4.0:Information of module
pil5 red light
In comparison with Col0-PsmES4326-24hpi help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0045132 meiotic chromosome segregation BP 2.757e-04
GO:0044723 single-organism carbohydrate metabolic p... BP 8.219e-04
GO:0010332 response to gamma radiation BP 8.777e-04
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0008299 isoprenoid biosynthetic process BP 4.924e-10
GO:0009240 isopentenyl diphosphate biosynthetic pro... BP 7.947e-10
GO:0046490 isopentenyl diphosphate metabolic proces... BP 7.947e-10
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
pil5 red light		 Log2 signal ratio
Col0-PsmES4326-24hpi
1 249214_at AT5G42720 [Glycosyl hydrolase family 17 protein] 0.479 -0.145
2 261749_at AT1G76180 ERD14, EARLY RESPONSE TO DEHYDRATION 14 0.476 0.159
3 250062_at AT5G17760 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.416 0.610
4 266070_at AT2G18660 AtPNP-A, PNP-A, plant natriuretic peptide A 0.379 0.464
5 261889_at AT1G80810 [Tudor/PWWP/MBT superfamily protein] 0.352 0.107
6 264522_at AT1G10050 [glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein] 0.343 0.373
7 259224_at AT3G07800 AtTK1a, TK1a, thymidine kinase 1a 0.341 0.021
8 264777_at AT1G08630 THA1, threonine aldolase 1 0.317 0.230
9 264720_at AT1G70080 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] 0.310 0.110
10 264617_at AT2G17660 [RPM1-interacting protein 4 (RIN4) family protein] 0.282 0.163
11 259169_at AT3G03520 NPC3, non-specific phospholipase C3 0.278 0.126
12 250372_at AT5G11460 unknown 0.261 -0.165
13 258879_at AT3G03270 [Adenine nucleotide alpha hydrolases-like superfamily protein] 0.256 0.089
14 245456_at AT4G16950 RPP5, RECOGNITION OF PERONOSPORA PARASITICA 5 0.245 0.135
15 257574_at AT3G20710 [F-box family protein] 0.242 0.021
16 266511_at AT2G47680 [zinc finger (CCCH type) helicase family protein] 0.234 0.150
17 264604_at AT1G04650 unknown 0.233 0.044
18 256188_at AT1G30160 unknown 0.231 0.031
19 257154_at AT3G27210 unknown 0.231 0.659
20 266008_at AT2G37390 NAKR2, SODIUM POTASSIUM ROOT DEFECTIVE 2 0.215 0.028
21 260668_at AT1G19530 unknown 0.206 0.050
22 245903_at AT5G11100 ATSYTD, NTMC2T2.2, NTMC2TYPE2.2, SYT4, synaptotagmin 4, SYTD 0.202 0.018
23 259403_at AT1G17745 PGDH, 3-phosphoglycerate dehydrogenase, PGDH2, phosphoglycerate dehydrogenase 2 0.199 0.473
24 261643_at AT1G27720 TAF4, TBP-associated factor 4, TAF4B, TBP-associated factor 4B 0.191 0.114
25 258170_at AT3G21600 [Senescence/dehydration-associated protein-related] 0.178 0.155
26 249736_at AT5G24460 unknown 0.178 0.101
27 250186_at AT5G14500 [aldose 1-epimerase family protein] 0.176 -0.057
28 259186_at AT3G01590 [Galactose mutarotase-like superfamily protein] 0.169 0.212
29 247974_at AT5G56780 ATET2, ARABIDOPSIS EFFECTOR OF TRANSCRIPTION2, ET2, effector of transcription2 0.165 -0.115
30 259852_at AT1G72280 AERO1, endoplasmic reticulum oxidoreductins 1, ERO1, endoplasmic reticulum oxidoreductins 1 0.164 0.373
31 264870_at AT1G24210 [Paired amphipathic helix (PAH2) superfamily protein] 0.163 -0.067
32 249237_at AT5G42050 [DCD (Development and Cell Death) domain protein] 0.158 0.333
33 258117_at AT3G14700 [SART-1 family] 0.156 0.550
34 257799_at AT3G15890 [Protein kinase superfamily protein] 0.154 0.057
35 256138_at AT1G48670 [auxin-responsive GH3 family protein] 0.147 0.102
36 259606_at AT1G27920 MAP65-8, microtubule-associated protein 65-8 0.143 0.079
37 247333_at AT5G63600 ATFLS5, FLS5, flavonol synthase 5 0.143 0.106
38 245276_at AT4G16780 ATHB-2, homeobox protein 2, ATHB2, ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2, HAT4, HB-2, homeobox protein 2 0.139 -0.016
39 253038_at AT4G37790 HAT22 0.139 0.185
40 259087_at AT3G04980 [DNAJ heat shock N-terminal domain-containing protein] 0.137 0.032
