4.0:Information of module
shoot control pKAT1
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009682 induced systemic resistance BP 5.001e-05
GO:0043255 regulation of carbohydrate biosynthetic ... BP 1.023e-04
GO:0043455 regulation of secondary metabolic proces... BP 1.903e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0044765 single-organism transport BP 2.546e-12
GO:1902578 single-organism localization BP 5.950e-12
GO:0051179 localization BP 3.301e-11
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
shoot control pKAT1		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 252650_at AT3G44690 unknown 1.455 0.046
2 250650_at AT5G06850 FTIP1, FT-interacting protein 1 1.086 0.091
3 267089_at AT2G38300 [myb-like HTH transcriptional regulator family protein] 1.049 0.017
4 260672_at AT1G19480 [DNA glycosylase superfamily protein] 0.969 -0.081
5 259423_at AT1G13880 [ELM2 domain-containing protein] 0.938 0.192
6 254870_at AT4G11900 [S-locus lectin protein kinase family protein] 0.824 -0.123
7 263210_at AT1G10585 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.818 0.135
8 245385_at AT4G14020 [Rapid alkalinization factor (RALF) family protein] 0.795 0.010
9 246653_at AT5G35200 [ENTH/ANTH/VHS superfamily protein] 0.782 0.037
10 254188_at AT4G23920 ATUGE2, UDP-GLC 4-EPIMERASE 2, UGE2, UDP-D-glucose/UDP-D-galactose 4-epimerase 2 0.769 0.011
11 249843_at AT5G23570 ATSGS3, SUPPRESSOR OF GENE SILENCING 3, SGS3, SUPPRESSOR OF GENE SILENCING 3 0.764 0.039
12 247668_at AT5G60100 APRR3, pseudo-response regulator 3, PRR3, pseudo-response regulator 3 0.726 0.118
13 259756_at AT1G71080 [RNA polymerase II transcription elongation factor] 0.724 -0.224
14 262680_at AT1G75880 [SGNH hydrolase-type esterase superfamily protein] 0.686 -0.132
15 256626_at AT3G20015 [Eukaryotic aspartyl protease family protein] 0.674 -0.041
16 251454_at AT3G60080 [RING/U-box superfamily protein] 0.668 0.191
17 262516_at AT1G17190 ATGSTU26, glutathione S-transferase tau 26, GSTU26, glutathione S-transferase tau 26 0.665 0.116
18 250660_at AT5G07060 MAC5C, MOS4-associated complex subunit 5C 0.665 0.090
19 264947_at AT1G77020 [DNAJ heat shock N-terminal domain-containing protein] 0.664 -0.216
20 247041_at AT5G67180 TOE3, target of early activation tagged (EAT) 3 0.651 -0.146
21 260353_at AT1G69230 SP1L2, SPIRAL1-like2 0.648 0.139
22 262113_at AT1G02820 AtLEA3, LEA3, late embryogenesis abundant 3 0.640 -0.026
23 251013_at AT5G02540 [NAD(P)-binding Rossmann-fold superfamily protein] 0.638 0.510
24 262671_at AT1G76040 CPK29, calcium-dependent protein kinase 29 0.633 -0.157
25 247667_at AT5G60150 unknown 0.630 0.035
26 257013_at AT3G26922 [F-box/RNI-like superfamily protein] 0.629 0.020
27 245616_at AT4G14480 [Protein kinase superfamily protein] 0.627 0.029
