4.0:Information of module
penta mutant (higher order mutant)
In comparison with seedlings by volatiles from leafminer damaged Lima bean 48h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0050896 response to stimulus BP 1.018e-08
GO:0010035 response to inorganic substance BP 2.702e-07
GO:0065007 biological regulation BP 3.785e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010224 response to UV-B BP 7.394e-16
GO:0042254 ribosome biogenesis BP 1.765e-13
GO:0055086 nucleobase-containing small molecule met... BP 3.188e-13
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
penta mutant (higher order mutant)		 Log2 signal ratio
seedlings by volatiles from leafminer damaged Lima bean 48h
1 251196_at AT3G62950 [Thioredoxin superfamily protein] 0.583 -0.604
2 247159_at AT5G65800 ACS5, ACC synthase 5, ATACS5, CIN5, CYTOKININ-INSENSITIVE 5, ETO2, ETHYLENE OVERPRODUCER 2 0.535 0.035
3 249202_at AT5G42580 CYP705A12, cytochrome P450, family 705, subfamily A, polypeptide 12 0.450 -0.019
4 248729_at AT5G48010 AtTHAS1, Arabidopsis thaliana thalianol synthase 1, THAS, THALIANOL SYNTHASE, THAS1, thalianol synthase 1 0.420 0.018
5 258225_at AT3G15630 unknown 0.306 -0.182
6 265478_at AT2G15890 MEE14, maternal effect embryo arrest 14 0.301 -0.096
7 249205_at AT5G42600 MRN1, marneral synthase 1 0.264 -0.090
8 255381_at AT4G03510 ATRMA1, RMA1, RING membrane-anchor 1 0.259 -0.160
9 249065_at AT5G44260 AtTZF5, TZF5, Tandem CCCH Zinc Finger protein 5 0.254 -0.009
10 261567_at AT1G33055 unknown 0.244 -0.138
11 248727_at AT5G47990 CYP705A5, cytochrome P450, family 705, subfamily A, polypeptide 5, THAD, THALIAN-DIOL DESATURASE, THAD1, THALIAN-DIOL DESATURASE 0.237 0.006
12 251013_at AT5G02540 [NAD(P)-binding Rossmann-fold superfamily protein] 0.236 -0.018
13 245449_at AT4G16870 [copia-like retrotransposon family, has a 0. P-value blast match to dbj|BAA78426.1| polyprotein (AtRE2-1) (Arabidopsis thaliana) (Ty1_Copia-element)] 0.235 -0.064
14 251221_at AT3G62550 [Adenine nucleotide alpha hydrolases-like superfamily protein] 0.235 -0.044
15 248794_at AT5G47220 ATERF-2, ETHYLENE RESPONSE FACTOR- 2, ATERF2, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2, ERF2, ethylene responsive element binding factor 2 0.229 0.149
16 248793_at AT5G47240 atnudt8, nudix hydrolase homolog 8, NUDT8, nudix hydrolase homolog 8 0.225 -0.007
17 248432_at AT5G51390 unknown 0.225 -0.304
18 262301_at AT1G70880 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.218 -0.005
19 259982_at AT1G76410 ATL8 0.218 -0.119
20 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] 0.218 -0.027
21 254909_at AT4G11210 [Disease resistance-responsive (dirigent-like protein) family protein] 0.215 0.107
22 261157_at AT1G34510 [Peroxidase superfamily protein] 0.212 0.091
23 259364_at AT1G13260 EDF4, ETHYLENE RESPONSE DNA BINDING FACTOR 4, RAV1, related to ABI3/VP1 1 0.208 -0.032
24 259977_at AT1G76590 [PLATZ transcription factor family protein] 0.204 -0.082
25 251977_at AT3G53250 SAUR57, SMALL AUXIN UPREGULATED RNA 57 0.202 -0.000
26 248728_at AT5G48000 CYP708 A2, CYTOCHROME P450, FAMILY 708, SUBFAMILY A, POLYPEPTIDE 2, CYP708A2, cytochrome P450, family 708, subfamily A, polypeptide 2, THAH, THALIANOL HYDROXYLASE, THAH1, THALIANOL HYDROXYLASE 1 0.190 0.026
