AT2G36430 unknown 0.119 -0.216
19 248908_at AT5G45800 MEE62, maternal effect embryo arrest 62 0.118 -0.218
20 248140_at AT5G54980 [Uncharacterised protein family (UPF0497)] 0.112 -0.315
21 259308_at AT3G05180 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.111 -0.637
22 265418_at AT2G20880 AtERF53, ERF53, ERF domain 53 0.111 -1.452
23 258156_at AT3G18050 unknown 0.109 -0.173
24 267305_at AT2G30070 ATKT1, potassium transporter 1, ATKT1P, ATKUP1, KT1, potassium transporter 1, KUP1, POTASSIUM UPTAKE TRANSPORTER 1 0.109 -0.071
25 246002_at AT5G20740 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.108 0.435
26 254670_at AT4G18390 TCP2, TCP2, TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 0.107 -0.296
27 247406_at AT5G62920 ARR6, response regulator 6 0.106 0.867
28 250669_at AT5G06870 ATPGIP2, ARABIDOPSIS POLYGALACTURONASE INHIBITING PROTEIN 2, PGIP2, polygalacturonase inhibiting protein 2 0.106 0.336
29 246756_at AT5G27930 [Protein phosphatase 2C family protein] 0.105 -0.061
30 259863_at AT1G72630 ELF4-L2, ELF4-like 2 0.100 -0.121
31 264865_at AT1G24120 ARL1, ARG1-like 1 0.099 -0.061
32 263433_at AT2G22240 ATIPS2, INOSITOL 3-PHOSPHATE SYNTHASE 2, ATMIPS2, MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2, MIPS2, myo-inositol-1-phosphate synthase 2 0.099 0.079
33 246971_at AT5G24940 [Protein phosphatase 2C family protein] 0.098 -0.221
34 258959_at AT3G10600 CAT7, cationic amino acid transporter 7 0.098 -0.025
35 264115_at AT2G31290 [Ubiquitin carboxyl-terminal hydrolase family protein] 0.097 0.367
36 256332_at AT1G76890 AT-GT2, GT2 0.096 0.091
37 258901_at AT3G05640 [Protein phosphatase 2C family protein] 0.096 0.548
38 254777_at AT4G12960 AtGILT, GILT, gamma-interferon-responsive lysosomal thiol reductase 0.095 -1.146
39 250806_at AT5G05070 [DHHC-type zinc finger family protein] 0.094 -0.221
40 266572_at AT2G23840 [HNH endonuclease] 0.094 -0.668
41 262718_at AT1G43570 unknown 0.094 -0.221
42 245244_at AT1G44350 ILL6, IAA-leucine resistant (ILR)-like gene 6 0.093 0.765
43 259476_at AT1G19000 [Homeodomain-like superfamily protein] 0.093 0.067
44 261401_at AT1G79640 [Protein kinase superfamily protein] 0.092 0.049
45 258323_at AT3G22750 [Protein kinase superfamily protein] 0.091 0.090
46 256813_at AT3G21360 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.090 0.188
47 252950_at AT4G38690 [PLC-like phosphodiesterases superfamily protein] 0.090 0.129
48 259541_at AT1G20650 ASG5, ALTERED SEED GERMINATION 5 0.089 -0.172
49 259989_at AT1G41750 unknown 0.089 -0.221
50 266086_at AT2G38060 PHT4;2, phosphate transporter 4;2 0.089 0.781
51 249530_at AT5G38750 [asparaginyl-tRNA synthetase family] 0.088 1.111
52 246952_at AT5G04820 ATOFP13, ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 13, OFP13, ovate family protein 13 0.088 0.131
53 261056_at AT1G01360 PYL9, PYRABACTIN RESISTANCE 1-LIKE 9, RCAR1, regulatory component of ABA receptor 1 0.088 -0.220