28 262880_at AT1G64880 [Ribosomal protein S5 family protein] 0.619 -0.076
29 256763_at AT3G16860 COBL8, COBRA-like protein 8 precursor 0.616 -0.018
30 261745_at AT1G08500 AtENODL18, ENODL18, early nodulin-like protein 18 0.609 0.177
31 261350_at AT1G79770 unknown 0.606 0.011
32 252536_at AT3G45700 [Major facilitator superfamily protein] 0.602 -0.038
33 257543_at AT3G28960 [Transmembrane amino acid transporter family protein] 0.598 -0.003
34 263830_at AT2G40260 [Homeodomain-like superfamily protein] 0.576 -0.039
35 261146_at AT1G19620 unknown 0.574 0.025
36 247971_at AT5G56730 [Insulinase (Peptidase family M16) protein] 0.569 0.268
37 265222_at AT2G01970 [Endomembrane protein 70 protein family] 0.566 -0.125
38 263047_at AT2G17630 PSAT2, phosphoserine aminotransferase 2 0.555 -0.120
39 248431_at AT5G51470 [Auxin-responsive GH3 family protein] 0.555 -0.032
40 264437_at AT1G27510 EX2, EXECUTER 2 0.553 0.034
41 259514_at AT1G12480 CDI3, CARBON DIOXIDE INSENSITIVE 3, OZS1, OZONE-SENSITIVE 1, RCD3, RADICAL-INDUCED CELL DEATH 3, SLAC1, SLOW ANION CHANNEL-ASSOCIATED 1 0.547 0.044
42 257367_at AT2G25780 unknown 0.546 0.053
43 257421_at AT1G12030 unknown 0.538 0.108
44 263221_at AT1G30620 HSR8, HIGH SUGAR RESPONSE8, MUR4, MURUS 4, UXE1, UDP-D-XYLOSE 4-EPIMERASE 1 0.531 0.026
45 266600_at AT2G46070 ATMPK12, MAPK12, MPK12, mitogen-activated protein kinase 12 0.531 -0.089
46 257247_at AT3G24140 FMA, FAMA 0.521 -0.028
47 260546_at AT2G43520 ATTI2, trypsin inhibitor protein 2, TI2, trypsin inhibitor protein 2 0.519 -0.150
48 261059_at AT1G01250 [Integrase-type DNA-binding superfamily protein] 0.514 -0.018
49 246860_at AT5G25840 unknown 0.511 0.124
50 264782_at AT1G08810 AtMYB60, myb domain protein 60, MYB60, myb domain protein 60 0.506 0.105
51 260997_at AT1G26610 [C2H2-like zinc finger protein] 0.500 0.172
52 248369_at AT5G52040 At-RS41, arginine/serine-rich splicing factor 41, ATRSP41, RS41, arginine/serine-rich splicing factor 41 0.496 0.090
53 261471_at AT1G14460 [AAA-type ATPase family protein] 0.494 0.054
54 261012_at AT1G26600 CLE9, CLAVATA3/ESR-RELATED 9 0.485 -0.008
55 267130_at AT2G23390 unknown 0.482 0.075
56 265596_at AT2G20020 ATCAF1, CAF1 0.478 0.185
57 260532_at AT2G47330 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.475 -0.027
58 263544_at AT2G21590 APL4 0.470 -0.093
59 266362_at AT2G32430 [Galactosyltransferase family protein] 0.467 -0.046
60 262459_at AT1G50400 [Eukaryotic porin family protein] 0.465 0.037
61 254468_at AT4G20460 [NAD(P)-binding Rossmann-fold superfamily protein] 0.455 -0.564
62 260921_at AT1G21540 [AMP-dependent synthetase and ligase family protein] 0.453 -0.143
63 246297_at AT3G51760 unknown 0.446 0.086
64 245946_at AT5G19580 [glyoxal oxidase-related protein] 0.446 0.252
65 254710_at AT4G18050 ABCB9, ATP-binding cassette B9, PGP9, P-glycoprotein 9 0.436 0.233