27 245602_at AT4G14270 unknown 0.189 0.002
28 262549_at AT1G31290 AGO3, ARGONAUTE 3 0.188 -0.154
29 256368_at AT1G66800 [NAD(P)-binding Rossmann-fold superfamily protein] 0.187 -0.035
30 249862_at AT5G22920 [CHY-type/CTCHY-type/RING-type Zinc finger protein] 0.183 -0.190
31 262756_at AT1G16370 ATOCT6, ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER 6, OCT6, organic cation/carnitine transporter 6 0.182 -0.058
32 248725_at AT5G47980 [HXXXD-type acyl-transferase family protein] 0.181 -0.038
33 258939_at AT3G10020 unknown 0.176 -0.137
34 260431_at AT1G68190 BBX27, B-box domain protein 27 0.176 -0.234
35 252250_at AT3G49790 [Carbohydrate-binding protein] 0.176 -0.125
36 249337_at AT5G41080 AtGDPD2, GDPD2, glycerophosphodiester phosphodiesterase 2 0.174 -0.096
37 254424_at AT4G21510 AtFBS2, FBS2, F-box stress induced 2 0.174 -0.033
38 262838_at AT1G14960 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.173 0.026
39 250381_at AT5G11610 [Exostosin family protein] 0.171 -0.037
40 249203_at AT5G42590 CYP71A16, cytochrome P450, family 71, subfamily A, polypeptide 16, MRO, marneral oxidase 0.171 -0.023
41 258402_at AT3G15450 [Aluminium induced protein with YGL and LRDR motifs] 0.170 -0.197
42 261395_at AT1G79700 WRI4, WRINKLED 4 0.169 -0.270
43 261265_at AT1G26800 [RING/U-box superfamily protein] 0.169 -0.111
44 263594_at AT2G01880 ATPAP7, PURPLE ACID PHOSPHATASE 7, PAP7, purple acid phosphatase 7 0.168 0.164
45 264467_at AT1G10140 [Uncharacterised conserved protein UCP031279] 0.168 -0.021
46 260741_at AT1G15040 GAT, glutamine amidotransferase, GAT1_2.1, glutamine amidotransferase 1_2.1 0.168 -0.030
47 256098_at AT1G13700 PGL1, 6-phosphogluconolactonase 1 0.166 -0.255
48 249941_at AT5G22270 unknown 0.165 -0.035
49 246432_at AT5G17490 AtRGL3, RGL3, RGA-like protein 3 0.164 -0.108
50 246195_at AT4G36410 UBC17, ubiquitin-conjugating enzyme 17 0.164 -0.050
51 265067_at AT1G03850 ATGRXS13, glutaredoxin 13, GRXS13, glutaredoxin 13 0.163 -0.128
52 265031_at AT1G61590 [Protein kinase superfamily protein] 0.158 -0.061
53 255568_at AT4G01250 AtWRKY22, WRKY22 0.157 -0.135
54 247293_at AT5G64510 TIN1, tunicamycin induced 1 0.156 0.099
55 265987_at AT2G24240 [BTB/POZ domain with WD40/YVTN repeat-like protein] 0.154 -0.137
56 257774_at AT3G29250 AtSDR4, SDR4, short-chain dehydrogenase reductase 4 0.153 0.132
57 267477_at AT2G02710 PLP, PAS/LOV PROTEIN, PLPA, PAS/LOV PROTEIN A, PLPB, PAS/LOV protein B, PLPC, PAS/LOV PROTEIN C 0.152 -0.147
58 246888_at AT5G26270 unknown 0.151 -0.105
59 254665_at AT4G18340 [Glycosyl hydrolase superfamily protein] 0.151 -0.093
60 248723_at AT5G47950 [HXXXD-type acyl-transferase family protein] 0.151 0.007
61 259751_at AT1G71030 ATMYBL2, ARABIDOPSIS MYB-LIKE 2, MYBL2, MYB-like 2 0.150 -0.192
62 263953_at AT2G36050 ATOFP15, ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 15, OFP15, ovate family protein 15 0.150 -0.290
63 267078_at AT2G40960 [Single-stranded nucleic acid binding R3H protein] 0.149 -0.070
64 265481_at AT2G15960 unknown 0.148 -0.111
65 247867_at AT5G57630 CIPK21, CBL-interacting protein kinase 21, SnRK3.4, SNF1-RELATED PROTEIN KINASE 3.4 0.143 0.005
66 262010_at AT1G35612 [expressed protein] 0.143 -0.201
67 254828_at AT4G12550 AIR1, Auxin-Induced in Root cultures 1 0.143 -0.044