41 261629_at AT1G49980 [DNA/RNA polymerases superfamily protein] 0.135 -0.076
42 264287_at AT1G61930 unknown 0.131 0.100
43 258436_at AT3G16720 ATL2, TOXICOS EN LEVADURA 2, TL2, TOXICOS EN LEVADURA 2 0.130 0.330
44 266566_at AT2G24040 [Low temperature and salt responsive protein family] 0.129 0.350
45 255302_at AT4G04830 ATMSRB5, methionine sulfoxide reductase B5, MSRB5, methionine sulfoxide reductase B5 -0.522 -0.707
46 263207_at AT1G10550 XET, XYLOGLUCAN:XYLOGLUCOSYL TRANSFERASE 33, XTH33, xyloglucan:xyloglucosyl transferase 33 -0.485 -0.066
47 246884_at AT5G26220 AtGGCT2;1, GGCT2;1, gamma-glutamyl cyclotransferase 2;1 -0.480 0.125
48 256125_at AT1G18250 ATLP-1 -0.466 -0.317
49 266215_at AT2G06850 EXGT-A1, endoxyloglucan transferase A1, EXT, ENDOXYLOGLUCAN TRANSFERASE, XTH4, xyloglucan endotransglucosylase/hydrolase 4 -0.462 -0.919
50 249752_at AT5G24660 LSU2, RESPONSE TO LOW SULFUR 2 -0.460 -0.308
51 267389_at AT2G44460 BGLU28, beta glucosidase 28 -0.449 0.035
52 264371_at AT1G12090 ELP, extensin-like protein -0.449 -1.087
53 263829_at AT2G40435 unknown -0.411 0.116
54 251899_at AT3G54400 [Eukaryotic aspartyl protease family protein] -0.389 -0.491
55 254387_at AT4G21850 ATMSRB9, methionine sulfoxide reductase B9, MSRB9, methionine sulfoxide reductase B9 -0.379 0.635
56 252624_at AT3G44735 ATPSK3, PHYTOSULFOKINE 3 PRECURSOR, PSK1, PSK3, PHYTOSULFOKINE 3 PRECURSOR -0.379 -0.440
57 261075_at AT1G07280 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.374 -0.147
58 248372_at AT5G51850 TRM24, TON1 Recruiting Motif 24 -0.369 -0.152
59 256021_at AT1G58270 ZW9 -0.363 -0.107
60 256302_at AT1G69526 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.362 -0.215
61 261975_at AT1G64640 AtENODL8, ENODL8, early nodulin-like protein 8 -0.349 -0.594
62 261949_at AT1G64670 BDG1, BODYGUARD1, CED1, 9-CIS EPOXYCAROTENOID DIOXYGENASE DEFECTIVE 1 -0.347 -0.532
63 256275_at AT3G12110 ACT11, actin-11 -0.331 -0.675
64 247035_at AT5G67110 ALC, ALCATRAZ -0.330 0.013
65 248921_at AT5G45950 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.315 -0.780
66 258299_at AT3G23410 ATFAO3, ARABIDOPSIS FATTY ALCOHOL OXIDASE 3, FAO3, fatty alcohol oxidase 3 -0.287 -0.023
67 260541_at AT2G43530 [Scorpion toxin-like knottin superfamily protein] -0.282 0.029
68 262414_at AT1G49430 LACS2, long-chain acyl-CoA synthetase 2, LRD2, LATERAL ROOT DEVELOPMENT 2 -0.278 -0.646
69 248246_at AT5G53200 TRY, TRIPTYCHON -0.274 -0.526
70 253073_at AT4G37410 CYP81F4, cytochrome P450, family 81, subfamily F, polypeptide 4 -0.269 0.052
71 262969_at AT1G75710 [C2H2-like zinc finger protein] -0.267 -0.322
72 245196_at AT1G67750 [Pectate lyase family protein] -0.266 -0.760
73 252623_at AT3G45320 unknown -0.263 0.060
74 254363_at AT4G22010 sks4, SKU5 similar 4 -0.251 -0.406
75 250875_at AT5G04020 [calmodulin binding] -0.251 0.251
76 256528_at AT1G66140 ZFP4, zinc finger protein 4 -0.251 -0.224
77 246002_at AT5G20740 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.251 -0.341
78 253317_at AT4G33960 unknown -0.251 -0.065
79 247786_at AT5G58600 PMR5, POWDERY MILDEW RESISTANT 5, TBL44, TRICHOME BIREFRINGENCE-LIKE 44 -0.249 0.003
80 263979_at AT2G42840 PDF1, protodermal factor 1 -0.245 -0.173
81 251846_at AT3G54560 HTA11, histone H2A 11 -0.238 -0.040
82 267173_at AT2G37560 ATORC2, ORIGIN RECOGNITION COMPLEX SECOND LARGEST SUBUNIT 2, ORC2, origin recognition complex second largest subunit 2 -0.237 0.028
83 255751_at AT1G31950 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.233 0.112
84 256516_at AT1G66150 TMK1, transmembrane kinase 1 -0.227 -0.327
85 261016_at AT1G26560 BGLU40, beta glucosidase 40 -0.223 -0.488
86 252943_at AT4G39330 ATCAD9, CAD9, cinnamyl alcohol dehydrogenase 9 -0.222 -0.956
87 248839_at AT5G46690 bHLH071, beta HLH protein 71 -0.220 -0.636