66 265002_at AT1G24400 AATL2, AMINO ACID TRANSPORTER-LIKE PROTEIN 2, ATLHT2, ARABIDOPSIS LYSINE HISTIDINE TRANSPORTER 2, LHT2, lysine histidine transporter 2 0.435 -0.080
67 262438_at AT1G47410 unknown 0.434 0.194
68 248627_at AT5G48950 DHNAT2, DHNA-CoA thioesterase 2 0.432 0.124
69 246034_at AT5G08350 [GRAM domain-containing protein / ABA-responsive protein-related] 0.429 -0.209
70 257226_at AT3G27880 unknown 0.428 0.065
71 252989_at AT4G38420 sks9, SKU5 similar 9 0.427 0.091
72 258017_at AT3G19370 unknown 0.425 -0.011
73 250359_at AT5G11350 [DNAse I-like superfamily protein] 0.424 0.066
74 256757_at AT3G25620 ABCG21, ATP-binding cassette G21 0.423 0.018
75 266254_at AT2G27810 ATNAT12, ARABIDOPSIS NUCLEOBASE-ASCORBATE TRANSPORTER 12, NAT12, nucleobase-ascorbate transporter 12 0.416 -0.024
76 250529_at AT5G08610 PDE340, PIGMENT DEFECTIVE 340 0.414 -0.188
77 258679_at AT3G08590 iPGAM2, 2,3-biphosphoglycerate-independent phosphoglycerate mutase 2 0.410 -0.104
78 254697_at AT4G17970 ALMT12, aluminum-activated, malate transporter 12, ATALMT12, QUAC1, quick-activating anion channel 1 0.410 -0.265
79 250598_at AT5G07690 ATMYB29, myb domain protein 29, MYB29, myb domain protein 29, PMG2, PRODUCTION OF METHIONINE-DERIVED GLUCOSINOLATE 2 0.409 0.436
80 251791_at AT3G55500 ATEXP16, ATEXPA16, expansin A16, ATHEXP ALPHA 1.7, EXP16, EXPANSIN 16, EXPA16, expansin A16 0.406 0.055
81 256354_at AT1G54870 [NAD(P)-binding Rossmann-fold superfamily protein] -0.596 0.015
82 256338_at AT1G72100 [late embryogenesis abundant domain-containing protein / LEA domain-containing protein] -0.524 0.008
83 256751_at AT3G27170 ATCLC-B, CLC-B, chloride channel B -0.433 0.017
84 267605_at AT2G32920 ATPDI9, ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 9, ATPDIL2-3, PDI-like 2-3, PDI9, PROTEIN DISULFIDE ISOMERASE 9, PDIL2-3, PDI-like 2-3 -0.419 0.017
85 265246_at AT2G43050 ATPMEPCRD -0.403 -0.044
86 256940_at AT3G30720 QQS, QUA-QUINE STARCH -0.395 -0.031
87 256057_at AT1G07180 ATNDI1, ARABIDOPSIS THALIANA INTERNAL NON-PHOSPHORYLATING NAD ( P ) H DEHYDROGENASE, NDA1, alternative NAD(P)H dehydrogenase 1 -0.375 0.150
88 259561_at AT1G21250 AtWAK1, PRO25, WAK1, cell wall-associated kinase 1 -0.374 0.296
89 258347_at AT3G17520 [Late embryogenesis abundant protein (LEA) family protein] -0.368 -0.117
90 255905_at AT1G17810 BETA-TIP, beta-tonoplast intrinsic protein -0.356 0.139
91 266143_at AT2G38905 [Low temperature and salt responsive protein family] -0.356 -0.065
92 266743_at AT2G02990 ATRNS1, RIBONUCLEASE 1, RNS1, ribonuclease 1 -0.348 -0.038
93 256814_at AT3G21370 BGLU19, beta glucosidase 19 -0.348 -0.098
94 264612_at AT1G04560 [AWPM-19-like family protein] -0.328 -0.014
95 247297_at AT5G64100 [Peroxidase superfamily protein] -0.324 -0.237