68 254301_at AT4G22790 [MATE efflux family protein] 0.140 0.046
69 247754_at AT5G59080 unknown 0.140 -0.172
70 266016_at AT2G18670 [RING/U-box superfamily protein] 0.139 -0.054
71 247585_at AT5G60680 unknown 0.139 0.028
72 249128_at AT5G43440 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.137 -0.017
73 259252_at AT3G07610 IBM1, increase in bonsai methylation 1 0.137 -0.039
74 249848_at AT5G23220 NIC3, nicotinamidase 3 0.136 -0.049
75 256935_at AT3G22570 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.135 -0.034
76 254193_at AT4G23870 unknown 0.135 -0.062
77 250132_at AT5G16560 KAN, KANADI, KAN1, KANADI 1 0.135 -0.029
78 252464_at AT3G47160 [RING/U-box superfamily protein] 0.135 -0.004
79 252175_at AT3G50700 AtIDD2, indeterminate(ID)-domain 2, IDD2, indeterminate(ID)-domain 2 0.134 -0.091
80 261453_at AT1G21130 IGMT4, indole glucosinolate O-methyltransferase 4 0.132 -0.052
81 259846_at AT1G72140 [Major facilitator superfamily protein] 0.132 -0.177
82 253872_at AT4G27410 ANAC072, Arabidopsis NAC domain containing protein 72, RD26, RESPONSIVE TO DESICCATION 26 0.130 -0.029
83 248204_at AT5G54280 ATM2, myosin 2, ATM4, ARABIDOPSIS THALIANA MYOSIN 4, ATMYOS1, ARABIDOPSIS THALIANA MYOSIN 1 0.129 -0.164
84 250810_at AT5G05090 [Homeodomain-like superfamily protein] 0.128 -0.147
85 259163_at AT3G01490 [Protein kinase superfamily protein] 0.128 -0.110
86 259160_at AT3G05410 [Photosystem II reaction center PsbP family protein] 0.127 0.001
87 259365_at AT1G13300 HRS1, HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1 0.127 -0.019
88 265246_at AT2G43050 ATPMEPCRD 0.126 -0.193
89 261292_at AT1G36940 unknown 0.125 -0.152
90 248910_at AT5G45820 CIPK20, CBL-interacting protein kinase 20, PKS18, PROTEIN KINASE 18, SnRK3.6, SNF1-RELATED PROTEIN KINASE 3.6 0.125 -0.195
91 255980_at AT1G33970 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.124 0.005
92 262170_at AT1G74940 unknown 0.124 -0.058
93 260716_at AT1G48130 ATPER1, 1-cysteine peroxiredoxin 1, PER1, 1-cysteine peroxiredoxin 1 0.123 -0.040
94 256420_at AT1G33475 [SNARE-like superfamily protein] 0.122 -0.017
95 254926_at AT4G11280 ACS6, 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6, ATACS6 -0.392 0.086
96 245306_at AT4G14690 ELIP2, EARLY LIGHT-INDUCIBLE PROTEIN 2 -0.293 0.035
97 246228_at AT4G36430 [Peroxidase superfamily protein] -0.290 0.102
98 247463_at AT5G62210 [Embryo-specific protein 3, (ATS3)] -0.234 0.195
99 258807_at AT3G04030 MYR2 -0.232 0.015
100 247814_at AT5G58310 ATMES18, ARABIDOPSIS THALIANA METHYL ESTERASE 18, MES18, methyl esterase 18 -0.225 0.091
101 266141_at AT2G02120 LCR70, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 70, PDF2.1 -0.205 0.038
102 261027_at AT1G01340 ACBK1, ATCNGC10, cyclic nucleotide gated channel 10, CNGC10, cyclic nucleotide gated channel 10 -0.204 -0.068
103 249727_at AT5G35490 ATMRU1, ARABIDOPSIS MTO 1 RESPONDING UP 1, MRU1, MTO 1 RESPONDING UP 1 -0.199 -0.207
104 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN -0.192 0.315
105 266415_at AT2G38530 cdf3, cell growth defect factor-3, LP2, LTP2, lipid transfer protein 2 -0.177 0.010
106 263005_at AT1G54540 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] -0.176 -0.060
107 245624_at AT4G14090 [UDP-Glycosyltransferase superfamily protein] -0.176 0.572
