4.0:Information of module
wt systemic wounding
In comparison with root endodermis and quiescent center 40 mM NaCl help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0015711 organic anion transport BP 5.504e-17
GO:0009753 response to jasmonic acid BP 3.345e-16
GO:0006865 amino acid transport BP 3.686e-16
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009086 methionine biosynthetic process BP 1.150e-07
GO:0006555 methionine metabolic process BP 1.368e-07
GO:0000394 RNA splicing, via endonucleolytic cleava... BP 1.147e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
wt systemic wounding		 Log2 signal ratio
root endodermis and quiescent center 40 mM NaCl
1 263210_at AT1G10585 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 1.142 0.030
2 264511_at AT1G09350 AtGolS3, galactinol synthase 3, GolS3, galactinol synthase 3 1.023 0.039
3 257644_at AT3G25780 AOC3, allene oxide cyclase 3 0.873 -0.021
4 266271_at AT2G29440 ATGSTU6, glutathione S-transferase tau 6, GST24, GLUTATHIONE S-TRANSFERASE 24, GSTU6, glutathione S-transferase tau 6 0.709 0.116
5 262756_at AT1G16370 ATOCT6, ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER 6, OCT6, organic cation/carnitine transporter 6 0.704 -0.110
6 257919_at AT3G23250 ATMYB15, MYB DOMAIN PROTEIN 15, ATY19, MYB15, myb domain protein 15 0.691 0.051
7 254085_at AT4G24960 ATHVA22D, ARABIDOPSIS THALIANA HVA22 HOMOLOGUE D, HVA22D, HVA22 homologue D 0.680 0.258
8 250680_at AT5G06570 [alpha/beta-Hydrolases superfamily protein] 0.672 -0.063
9 251895_at AT3G54420 ATCHITIV, CHITINASE CLASS IV, ATEP3, homolog of carrot EP3-3 chitinase, CHIV, EP3, homolog of carrot EP3-3 chitinase 0.671 0.366
10 259445_at AT1G02400 ATGA2OX4, Arabidopsis thaliana gibberellin 2-oxidase 4, ATGA2OX6, ARABIDOPSIS THALIANA GIBBERELLIN 2-OXIDASE 6, DTA1, DOWNSTREAM TARGET OF AGL15 1, GA2OX6, gibberellin 2-oxidase 6 0.656 0.257
11 266800_at AT2G22880 [VQ motif-containing protein] 0.629 0.192
12 252102_at AT3G50970 LTI30, LOW TEMPERATURE-INDUCED 30, XERO2 0.625 0.208
13 253104_at AT4G36010 [Pathogenesis-related thaumatin superfamily protein] 0.615 0.210
14 247175_at AT5G65280 GCL1, GCR2-like 1 0.588 0.010
15 266901_at AT2G34600 JAZ7, jasmonate-zim-domain protein 7, TIFY5B 0.585 -0.501
16 258941_at AT3G09940 ATMDAR3, ARABIDOPSIS THALIANA MONODEHYDROASCORBATE REDUCTASE 3, MDAR2, MONODEHYDROASCORBATE REDUCTASE 2, MDAR3, MONODEHYDROASCORBATE REDUCTASE 3, MDHAR, monodehydroascorbate reductase 0.584 -0.262
17 266267_at AT2G29460 ATGSTU4, glutathione S-transferase tau 4, GST22, GLUTATHIONE S-TRANSFERASE 22, GSTU4, glutathione S-transferase tau 4 0.582 0.407
18 260438_at AT1G68290 ENDO2, endonuclease 2 0.582 0.242
19 246911_at AT5G25810 tny, TINY 0.560 -0.114
20 252437_at AT3G47380 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.554 0.090
21 246432_at AT5G17490 AtRGL3, RGL3, RGA-like protein 3 0.550 0.043
22 260264_at AT1G68500 unknown 0.548 0.642
23 257835_at AT3G25180 CYP82G1, cytochrome P450, family 82, subfamily G, polypeptide 1 0.538 0.070
24 251513_at AT3G59220 ATPIRIN1, PRN, pirin, PRN1 0.505 0.215
25 245253_at AT4G15440 CYP74B2, HPL1, hydroperoxide lyase 1 0.500 -0.039
26 266989_at AT2G39330 JAL23, jacalin-related lectin 23 0.499 0.048
27 262496_at AT1G21790 [TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein] 0.489 0.220
28 258252_at AT3G15720 [Pectin lyase-like superfamily protein] 0.487 -0.034
29 256833_at AT3G22910 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] 0.475 0.369
30 263539_at AT2G24850 TAT, TYROSINE AMINOTRANSFERASE, TAT3, tyrosine aminotransferase 3 0.470 -0.105
31 258719_at AT3G09540 [Pectin lyase-like superfamily protein] 0.466 -0.053
32 255795_at AT2G33380 AtCLO3, Arabidopsis thaliana caleosin 3, CLO-3, caleosin 3, CLO3, caleosin 3, RD20, RESPONSIVE TO DESSICATION 20 0.461 0.086
33 265853_at AT2G42360 [RING/U-box superfamily protein] 0.458 0.118
34 247704_at AT5G59510 DVL18, DEVIL 18, RTFL5, ROTUNDIFOLIA like 5 0.456 0.246
35 248100_at AT5G55180 [O-Glycosyl hydrolases family 17 protein] 0.454 0.194
36 253628_at AT4G30280 ATXTH18, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18, XTH18, xyloglucan endotransglucosylase/hydrolase 18 0.447 -0.101
37 262254_at AT1G53920 GLIP5, GDSL-motif lipase 5 0.439 -0.022