96 246445_at AT5G17630 [Nucleotide/sugar transporter family protein] -0.323 -0.099
97 259297_at AT3G05360 AtRLP30, receptor like protein 30, RLP30, receptor like protein 30 -0.320 0.156
98 257994_at AT3G19920 unknown -0.318 0.188
99 249082_at AT5G44120 ATCRA1, CRUCIFERINA, CRA1, CRUCIFERINA, CRU1 -0.313 0.079
100 258850_at AT3G03050 ATCSLD3, CELLULOSE SYNTHASE LIKE D3, CSLD3, cellulose synthase-like D3, KJK, KOJAK, RHD7, ROOT HAIR DEFECTIVE 7 -0.312 0.136
101 256099_at AT1G13710 CYP78A5, cytochrome P450, family 78, subfamily A, polypeptide 5, KLU, KLUH -0.309 -0.100
102 246143_at AT5G19980 GONST4, golgi nucleotide sugar transporter 4 -0.308 -0.037
103 251248_at AT3G62150 ABCB21, ATP-binding cassette B21, PGP21, P-glycoprotein 21 -0.306 0.202
104 261936_at AT1G22600 [Late embryogenesis abundant protein (LEA) family protein] -0.306 -0.045
105 261191_at AT1G32900 GBSS1, granule bound starch synthase 1 -0.305 0.115
106 245070_at AT2G23240 AtMT4b, Arabidopsis thaliana metallothionein 4b -0.300 0.025
107 262504_at AT1G21750 ATPDI5, ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 5, ATPDIL1-1, PDI-like 1-1, PDI5, PROTEIN DISULFIDE ISOMERASE 5, PDIL1-1, PDI-like 1-1 -0.299 -0.076
108 259845_at AT1G73590 ATPIN1, ARABIDOPSIS THALIANA PIN-FORMED 1, PIN1, PIN-FORMED 1 -0.295 0.156
109 244967_at ATCG00630 PSAJ -0.294 0.315
110 265994_at AT2G24170 [Endomembrane protein 70 protein family] -0.294 0.330
111 267367_at AT2G44210 unknown -0.289 -0.042
112 261958_at AT1G64500 [Glutaredoxin family protein] -0.287 -0.082
113 245161_at AT2G33070 ATNSP2, NITRILE-SPECIFIER PROTEIN 2, NSP2, nitrile specifier protein 2 -0.282 -0.007
114 252377_at AT3G47960 AtNPF2.10, GTR1, GLUCOSINOLATE TRANSPORTER-1, NPF2.10, NRT1/ PTR family 2.10 -0.281 0.103
115 263145_at AT1G54090 ATEXO70D2, exocyst subunit exo70 family protein D2, EXO70D2, exocyst subunit exo70 family protein D2 -0.279 0.276
116 260170_at AT1G71890 ATSUC5, SUCROSE-PROTON SYMPORTER 5, SUC5 -0.278 0.167
117 250300_at AT5G11890 EMB3135, EMBRYO DEFECTIVE 3135 -0.277 0.023
118 263226_at AT1G30690 [Sec14p-like phosphatidylinositol transfer family protein] -0.269 0.017
119 264020_at AT2G21160 [Translocon-associated protein (TRAP), alpha subunit] -0.269 -0.017
120 247615_at AT5G60250 [zinc finger (C3HC4-type RING finger) family protein] -0.268 0.257
121 259856_at AT1G68440 unknown -0.267 0.039
122 249346_at AT5G40780 LHT1, lysine histidine transporter 1 -0.267 0.252
123 251495_at AT3G59020 [ARM repeat superfamily protein] -0.264 0.012
124 257922_at AT3G23150 ETR2, ethylene response 2 -0.261 0.124
125 254860_at AT4G12110 ATSMO1-1, SMO1-1, sterol-4alpha-methyl oxidase 1-1 -0.257 0.158
126 258986_at AT3G08910 [DNAJ heat shock family protein] -0.255 -0.160
127 262978_at AT1G75780 TUB1, tubulin beta-1 chain -0.254 0.014
128 249452_at AT5G39500 ERMO1, ENDOPLASMIC RETICULUM MORPHOLOGY 1, GNL1, GNOM-like 1 -0.252 0.004