108 255891_at AT1G17870 ATEGY3, ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 3, EGY3, ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 3 -0.169 -0.037
109 247780_at AT5G58770 AtcPT4, cPT4, cis-prenyltransferase 4 -0.167 0.102
110 249752_at AT5G24660 LSU2, RESPONSE TO LOW SULFUR 2 -0.159 0.323
111 249867_at AT5G23020 IMS2, 2-isopropylmalate synthase 2, MAM-L, METHYLTHIOALKYMALATE SYNTHASE-LIKE, MAM3 -0.158 0.089
112 257456_at AT2G18120 SRS4, SHI-related sequence 4 -0.157 -0.075
113 247024_at AT5G66985 unknown -0.154 0.157
114 261052_at AT1G01440 unknown -0.153 -0.105
115 245401_at AT4G17670 unknown -0.152 0.072
116 250702_at AT5G06730 [Peroxidase superfamily protein] -0.151 0.118
117 249614_at AT5G37300 WSD1 -0.150 0.038
118 261582_at AT1G01160 GIF2, GRF1-interacting factor 2 -0.150 -0.018
119 261043_at AT1G01220 AtFKGP, Arabidopsis thaliana L-fucokinase/GDP-L-fucose pyrophosphorylase, FKGP, L-fucokinase/GDP-L-fucose pyrophosphorylase -0.148 -0.030
120 251154_at AT3G63110 ATIPT3, isopentenyltransferase 3, IPT3, isopentenyltransferase 3 -0.147 0.085
121 249191_at AT5G42760 [Leucine carboxyl methyltransferase] -0.146 0.042
122 267515_at AT2G45680 TCP9, TCP domain protein 9 -0.145 -0.004
123 253405_at AT4G32800 [Integrase-type DNA-binding superfamily protein] -0.143 0.022
124 265634_at AT2G25530 [AFG1-like ATPase family protein] -0.143 0.135
125 262212_at AT1G74890 ARR15, response regulator 15 -0.142 -0.067
126 248820_at AT5G47060 unknown -0.141 0.194
127 249622_at AT5G37550 unknown -0.141 0.033
128 260973_at AT1G53490 HEI10, homolog of human HEI10 ( Enhancer of cell Invasion No.10) -0.138 0.102
129 251593_at AT3G57660 NRPA1, nuclear RNA polymerase A1 -0.137 0.023
130 254235_at AT4G23750 CRF2, cytokinin response factor 2, TMO3, TARGET OF MONOPTEROS 3 -0.135 0.006
131 258965_at AT3G10530 [Transducin/WD40 repeat-like superfamily protein] -0.135 0.085
132 261044_at AT1G01290 CNX3, cofactor of nitrate reductase and xanthine dehydrogenase 3 -0.134 0.025
133 250420_at AT5G11260 HY5, ELONGATED HYPOCOTYL 5, TED 5, REVERSAL OF THE DET PHENOTYPE 5 -0.134 0.003
134 261048_at AT1G01420 UGT72B3, UDP-glucosyl transferase 72B3 -0.131 0.006
135 246884_at AT5G26220 AtGGCT2;1, GGCT2;1, gamma-glutamyl cyclotransferase 2;1 -0.130 0.381
136 247612_at AT5G60730 [Anion-transporting ATPase] -0.130 -0.042
137 256188_at AT1G30160 unknown -0.129 0.024
138 256319_at AT1G35910 TPPD, trehalose-6-phosphate phosphatase D -0.128 0.248
139 250533_at AT5G08640 ATFLS1, FLS, FLAVONOL SYNTHASE, FLS1, flavonol synthase 1 -0.127 0.334
140 258545_at AT3G07050 NSN1, nucleostemin-like 1 -0.124 0.046
141 254240_at AT4G23496 SP1L5, SPIRAL1-like5 -0.123 -0.010
142 256675_at AT3G52170 [DNA binding] -0.123 0.072
143 265665_at AT2G27420 [Cysteine proteinases superfamily protein] -0.122 -0.066
144 245560_at AT4G15480 UGT84A1 -0.122 0.032
145 261055_at AT1G01300 [Eukaryotic aspartyl protease family protein] -0.121 0.005
146 245762_at AT1G27880 [DEAD/DEAH box RNA helicase family protein ] -0.120 -0.033
147 252958_at AT4G38620 ATMYB4, myb domain protein 4, MYB4, myb domain protein 4 -0.119 0.057
148 257074_at AT3G19660 unknown -0.117 0.077
149 262004_at AT1G64480 CBL8, calcineurin B-like protein 8 -0.116 -0.011
150 257262_at AT3G21890 BBX31, B-box domain protein 31 -0.116 0.061
