4.0:Information of module
shoot hypoxia total
In comparison with Laer pretreat GA Flg22 1h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0007154 cell communication BP 1.915e-13
GO:0006950 response to stress BP 8.549e-13
GO:0051716 cellular response to stimulus BP 1.302e-12
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0071554 cell wall organization or biogenesis BP 5.422e-05
GO:0048731 system development BP 6.286e-05
GO:0010073 meristem maintenance BP 1.106e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
shoot hypoxia total		 Log2 signal ratio
Laer pretreat GA Flg22 1h
1 250464_at AT5G10040 unknown 1.483 -0.423
2 264846_at AT2G17850 [Rhodanese/Cell cycle control phosphatase superfamily protein] 1.191 -0.208
3 259879_at AT1G76650 CML38, calmodulin-like 38 1.154 0.198
4 247024_at AT5G66985 unknown 1.127 -0.095
5 252882_at AT4G39675 unknown 1.056 -0.075
6 258930_at AT3G10040 [sequence-specific DNA binding transcription factors] 1.010 -0.005
7 247431_at AT5G62520 SRO5, similar to RCD one 5 0.978 0.242
8 260668_at AT1G19530 unknown 0.899 0.158
9 253298_at AT4G33560 [Wound-responsive family protein] 0.846 -0.273
10 245226_at AT3G29970 [B12D protein] 0.846 -0.030
11 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 0.845 -0.234
12 257925_at AT3G23170 unknown 0.832 0.141
13 246001_at AT5G20790 unknown 0.831 0.072
14 262382_at AT1G72920 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.818 -0.043
15 254300_at AT4G22780 ACR7, ACT domain repeat 7 0.813 0.090
16 251705_at AT3G56400 ATWRKY70, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 70, WRKY70, WRKY DNA-binding protein 70 0.798 0.118
17 245173_at AT2G47520 AtERF71, Arabidopsis thaliana ethylene response factor 71, ERF71, ethylene response factor 71, HRE2, HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 2 0.785 0.144
18 257153_at AT3G27220 [Galactose oxidase/kelch repeat superfamily protein] 0.781 0.082
19 246071_at AT5G20150 ATSPX1, ARABIDOPSIS THALIANA SPX DOMAIN GENE 1, SPX1, SPX domain gene 1 0.755 0.007
20 252746_at AT3G43190 ATSUS4, ARABIDOPSIS THALIANA SUCROSE SYNTHASE 4, SUS4, sucrose synthase 4 0.752 -0.026
21 261567_at AT1G33055 unknown 0.734 -0.069
22 251026_at AT5G02200 FHL, far-red-elongated hypocotyl1-like 0.725 0.089
23 255807_at AT4G10270 [Wound-responsive family protein] 0.720 -0.159
24 257654_at AT3G13310 DJC66, DNA J protein C66 0.710 0.143
25 263391_at AT2G11810 ATMGD3, MGD3, MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 3, MGDC, monogalactosyldiacylglycerol synthase type C 0.705 -0.385
26 249384_at AT5G39890 unknown 0.632 0.082
27 254200_at AT4G24110 unknown 0.620 -0.061
28 245998_at AT5G20830 ASUS1, atsus1, SUS1, sucrose synthase 1 0.615 -0.030
29 253573_at AT4G31020 [alpha/beta-Hydrolases superfamily protein] 0.611 0.291
30 249337_at AT5G41080 AtGDPD2, GDPD2, glycerophosphodiester phosphodiesterase 2 0.605 0.032
31 258487_at AT3G02550 LBD41, LOB domain-containing protein 41 0.589 -0.002
32 251677_at AT3G56980 BHLH039, bHLH39, basic helix-loop-helix 39, ORG3, OBP3-RESPONSIVE GENE 3 0.576 0.139
