4.0:Information of module
GV3101 3hpi
In comparison with rGRF help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0035556 intracellular signal transduction BP 1.731e-06
GO:0009814 defense response, incompatible interacti... BP 3.290e-06
GO:0009617 response to bacterium BP 3.508e-06
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009813 flavonoid biosynthetic process BP 7.625e-21
GO:0009812 flavonoid metabolic process BP 1.623e-18
GO:0010224 response to UV-B BP 1.154e-17
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
GV3101 3hpi		 Log2 signal ratio
rGRF
1 267262_at AT2G22990 SCPL8, SERINE CARBOXYPEPTIDASE-LIKE 8, SNG1, sinapoylglucose 1 0.501 0.021
2 260783_at AT1G06160 ORA59, octadecanoid-responsive Arabidopsis AP2/ERF 59 0.495 0.272
3 251246_at AT3G62100 IAA30, indole-3-acetic acid inducible 30 0.409 0.071
4 253046_at AT4G37370 CYP81D8, cytochrome P450, family 81, subfamily D, polypeptide 8 0.392 0.235
5 261021_at AT1G26380 [FAD-binding Berberine family protein] 0.329 0.220
6 249928_at AT5G22250 AtCAF1b, CCR4- associated factor 1b, CAF1b, CCR4- associated factor 1b 0.287 -0.002
7 246596_at AT5G14740 BETA CA2, BETA CARBONIC ANHYDRASE 2, CA18, CARBONIC ANHYDRASE 18, CA2, carbonic anhydrase 2 0.241 -0.006
8 254093_at AT4G25110 AtMC2, metacaspase 2, AtMCP1c, metacaspase 1c, MC2, metacaspase 2, MCP1c, metacaspase 1c 0.234 0.031
9 262870_at AT1G64710 [GroES-like zinc-binding dehydrogenase family protein] 0.227 0.066
10 252092_at AT3G51420 ATSSL4, STRICTOSIDINE SYNTHASE-LIKE 4, SSL4, strictosidine synthase-like 4 0.220 -0.031
11 260754_at AT1G49000 unknown 0.213 0.203
12 247205_at AT5G64890 PROPEP2, elicitor peptide 2 precursor 0.208 0.002
13 246293_at AT3G56710 SIB1, sigma factor binding protein 1 0.201 0.134
14 262793_at AT1G13110 CYP71B7, cytochrome P450, family 71 subfamily B, polypeptide 7 0.200 0.189
15 262315_at AT1G70990 [proline-rich family protein] 0.182 0.044
16 254015_at AT4G26140 BGAL12, beta-galactosidase 12 0.180 0.069
17 261292_at AT1G36940 unknown 0.178 0.018
18 257153_at AT3G27220 [Galactose oxidase/kelch repeat superfamily protein] 0.169 0.047
19 263652_at AT1G04330 unknown 0.168 0.071
20 251919_at AT3G53800 Fes1B, Fes1B 0.156 0.156
21 259211_at AT3G09020 [alpha 1,4-glycosyltransferase family protein] 0.151 0.021
22 251320_at AT3G61530 PANB2 0.149 0.006
23 247278_at AT5G64380 [Inositol monophosphatase family protein] 0.140 0.008
24 249327_at AT5G40890 ATCLC-A, chloride channel A, ATCLCA, CLC-A, chloride channel A, CLC-A, CHLORIDE CHANNEL-A, CLCA, CHLORIDE CHANNEL A 0.138 0.032
25 262288_at AT1G70760 CRR23, CHLORORESPIRATORY REDUCTION 23, NdhL, NADH dehydrogenase-like complex L 0.132 -0.024
26 262552_at AT1G31350 KUF1, KAR-UP F-box 1 0.129 0.055
27 252441_at AT3G46780 PTAC16, plastid transcriptionally active 16 0.121 -0.040
28 246019_at AT5G10690 [pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein] 0.119 -0.020
29 263565_at AT2G15390 atfut4, FUT4, fucosyltransferase 4 0.118 0.027
30 254256_at AT4G23180 CRK10, cysteine-rich RLK (RECEPTOR-like protein kinase) 10, RLK4 0.116 0.135
31 250498_at AT5G09660 PMDH2, peroxisomal NAD-malate dehydrogenase 2 0.115 -0.025