151 257511_at AT1G43000 [PLATZ transcription factor family protein] -0.116 -0.003
152 258677_at AT3G08730 ATPK1, ARABIDOPSIS THALIANA PROTEIN-SERINE KINASE 1, ATPK6, ARABIDOPSIS THALIANA PROTEIN-SERINE KINASE 6, ATS6K1, PK1, protein-serine kinase 1, PK6, ROTEIN-SERINE KINASE 6, S6K1, P70 RIBOSOMAL S6 KINASE -0.115 -0.037
153 259363_at AT1G13270 MAP1B, METHIONINE AMINOPEPTIDASE 1B, MAP1C, methionine aminopeptidase 1B -0.114 0.071
154 260475_at AT1G11080 scpl31, serine carboxypeptidase-like 31 -0.113 -0.088
155 248429_at AT5G51770 [Protein kinase superfamily protein] -0.113 0.099
156 252123_at AT3G51240 F3'H, F3H, flavanone 3-hydroxylase, TT6, TRANSPARENT TESTA 6 -0.113 0.445
157 260955_at AT1G06000 [UDP-Glycosyltransferase superfamily protein] -0.113 0.235
158 246274_at AT4G36620 GATA19, GATA transcription factor 19, HANL2, hanaba taranu like 2 -0.112 -0.141
159 260631_at AT1G62350 [Pentatricopeptide repeat (PPR) superfamily protein] -0.112 0.047
160 252864_at AT4G39740 HCC2, homologue of copper chaperone SCO1 2 -0.111 0.041
161 249458_at AT5G39560 [Galactose oxidase/kelch repeat superfamily protein] -0.109 -0.109
162 247046_at AT5G66540 unknown -0.109 0.069
163 248185_at AT5G54060 UF3GT, UDP-glucose:flavonoid 3-o-glucosyltransferase, UGT79B1, UDP-glucosyl transferase 79B1 -0.108 0.555
164 262518_at AT1G17170 ATGSTU24, glutathione S-transferase TAU 24, GST, Arabidopsis thaliana Glutathione S-transferase (class tau) 24, GSTU24, glutathione S-transferase TAU 24 -0.107 0.547
165 258861_at AT3G02060 [DEAD/DEAH box helicase, putative] -0.106 0.017
166 264646_at AT1G08860 BON3, BONZAI 3 -0.106 -0.023
167 252442_at AT3G46940 DUT1, DUTP-PYROPHOSPHATASE-LIKE 1 -0.104 0.035
168 256797_at AT3G18600 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.104 0.091
169 248841_at AT5G46740 UBP21, ubiquitin-specific protease 21 -0.104 0.019
170 261907_at AT1G65060 4CL3, 4-coumarate:CoA ligase 3 -0.103 0.177
171 261569_at AT1G01060 LHY, LATE ELONGATED HYPOCOTYL, LHY1, LATE ELONGATED HYPOCOTYL 1 -0.103 -0.089
172 255465_at AT4G02990 BSM, BELAYA SMERT, RUG2, RUGOSA 2 -0.102 0.079
173 246966_at AT5G24850 CRY3, cryptochrome 3 -0.102 0.079
174 252010_at AT3G52740 unknown -0.100 0.003
175 246461_at AT5G16930 [AAA-type ATPase family protein] -0.100 0.149
176 251090_at AT5G01340 AtmSFC1, mSFC1, mitochondrial succinate-fumarate carrier 1 -0.099 0.097
177 261263_at AT1G26790 [Dof-type zinc finger DNA-binding family protein] -0.099 0.031
178 256511_at AT1G33390 ATFAS4, FASCIATED STEM 4, FAS4, FASCIATED STEM 4 -0.099 0.052
179 253471_at AT4G32220 [gypsy-like retrotransposon family, has a 4.8e-57 P-value blast match to GB:AAD19359 polyprotein (gypsy_Ty3-element) (Sorghum bicolor)] -0.099 0.045
180 266801_at AT2G22870 EMB2001, embryo defective 2001 -0.099 0.084
181 263975_at AT2G42710 [Ribosomal protein L1p/L10e family] -0.098 0.116
182 258701_at AT3G09720 AtRH57, RH57, RNA helicase 57 -0.098 0.064
183 258202_at AT3G13940 [DNA binding] -0.098 0.087
184 253777_at AT4G28450 [nucleotide binding] -0.097 0.087
185 259537_at AT1G12370 PHR1, photolyase 1, UVR2, UV RESISTANCE 2 -0.097 0.053
186 265474_at AT2G15690 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.097 0.097
187 261972_at AT1G64600 [methyltransferases] -0.097 0.076