33 264647_at AT1G09090 ATRBOHB, respiratory burst oxidase homolog B, ATRBOHB-BETA, RBOHB, respiratory burst oxidase homolog B 0.571 0.367
34 262383_at AT1G72940 [Toll-Interleukin-Resistance (TIR) domain-containing protein] 0.568 -0.001
35 245757_at AT1G35140 EXL1, EXORDIUM like 1, PHI-1, PHOSPHATE-INDUCED 1 0.562 -0.107
36 250152_at AT5G15120 unknown 0.559 0.287
37 258879_at AT3G03270 [Adenine nucleotide alpha hydrolases-like superfamily protein] 0.531 0.088
38 264953_at AT1G77120 ADH, ALCOHOL DEHYDROGENASE, ADH1, alcohol dehydrogenase 1, ATADH, ARABIDOPSIS THALIANA ALCOHOL DEHYDROGENASE, ATADH1 0.517 -0.063
39 245976_at AT5G13080 ATWRKY75, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY75, WRKY DNA-binding protein 75 0.516 0.183
40 253874_at AT4G27450 [Aluminium induced protein with YGL and LRDR motifs] 0.512 -0.021
41 248964_at AT5G45340 CYP707A3, cytochrome P450, family 707, subfamily A, polypeptide 3 0.510 0.264
42 264836_at AT1G03610 unknown 0.499 0.048
43 260662_at AT1G19540 [NmrA-like negative transcriptional regulator family protein] 0.497 -0.037
44 264436_at AT1G10370 ATGSTU17, GLUTATHIONE S-TRANSFERASE TAU 17, ERD9, EARLY-RESPONSIVE TO DEHYDRATION 9, GST30, GLUTATHIONE S-TRANSFERASE 30, GST30B, GLUTATHIONE S-TRANSFERASE 30B, GSTU17, GLUTATHIONE S-TRANSFERASE U17 0.497 -0.022
45 261684_at AT1G47400 unknown 0.496 0.146
46 253404_at AT4G32840 PFK6, phosphofructokinase 6 0.493 -0.085
47 260727_at AT1G48100 [Pectin lyase-like superfamily protein] 0.487 -0.093
48 265948_at AT2G19590 ACO1, ACC oxidase 1, ATACO1 0.482 0.099
49 261717_at AT1G18400 BEE1, BR enhanced expression 1 0.481 0.016
50 252427_at AT3G47640 PYE, POPEYE 0.480 -0.000
51 258856_at AT3G02040 AtGDPD1, GDPD1, Glycerophosphodiester phosphodiesterase 1, SRG3, senescence-related gene 3 0.478 0.043
52 262164_at AT1G78070 [Transducin/WD40 repeat-like superfamily protein] 0.477 -0.006
53 249467_at AT5G39610 ANAC092, Arabidopsis NAC domain containing protein 92, ATNAC2, NAC domain containing protein 2, ATNAC6, NAC domain containing protein 6, NAC2, NAC domain containing protein 2, NAC6, NAC domain containing protein 6, ORE1, ORESARA 1 -0.582 0.108
54 260070_at AT1G73830 BEE3, BR enhanced expression 3 -0.563 -0.291
55 261975_at AT1G64640 AtENODL8, ENODL8, early nodulin-like protein 8 -0.401 0.048
56 247768_at AT5G58900 [Homeodomain-like transcriptional regulator] -0.396 0.099
57 255524_at AT4G02330 AtPME41, ATPMEPCRB, PME41, pectin methylesterase 41 -0.334 0.130
58 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 -0.316 0.110
59 260806_at AT1G78260 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.307 0.064
60 251791_at AT3G55500 ATEXP16, ATEXPA16, expansin A16, ATHEXP ALPHA 1.7, EXP16, EXPANSIN 16, EXPA16, expansin A16 -0.301 0.071
61 261395_at AT1G79700 WRI4, WRINKLED 4 -0.301 -0.095
62 245816_at AT1G26210 ATSOFL1, SOB FIVE-LIKE 1, SOFL1, SOB five-like 1 -0.300 -0.481
63 245098_at AT2G40940 ERS, ETHYLENE RESPONSE SENSOR, ERS1, ethylene response sensor 1 -0.278 0.040
64 266078_at AT2G40670 ARR16, response regulator 16, RR16, response regulator 16 -0.269 -0.079
65 245166_at AT2G33170 [Leucine-rich repeat receptor-like protein kinase family protein] -0.268 0.195