129 262730_at AT1G16390 ATOCT3, organic cation/carnitine transporter 3, OCT3, organic cation/carnitine transporter 3 -0.252 0.039
130 260914_at AT1G02640 ATBXL2, BETA-XYLOSIDASE 2, BXL2, beta-xylosidase 2 -0.250 0.128
131 245991_at AT5G20660 [Zn-dependent exopeptidases superfamily protein] -0.249 0.050
132 259846_at AT1G72140 [Major facilitator superfamily protein] -0.249 -0.063
133 247648_at AT5G60020 ATLAC17, LAC17, laccase 17 -0.248 -0.028
134 254873_at AT4G11420 ATEIF3A-1, ATTIF3A1, EIF3A, eukaryotic translation initiation factor 3A, EIF3A-1, TIF3A1 -0.248 0.175
135 258773_at AT3G10730 ATSUN2, ARABIDOPSIS SAD1/UNC-84 DOMAIN PROTEIN 2, SUN2, SAD1/UNC-84 domain protein 2 -0.247 -0.083
136 267128_at AT2G23620 ATMES1, ARABIDOPSIS THALIANA METHYL ESTERASE 1, MES1, methyl esterase 1 -0.247 -0.105
137 258421_at AT3G16690 AtSWEET16, SWEET16 -0.244 -0.046
138 262124_at AT1G59660 [Nucleoporin autopeptidase] -0.244 -0.097
139 251428_at AT3G60140 BGLU30, BETA GLUCOSIDASE 30, DIN2, DARK INDUCIBLE 2, SRG2, SENESCENCE-RELATED GENE 2 -0.243 -0.109
140 263219_at AT1G30600 [Subtilase family protein] -0.241 0.103
141 261574_at AT1G01190 CYP78A8, cytochrome P450, family 78, subfamily A, polypeptide 8 -0.238 0.027
142 247603_at AT5G60930 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.238 -0.058
143 249947_at AT5G19200 TSC10B, TSC10B -0.238 -0.248
144 254818_at AT4G12470 AZI1, azelaic acid induced 1 -0.236 0.072
145 248269_at AT5G53470 ACBP, ACYL-COA BINDING PROTEIN, ACBP1, acyl-CoA binding protein 1, AtACBP1 -0.234 -0.076
146 265626_at AT2G27260 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] -0.232 0.026
147 248074_at AT5G55730 FLA1, FASCICLIN-like arabinogalactan 1 -0.232 -0.146
148 267580_at AT2G41990 unknown -0.230 0.013
149 261405_at AT1G18740 unknown -0.230 0.036
150 250780_at AT5G05290 ATEXP2, ATEXPA2, expansin A2, ATHEXP ALPHA 1.12, EXP2, EXPANSIN 2, EXPA2, expansin A2 -0.228 -0.148
151 264606_at AT1G04660 [glycine-rich protein] -0.228 -0.088
152 253133_at AT4G35800 NRPB1, RNA polymerase II large subunit, RNA_POL_II_LS, RNA POLYMERASE II LARGE SUBUNIT, RNA_POL_II_LSRNA_POL_II_LS, RPB1, RNA POLYMERASE II LARGE SUBUNIT -0.226 0.020
153 257808_at AT3G26935 [DHHC-type zinc finger family protein] -0.225 -0.025
154 259272_at AT3G01290 AtHIR2, HIR2, hypersensitive induced reaction 2 -0.223 -0.156
155 250045_at AT5G17700 [MATE efflux family protein] -0.223 -0.017
156 245939_at AT5G19760 [Mitochondrial substrate carrier family protein] -0.222 0.000
157 266140_at AT2G28120 [Major facilitator superfamily protein] -0.221 0.068
158 245088_at AT2G39850 [Subtilisin-like serine endopeptidase family protein] -0.221 0.213
159 261569_at AT1G01060 LHY, LATE ELONGATED HYPOCOTYL, LHY1, LATE ELONGATED HYPOCOTYL 1 -0.220 -0.072