32 250948_at AT5G03490 [UDP-Glycosyltransferase superfamily protein] 0.114 -0.011
33 252387_at AT3G47800 [Galactose mutarotase-like superfamily protein] 0.113 0.090
34 266860_at AT2G26870 NPC2, non-specific phospholipase C2 0.112 0.027
35 256262_at AT3G12150 unknown 0.108 0.028
36 253065_at AT4G37740 AtGRF2, growth-regulating factor 2, GRF2, growth-regulating factor 2 0.107 0.010
37 260206_at AT1G70740 [Protein kinase superfamily protein] 0.107 0.013
38 259499_at AT1G15730 [Cobalamin biosynthesis CobW-like protein] 0.107 -0.050
39 246028_at AT5G21170 5'-AMP-activated protein kinase beta-2 subunit protein 0.103 0.100
40 261084_at AT1G07440 [NAD(P)-binding Rossmann-fold superfamily protein] 0.102 0.047
41 259484_at AT1G12580 PEPKR1, phosphoenolpyruvate carboxylase-related kinase 1 0.099 -0.008
42 253750_at AT4G29000 [Tesmin/TSO1-like CXC domain-containing protein] 0.098 0.012
43 267490_at AT2G19130 [S-locus lectin protein kinase family protein] 0.093 0.091
44 256975_at AT3G21000 [Gag-Pol-related retrotransposon family protein] 0.093 0.027
45 255617_at AT4G01330 [Protein kinase superfamily protein] 0.091 0.111
46 246906_at AT5G25475 [AP2/B3-like transcriptional factor family protein] 0.091 0.021
47 251914_at AT3G53930 [Protein kinase superfamily protein] 0.089 -0.059
48 260733_at AT1G17640 [RNA-binding (RRM/RBD/RNP motifs) family protein] 0.089 -0.058
49 259694_at AT1G63180 UGE3, UDP-D-glucose/UDP-D-galactose 4-epimerase 3 0.088 0.032
50 248788_at AT5G47430 [DWNN domain, a CCHC-type zinc finger] 0.087 -0.040
51 248302_at AT5G53160 PYL8, PYR1-like 8, RCAR3, regulatory components of ABA receptor 3 0.080 0.033
52 267562_at AT2G39670 [Radical SAM superfamily protein] 0.080 -0.004
53 256577_at AT3G28220 [TRAF-like family protein] -0.820 0.077
54 255795_at AT2G33380 AtCLO3, Arabidopsis thaliana caleosin 3, CLO-3, caleosin 3, CLO3, caleosin 3, RD20, RESPONSIVE TO DESSICATION 20 -0.612 0.045
55 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN -0.576 -0.277
56 259802_at AT1G72260 THI2.1, thionin 2.1, THI2.1.1 -0.534 0.335
57 252123_at AT3G51240 F3'H, F3H, flavanone 3-hydroxylase, TT6, TRANSPARENT TESTA 6 -0.530 -0.064
58 266743_at AT2G02990 ATRNS1, RIBONUCLEASE 1, RNS1, ribonuclease 1 -0.522 0.064
59 266883_at AT2G44810 DAD1, DEFECTIVE ANTHER DEHISCENCE 1 -0.506 0.052
60 251513_at AT3G59220 ATPIRIN1, PRN, pirin, PRN1 -0.505 0.051
61 256933_at AT3G22600 LTPG5, glycosylphosphatidylinositol-anchored lipid protein transfer 5 -0.479 0.130
62 250794_at AT5G05270 AtCHIL, CHIL, chalcone isomerase like -0.419 -0.096
63 246272_at AT4G37150 ATMES9, ARABIDOPSIS THALIANA METHYL ESTERASE 9, MES9, methyl esterase 9 -0.415 0.019
64 259878_at AT1G76790 IGMT5, indole glucosinolate O-methyltransferase 5 -0.413 0.164
65 250558_at AT5G07990 CYP75B1, CYTOCHROME P450 75B1, D501, TT7, TRANSPARENT TESTA 7 -0.408 -0.092
66 255056_at AT4G09820 AtTT8, BHLH42, TT8, TRANSPARENT TESTA 8 -0.403 -0.143
67 250207_at AT5G13930 ATCHS, CHS, CHALCONE SYNTHASE, TT4, TRANSPARENT TESTA 4 -0.402 -0.105
68 244970_at ATCG00660 RPL20, ribosomal protein L20 -0.397 -0.017