54 248623_at AT5G49170 unknown 0.087 0.229
55 267426_at AT2G34820 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.086 -0.221
56 266313_at AT2G26980 CIPK3, CBL-interacting protein kinase 3, SnRK3.17, SNF1-RELATED PROTEIN KINASE 3.17 0.083 0.353
57 257260_at AT3G22104 [Phototropic-responsive NPH3 family protein] 0.082 -0.422
58 265354_at AT2G16700 ADF5, actin depolymerizing factor 5, ATADF5 0.081 0.226
59 251519_at AT3G59400 GUN4, GENOMES UNCOUPLED 4 0.081 0.096
60 255506_at AT4G02130 GATL6, galacturonosyltransferase-like 6, LGT10 0.081 0.363
61 255193_at AT4G07400 VFB3, VIER F-box proteine 3 0.081 0.285
62 261766_at AT1G15580 ATAUX2-27, AUX2-27, AUXIN-INDUCIBLE 2-27, IAA5, indole-3-acetic acid inducible 5 -0.888 2.137
63 259785_at AT1G29490 SAUR68, SMALL AUXIN UPREGULATED 68 -0.869 2.031
64 265806_at AT2G18010 SAUR10, SMALL AUXIN UPREGULATED RNA 10 -0.801 1.513
65 254685_at AT4G13790 SAUR25, SMALL AUXIN UPREGULATED RNA 25 -0.773 -0.221
66 257506_at AT1G29440 SAUR63, SMALL AUXIN UP RNA 63 -0.757 1.279
67 266830_at AT2G22810 ACC4, 1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID SYNTHASE POLYPEPTIDE, ACS4, 1-aminocyclopropane-1-carboxylate synthase 4, ATACS4 -0.721 0.932
68 259773_at AT1G29500 SAUR66, SMALL AUXIN UPREGULATED RNA 66 -0.684 1.075
69 247252_at AT5G64770 CLEL 9, CLE-like 9, GLV2, GOLVEN 2, RGF9, root meristem growth factor 9 -0.678 -0.180
70 266611_at AT2G14960 GH3.1 -0.659 0.144
71 256743_at AT3G29370 P1R3, P1R3 -0.571 1.303
72 260152_at AT1G52830 IAA6, indole-3-acetic acid 6, SHY1, SHORT HYPOCOTYL 1 -0.562 1.246
73 253423_at AT4G32280 IAA29, indole-3-acetic acid inducible 29 -0.550 2.245
74 250509_at AT5G09970 CYP78A7, cytochrome P450, family 78, subfamily A, polypeptide 7 -0.537 1.164
75 254065_at AT4G25420 AT2301, ATGA20OX1, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 1, GA20OX1, GA5, GA REQUIRING 5 -0.529 0.952
76 257900_at AT3G28420 [Putative membrane lipoprotein] -0.527 1.000
77 248282_at AT5G52900 MAKR6, MEMBRANE-ASSOCIATED KINASE REGULATOR 6 -0.524 1.024
78 245397_at AT4G14560 AXR5, AUXIN RESISTANT 5, IAA1, indole-3-acetic acid inducible 1 -0.523 1.093
79 259787_at AT1G29460 SAUR65, SMALL AUXIN UPREGULATED RNA 65 -0.517 1.221
80 259783_at AT1G29510 SAUR67, SMALL AUXIN UPREGULATED RNA 67 -0.502 1.134
81 259331_at AT3G03840 SAUR27, SMALL AUXIN UP RNA 27 -0.499 1.036
82 266974_at AT2G39370 MAKR4, MEMBRANE-ASSOCIATED KINASE REGULATOR 4 -0.482 -0.352
83 263890_at AT2G37030 SAUR46, SMALL AUXIN UPREGULATED RNA 46 -0.467 -0.127
84 253485_at AT4G31800 ATWRKY18, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 18, WRKY18, WRKY DNA-binding protein 18 -0.458 1.089
85 253066_at AT4G37770 ACS8, 1-amino-cyclopropane-1-carboxylate synthase 8 -0.411 2.393
86 249306_at AT5G41400 [RING/U-box superfamily protein] -0.408 0.382