66 258552_at AT3G07010 [Pectin lyase-like superfamily protein] -0.263 0.224
67 255575_at AT4G01430 UMAMIT29, Usually multiple acids move in and out Transporters 29 -0.260 0.123
68 245070_at AT2G23240 AtMT4b, Arabidopsis thaliana metallothionein 4b -0.252 -0.018
69 260856_at AT1G21910 DREB26, dehydration response element-binding protein 26 -0.248 -0.224
70 257203_at AT3G23730 XTH16, xyloglucan endotransglucosylase/hydrolase 16 -0.240 -0.320
71 252269_at AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 -0.239 0.276
72 250891_at AT5G04530 KCS19, 3-ketoacyl-CoA synthase 19 -0.237 0.068
73 251178_at AT3G63440 ATCKX6, CYTOKININ OXIDASE 6, ATCKX7, CKX6, cytokinin oxidase/dehydrogenase 6 -0.236 0.184
74 251144_at AT5G01210 [HXXXD-type acyl-transferase family protein] -0.232 0.056
75 254639_at AT4G18750 DOT4, DEFECTIVELY ORGANIZED TRIBUTARIES 4 -0.232 0.019
76 259579_at AT1G28010 ABCB14, ATP-binding cassette B14, ATABCB14, Arabidopsis thaliana ATP-binding cassette B14, MDR12, multi-drug resistance 12, PGP14, P-glycoprotein 14 -0.228 -0.558
77 259763_at AT1G77630 LYM3, lysin-motif (LysM) domain protein 3, LYP3, LysM-containing receptor protein 3 -0.228 -0.484
78 252989_at AT4G38420 sks9, SKU5 similar 9 -0.225 0.199
79 248104_at AT5G55250 AtIAMT1, IAMT1, IAA carboxylmethyltransferase 1 -0.222 -0.070
80 247085_at AT5G66310 [ATP binding microtubule motor family protein] -0.217 0.179
81 259845_at AT1G73590 ATPIN1, ARABIDOPSIS THALIANA PIN-FORMED 1, PIN1, PIN-FORMED 1 -0.211 0.017
82 260221_at AT1G74670 GASA6, GA-stimulated Arabidopsis 6 -0.208 0.035
83 262060_at AT1G80170 [Pectin lyase-like superfamily protein] -0.200 0.096
84 248841_at AT5G46740 UBP21, ubiquitin-specific protease 21 -0.199 0.266
85 257056_at AT3G15350 [Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein] -0.197 0.057
86 259982_at AT1G76410 ATL8 -0.195 0.046
87 262624_at AT1G06450 [Polynucleotidyl transferase, ribonuclease H-like superfamily protein] -0.192 0.089
88 246893_at AT5G25520 [SPOC domain / Transcription elongation factor S-II protein] -0.186 -0.011
89 253525_at AT4G31330 unknown -0.184 0.042
90 250424_at AT5G10550 GTE2, global transcription factor group E2 -0.183 0.119
91 263957_at AT2G35880 [TPX2 (targeting protein for Xklp2) protein family] -0.182 -0.156
92 247322_at AT5G64090 unknown -0.178 0.165
93 251326_at AT3G61590 HS, HWS, HAWAIIAN SKIRT -0.177 -0.120
94 263618_at AT2G04660 APC2, anaphase-promoting complex/cyclosome 2 -0.176 -0.008
95 258034_at AT3G21300 [RNA methyltransferase family protein] -0.176 0.054
96 259394_at AT1G06420 unknown -0.176 0.108
97 245343_at AT4G15830 [ARM repeat superfamily protein] -0.175 0.065
98 254343_at AT4G21990 APR3, APS reductase 3, ATAPR3, PRH-26, PRH26, PAPS REDUCTASE HOMOLOG 26 -0.173 0.104
99 246714_at AT5G28220 [Protein prenylyltransferase superfamily protein] -0.171 0.186
100 251788_at AT3G55420 unknown -0.170 0.074
101 265117_at AT1G62500 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.169 0.106
102 262785_at AT1G10750 unknown -0.167 0.048
103 260819_at AT1G06850 AtbZIP52, basic leucine-zipper 52, bZIP52, basic leucine-zipper 52 -0.167 0.060