38 266992_at AT2G39200 ATMLO12, MILDEW RESISTANCE LOCUS O 12, MLO12, MILDEW RESISTANCE LOCUS O 12 0.439 0.416
39 247464_at AT5G62070 IQD23, IQ-domain 23 0.429 0.045
40 266799_at AT2G22860 ATPSK2, phytosulfokine 2 precursor, PSK2, phytosulfokine 2 precursor 0.428 0.103
41 250598_at AT5G07690 ATMYB29, myb domain protein 29, MYB29, myb domain protein 29, PMG2, PRODUCTION OF METHIONINE-DERIVED GLUCOSINOLATE 2 0.423 0.003
42 260399_at AT1G72520 ATLOX4, Arabidopsis thaliana lipoxygenase 4, LOX4, lipoxygenase 4 0.419 -0.147
43 260386_at AT1G74010 [Calcium-dependent phosphotriesterase superfamily protein] 0.410 0.214
44 261318_at AT1G53035 unknown 0.405 0.178
45 256324_at AT1G66760 [MATE efflux family protein] 0.403 0.239
46 261899_at AT1G80820 ATCCR2, CCR2, cinnamoyl coa reductase 0.396 0.045
47 249411_at AT5G40390 RS5, raffinose synthase 5, SIP1, seed imbibition 1-like 0.395 0.188
48 263443_at AT2G28630 KCS12, 3-ketoacyl-CoA synthase 12 -0.387 0.016
49 265837_at AT2G14560 LURP1, LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA -0.364 0.019
50 263182_at AT1G05575 unknown -0.352 0.038
51 250265_at AT5G12900 unknown -0.352 -0.108
52 254954_at AT4G10910 unknown -0.335 0.042
53 257624_at AT3G26220 CYP71B3, cytochrome P450, family 71, subfamily B, polypeptide 3 -0.326 0.023
54 255654_at AT4G00970 CRK41, cysteine-rich RLK (RECEPTOR-like protein kinase) 41 -0.319 -0.016
55 254256_at AT4G23180 CRK10, cysteine-rich RLK (RECEPTOR-like protein kinase) 10, RLK4 -0.318 0.054
56 260206_at AT1G70740 [Protein kinase superfamily protein] -0.311 -0.083
57 259010_at AT3G07340 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.306 0.019
58 257623_at AT3G26210 CYP71B23, cytochrome P450, family 71, subfamily B, polypeptide 23 -0.300 0.051
59 255438_at AT4G03070 AOP, AOP1, AOP1.1 -0.290 -0.097
60 265573_at AT2G28200 [C2H2-type zinc finger family protein] -0.289 -0.254
61 252501_at AT3G46880 unknown -0.277 0.093
62 257900_at AT3G28420 [Putative membrane lipoprotein] -0.266 -0.046
63 264507_at AT1G09415 NIMIN-3, NIM1-interacting 3 -0.265 0.014
64 250975_at AT5G03050 unknown -0.260 0.086
65 263318_at AT2G24762 AtGDU4, glutamine dumper 4, GDU4, glutamine dumper 4 -0.257 0.019
66 265189_at AT1G23840 unknown -0.256 -0.026
67 257848_at AT3G13030 [hAT transposon superfamily protein] -0.251 -0.288
68 255957_at AT1G22160 unknown -0.251 0.278
69 265869_at AT2G01760 ARR14, response regulator 14, RR14, response regulator 14 -0.243 -0.004
70 248420_at AT5G51560 [Leucine-rich repeat protein kinase family protein] -0.242 -0.039
71 263485_at AT2G29890 ATVLN1, VLN1, villin 1 -0.237 -0.164
72 250720_at AT5G06180 unknown -0.236 -0.037
73 249944_at AT5G22290 anac089, NAC domain containing protein 89, FSQ6, fructose-sensing quantitative trait locus 6, NAC089, NAC domain containing protein 89 -0.233 0.239
74 249727_at AT5G35490 ATMRU1, ARABIDOPSIS MTO 1 RESPONDING UP 1, MRU1, MTO 1 RESPONDING UP 1 -0.217 0.012
75 258935_at AT3G10120 unknown -0.210 -0.039
76 251278_at AT3G61780 emb1703, embryo defective 1703 -0.204 -0.087
77 252612_at AT3G45160 [Putative membrane lipoprotein] -0.201 -0.202
78 249221_at AT5G42440 [Protein kinase superfamily protein] -0.200 0.096
79 250031_at AT5G18240 ATMYR1, ARABIDOPSIS MYB-RELATED PROTEIN 1, MYR1, myb-related protein 1 -0.194 0.020
80 250751_at AT5G05890 [UDP-Glycosyltransferase superfamily protein] -0.189 -0.132
81 250823_at AT5G05180 unknown -0.187 -0.292
82 249550_at AT5G38210 [Protein kinase family protein] -0.186 -0.026
83 253980_at AT4G26620 [Sucrase/ferredoxin-like family protein] -0.182 0.029
84 265873_at AT2G01630 [O-Glycosyl hydrolases family 17 protein] -0.169 0.018
85 266929_at AT2G45850 AHL9, AT-hook motif nuclear localized protein 9 -0.169 -0.024
86 249216_at AT5G42240 scpl42, serine carboxypeptidase-like 42 -0.164 -0.031
87 255487_at AT4G02610 [Aldolase-type TIM barrel family protein] -0.161 -0.121
88 249470_at AT5G39350 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.161 -0.033
89 256706_at AT3G30300 [O-fucosyltransferase family protein] -0.159 0.002
90 245947_at AT5G19530 ACL5, ACAULIS 5 -0.159 -0.311
91 253185_at AT4G35240 unknown -0.158 0.075
92 245074_at AT2G23200 [Protein kinase superfamily protein] -0.155 0.045
93 264361_at AT1G03300 unknown -0.148 -0.060