87 247159_at AT5G65800 ACS5, ACC synthase 5, ATACS5, CIN5, CYTOKININ-INSENSITIVE 5, ETO2, ETHYLENE OVERPRODUCER 2 -0.408 1.449
88 250327_at AT5G12050 unknown -0.400 2.219
89 259784_at AT1G29450 SAUR64, SMALL AUXIN UPREGULATED RNA 64 -0.400 1.519
90 250155_at AT5G15160 BHLH134, BASIC HELIX-LOOP-HELIX PROTEIN 134, BNQ2, BANQUO 2 -0.399 -0.202
91 255856_at AT1G66940 [protein kinase-related] -0.397 0.303
92 259373_at AT1G69160 unknown -0.391 -0.079
93 252970_at AT4G38850 ATSAUR15, ARABIDOPSIS THALIANA SMALL AUXIN UPREGULATED 15, SAUR-AC1, ARABIDOPSIS COLUMBIA SAUR GENE 1, SAUR15, SMALL AUXIN UPREGULATED 15, SAUR_AC1, SMALL AUXIN UP RNA 1 FROM ARABIDOPSIS THALIANA ECOTYPE COLUMBIA -0.388 0.785
94 250012_x_at AT5G18060 SAUR23, SMALL AUXIN UP RNA 23 -0.387 1.448
95 261917_at AT1G65920 [Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain] -0.373 0.174
96 257642_at AT3G25710 ATAIG1, BHLH32, basic helix-loop-helix 32, TMO5, TARGET OF MONOPTEROS 5 -0.372 0.240
97 248371_at AT5G51810 AT2353, ATGA20OX2, GA20OX2, gibberellin 20 oxidase 2 -0.368 0.898
98 251017_at AT5G02760 APD7, Arabidopsis Pp2c clade D 7 -0.366 1.432
99 252972_at AT4G38840 SAUR14, SMALL AUXIN UPREGULATED RNA 14 -0.356 0.230
100 257026_at AT3G19200 unknown -0.354 1.039
101 267614_at AT2G26710 BAS1, PHYB ACTIVATION TAGGED SUPPRESSOR 1, CYP72B1, CYP734A1 -0.353 1.337
102 248104_at AT5G55250 AtIAMT1, IAMT1, IAA carboxylmethyltransferase 1 -0.349 0.341
103 246494_at AT5G16190 ATCSLA11, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE A11, CSLA11, cellulose synthase like A11 -0.339 0.212
104 258907_at AT3G06370 ATNHX4, NHX4, sodium hydrogen exchanger 4 -0.333 0.324
105 259845_at AT1G73590 ATPIN1, ARABIDOPSIS THALIANA PIN-FORMED 1, PIN1, PIN-FORMED 1 -0.332 0.055
106 245947_at AT5G19530 ACL5, ACAULIS 5 -0.330 0.286
107 258399_at AT3G15540 IAA19, indole-3-acetic acid inducible 19, MSG2, MASSUGU 2 -0.327 1.375
108 260143_at AT1G71880 ATSUC1, ARABIDOPSIS THALIANA SUCROSE-PROTON SYMPORTER 1, SUC1, sucrose-proton symporter 1 -0.326 0.001
109 265856_at AT2G42430 ASL18, ASYMMETRIC LEAVES2-LIKE 18, LBD16, lateral organ boundaries-domain 16 -0.325 0.221
110 262263_at AT1G70940 ATPIN3, ARABIDOPSIS PIN-FORMED 3, PIN3, PIN-FORMED 3 -0.323 0.885
111 247474_at AT5G62280 unknown -0.310 1.309
112 245696_at AT5G04190 PKS4, phytochrome kinase substrate 4 -0.310 0.700
113 246798_at AT5G26930 GATA23, GATA transcription factor 23 -0.305 -0.221
114 255788_at AT2G33310 IAA13, auxin-induced protein 13 -0.298 0.237
115 245076_at AT2G23170 GH3.3 -0.297 1.025
116 248801_at AT5G47370 HAT2 -0.294 1.971
117 260264_at AT1G68500 unknown -0.293 0.024
118 260494_at AT2G41820 PXC3, PXY/TDR-correlated 3 -0.292 0.193
119 266832_at AT2G30040 MAPKKK14, mitogen-activated protein kinase kinase kinase 14 -0.292 0.121
120 245052_at AT2G26440 PME12, pectin methylesterase 12 -0.292 0.362
121 266831_at AT2G22830 SQE2, squalene epoxidase 2 -0.280 0.383