69 264271_at AT1G60270 BGLU6, beta glucosidase 6 -0.375 -0.060
70 250420_at AT5G11260 HY5, ELONGATED HYPOCOTYL 5, TED 5, REVERSAL OF THE DET PHENOTYPE 5 -0.372 -0.160
71 246966_at AT5G24850 CRY3, cryptochrome 3 -0.369 -0.143
72 248185_at AT5G54060 UF3GT, UDP-glucose:flavonoid 3-o-glucosyltransferase, UGT79B1, UDP-glucosyl transferase 79B1 -0.368 -0.053
73 261907_at AT1G65060 4CL3, 4-coumarate:CoA ligase 3 -0.368 -0.171
74 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 -0.364 -0.030
75 256924_at AT3G29590 AT5MAT -0.363 -0.071
76 252073_at AT3G51750 unknown -0.358 -0.072
77 249063_at AT5G44110 ABCI21, ATP-binding cassette A21, ATNAP2, ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN, ATPOP1, POP1 -0.352 -0.086
78 259793_at AT1G64380 [Integrase-type DNA-binding superfamily protein] -0.352 0.027
79 253293_at AT4G33905 [Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein] -0.307 -0.057
80 251858_at AT3G54820 PIP2;5, plasma membrane intrinsic protein 2;5, PIP2D, PLASMA MEMBRANE INTRINSIC PROTEIN 2D -0.306 0.010
81 249971_at AT5G19110 [Eukaryotic aspartyl protease family protein] -0.303 0.134
82 260727_at AT1G48100 [Pectin lyase-like superfamily protein] -0.298 -0.135
83 252363_at AT3G48460 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.297 -0.039
84 261785_at AT1G08230 [Transmembrane amino acid transporter family protein] -0.286 0.015
85 265544_at AT2G28260 ATCNGC15, cyclic nucleotide-gated channel 15, CNGC15, cyclic nucleotide-gated channel 15 -0.284 -0.021
86 248855_at AT5G46590 anac096, NAC domain containing protein 96, NAC096, NAC domain containing protein 96 -0.283 -0.014
87 259383_at AT3G16470 JAL35, jacalin-related lectin 35, JR1, JASMONATE RESPONSIVE 1 -0.278 0.097
88 261016_at AT1G26560 BGLU40, beta glucosidase 40 -0.278 -0.085
89 263796_at AT2G24540 AFR, ATTENUATED FAR-RED RESPONSE -0.271 -0.164
90 246235_at AT4G36830 HOS3-1 -0.266 0.047
91 263789_at AT2G24560 [GDSL-like Lipase/Acylhydrolase family protein] -0.262 -0.028
92 249118_at AT5G43870 [FUNCTIONS IN: phosphoinositide binding] -0.251 -0.048
93 245624_at AT4G14090 [UDP-Glycosyltransferase superfamily protein] -0.247 -0.086
94 253880_at AT4G27590 [Heavy metal transport/detoxification superfamily protein ] -0.247 -0.115
95 247827_at AT5G58500 LSH5, LIGHT SENSITIVE HYPOCOTYLS 5 -0.244 0.042
96 250083_at AT5G17220 ATGSTF12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12, GST26, GLUTATHIONE S-TRANSFERASE 26, GSTF12, glutathione S-transferase phi 12, TT19, TRANSPARENT TESTA 19 -0.244 -0.060
97 250690_at AT5G06530 ABCG22, ATP-binding cassette G22, AtABCG22, Arabidopsis thaliana ATP-binding cassette G22 -0.243 -0.012
98 258356_at AT3G14340 unknown -0.240 -0.016
99 250826_at AT5G05220 unknown -0.238 0.140
100 254066_at AT4G25480 ATCBF3, CBF3, C-REPEAT BINDING FACTOR 3, DREB1A, dehydration response element B1A -0.237 0.033
101 247904_at AT5G57390 AIL5, AINTEGUMENTA-like 5, CHO1, CHOTTO 1, EMK, EMBRYOMAKER, PLT5, PLETHORA 5 -0.230 0.033
102 250413_at AT5G11160 APT5, adenine phosphoribosyltransferase 5 -0.230 -0.046
103 247776_at AT5G58700 ATPLC4, PLC4, phosphatidylinositol-speciwc phospholipase C4 -0.229 -0.000