4.0:Information of module
amiR-ETP1/2
In comparison with Red/FR Light45min help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009605 response to external stimulus BP 1.487e-04
GO:0009313 oligosaccharide catabolic process BP 1.280e-03
GO:0046352 disaccharide catabolic process BP 1.280e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0000272 polysaccharide catabolic process BP 3.203e-05
GO:0019725 cellular homeostasis BP 5.623e-05
GO:0009987 cellular process BP 3.669e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
amiR-ETP1/2		 Log2 signal ratio
Red/FR Light45min
1 261648_at AT1G27730 STZ, salt tolerance zinc finger, ZAT10 0.994 -0.040
2 253707_at AT4G29200 [Beta-galactosidase related protein] 0.921 -0.056
3 266098_at AT2G37870 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.826 0.028
4 245766_at AT1G33580 [CACTA-like transposase family (Tnp2/En/Spm), has a 5.5e-96 P-value blast match to gb|AAG52024.1|AC022456_5 Tam1-homologous transposon protein TNP2, putative] 0.741 -0.007
5 248164_at AT5G54490 PBP1, pinoid-binding protein 1 0.673 0.044
6 254110_at AT4G25260 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.562 -0.008
7 256940_at AT3G30720 QQS, QUA-QUINE STARCH 0.533 0.007
8 245329_at AT4G14365 XBAT34, XB3 ortholog 4 in Arabidopsis thaliana 0.483 0.004
9 252474_at AT3G46620 unknown 0.454 -0.004
10 262050_at AT1G80130 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.432 -0.065
11 250891_at AT5G04530 KCS19, 3-ketoacyl-CoA synthase 19 0.401 0.024
12 262641_at AT1G62730 [Terpenoid synthases superfamily protein] 0.386 -0.120
13 253836_at AT4G27840 [SNARE-like superfamily protein] 0.385 -0.003
14 265063_at AT1G61500 [S-locus lectin protein kinase family protein] 0.375 -0.007
15 259850_at AT1G72240 unknown 0.370 -0.011
16 259535_at AT1G12280 SUMM2, suppressor of mkk1 mkk2 2 0.350 -0.037
17 256300_at AT1G69490 ANAC029, Arabidopsis NAC domain containing protein 29, ATNAP, NAC-LIKE, ACTIVATED BY AP3/PI, NAP, NAC-like, activated by AP3/PI 0.337 0.015
18 267080_at AT2G41190 [Transmembrane amino acid transporter family protein] 0.330 0.024
19 253122_at AT4G35987 CaM KMT, calmodulin N-methyltransferase 0.325 0.041
20 263043_at AT1G23350 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.321 0.045
21 256596_at AT3G28540 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.309 0.026
22 263617_at AT2G04670 [gypsy-like retrotransposon family, has a 1.2e-313 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)] 0.307 0.008
23 263772_at AT2G06255 ELF4-L3, ELF4-like 3 0.304 0.005
24 256021_at AT1G58270 ZW9 0.302 0.010
25 257396_at AT2G20875 EPF1, EPIDERMAL PATTERNING FACTOR 1 0.297 0.018
26 254608_at AT4G18910 ATNLM2, NOD26-LIKE INTRINSIC PROTEIN 2, NIP1;2, NOD26-like intrinsic protein 1;2, NLM2, NOD26-LIKE INTRINSIC PROTEIN 2 0.292 0.010
27 248332_at AT5G52640 ATHS83, AtHsp90-1, HEAT SHOCK PROTEIN 90-1, ATHSP90.1, heat shock protein 90.1, HSP81-1, HEAT SHOCK PROTEIN 81-1, HSP81.1, HSP83, HEAT SHOCK PROTEIN 83, HSP90.1, heat shock protein 90.1 0.288 0.310
28 249682_at AT5G36080 unknown 0.271 -0.008
29 260903_at AT1G02460 [Pectin lyase-like superfamily protein] 0.267 -0.007
30 255807_at AT4G10270 [Wound-responsive family protein] 0.262 0.053
31 256599_at AT3G14760 unknown 0.259 0.002
32 266415_at AT2G38530 cdf3, cell growth defect factor-3, LP2, LTP2, lipid transfer protein 2 0.258 0.003
33 260345_at AT1G69270 AtRPK1, RPK1, receptor-like protein kinase 1 0.252 0.026
34 266731_at AT2G03260 [EXS (ERD1/XPR1/SYG1) family protein] 0.247 0.008
35 250176_at AT5G14400 CYP724A1, cytochrome P450, family 724, subfamily A, polypeptide 1 0.244 -0.024
36 248321_at AT5G52740 [Copper transport protein family] 0.238 0.014
37 252649_at AT3G44680 AtHDA9, HDA09, HDA9, histone deacetylase 9 0.234 0.043
38 259606_at AT1G27920 MAP65-8, microtubule-associated protein 65-8 0.234 0.025
39 257334_at ATMG01370 ORF111D 0.230 -0.022
40 248341_at AT5G52220 unknown 0.225 0.082
41 265267_at AT2G42920 [Pentatricopeptide repeat (PPR-like) superfamily protein] 0.225 -0.012
42 265140_at AT1G51320 [F-box and associated interaction domains-containing protein] 0.222 -0.028
43 247478_at AT5G62360 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.684 0.086
44 245381_at AT4G17785 MYB39, myb domain protein 39 -0.462 -0.018
45 260417_at AT1G69770 CMT3, chromomethylase 3 -0.450 0.015
46 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.407 -0.016
47 251195_at AT3G62930 [Thioredoxin superfamily protein] -0.367 -0.020
48 247800_at AT5G58570 unknown -0.363 0.053
49 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 -0.335 -0.028
50 254828_at AT4G12550 AIR1, Auxin-Induced in Root cultures 1 -0.321 -0.014
51 260256_at AT1G74350 [Intron maturase, type II family protein] -0.319 -0.030
52 265341_at AT2G18360 [alpha/beta-Hydrolases superfamily protein] -0.310 -0.008
53 262045_at AT1G80240 DGR1, DUF642 L-GalL responsive gene 1 -0.308 0.001
54 247438_at AT5G62460 [RING/FYVE/PHD zinc finger superfamily protein] -0.308 0.008
55 250471_at AT5G10170 ATMIPS3, MYO-INOSITOL-1-PHOSTPATE SYNTHASE 3, MIPS3, myo-inositol-1-phosphate synthase 3 -0.307 0.041
56 261671_at AT1G18340 [basal transcription factor complex subunit-related] -0.298 0.002
57 246450_at AT5G16820 ATHSF3, ARABIDOPSIS HEAT SHOCK FACTOR 3, ATHSFA1B, ARABIDOPSIS THALIANA CLASS A HEAT SHOCK FACTOR 1B, HSF3, heat shock factor 3, HSFA1B, CLASS A HEAT SHOCK FACTOR 1B -0.296 -0.011
58 247145_at AT5G65600 LecRK-IX.2, L-type lectin receptor kinase IX.2 -0.291 -0.037
59 249378_at AT5G40450 unknown -0.283 -0.009
60 265771_at AT2G48030 [DNAse I-like superfamily protein] -0.278 -0.005
61 263259_at AT1G10560 ATPUB18, ARABIDOPSIS THALIANA PLANT U-BOX 18, PUB18, plant U-box 18 -0.272 -0.040
62 253613_at AT4G30320 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.271 -0.031
63 260831_at AT1G06830 [Glutaredoxin family protein] -0.267 0.002
64 246475_at AT5G16720 MyoB3, myosin binding protein 3 -0.266 0.018
65 246440_at AT5G17650 [glycine/proline-rich protein] -0.259 -0.018
66 259977_at AT1G76590 [PLATZ transcription factor family protein] -0.258 0.021
67 247867_at AT5G57630 CIPK21, CBL-interacting protein kinase 21, SnRK3.4, SNF1-RELATED PROTEIN KINASE 3.4 -0.256 -0.009
68 245173_at AT2G47520 AtERF71, Arabidopsis thaliana ethylene response factor 71, ERF71, ethylene response factor 71, HRE2, HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 2 -0.255 0.003
69 258537_at AT3G04210 [Disease resistance protein (TIR-NBS class)] -0.254 0.016
70 246653_at AT5G35200 [ENTH/ANTH/VHS superfamily protein] -0.250 -0.008
71 247167_at AT5G65850 [F-box and associated interaction domains-containing protein] -0.241 0.015
72 264744_at AT1G62050 [Ankyrin repeat family protein] -0.231 -0.002
73 247348_at AT5G63810 AtBGAL10, Arabidopsis thaliana beta-galactosidase 10, BGAL10, beta-galactosidase 10 -0.224 0.012
74 266929_at AT2G45850 AHL9, AT-hook motif nuclear localized protein 9 -0.218 -0.022
75 265785_at AT2G07290 unknown -0.218 -0.015
76 257515_at AT1G13290 DOT5, DEFECTIVELY ORGANIZED TRIBUTARIES 5, WIP6, WIP domain protein 6 -0.217 0.025
77 267461_at AT2G33830 AtDRM2, DRM2, dormancy associated gene 2 -0.215 0.009
78 254518_at AT4G19910 [Toll-Interleukin-Resistance (TIR) domain family protein] -0.211 0.004
79 262731_at AT1G16420 ATMC8, ARABIDOPSIS THALIANA METACASPASE 8, AtMCP2e, metacaspase 2e, MC8, metacaspase 8, MCP2e, metacaspase 2e -0.210 0.012
80 250223_at AT5G14070 ROXY2 -0.205 0.023
81 254972_at AT4G10440 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.205 -0.027
82 260887_at AT1G29160 [Dof-type zinc finger DNA-binding family protein] -0.202 -0.032
83 263498_at AT2G42610 LSH10, LIGHT SENSITIVE HYPOCOTYLS 10 -0.200 0.019