4.0:Information of module
roottip hypoxia total
In comparison with root epidermis and lateral root cap 40 mM NaCl help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010033 response to organic substance BP 4.886e-21
GO:1901700 response to oxygen-containing compound BP 2.019e-18
GO:0071229 cellular response to acid chemical BP 6.856e-18
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010015 root morphogenesis BP 2.699e-17
GO:0010054 trichoblast differentiation BP 1.190e-16
GO:0010053 root epidermal cell differentiation BP 3.197e-16
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
roottip hypoxia total		 Log2 signal ratio
root epidermis and lateral root cap 40 mM NaCl
1 250464_at AT5G10040 unknown 1.609 0.047
2 255807_at AT4G10270 [Wound-responsive family protein] 1.514 -0.103
3 260668_at AT1G19530 unknown 1.378 0.063
4 260869_at AT1G43800 FTM1, FLORAL TRANSITION AT THE MERISTEM1, SAD6, STEAROYL-ACYL CARRIER PROTEIN Δ9-DESATURASE6 1.214 0.066
5 254200_at AT4G24110 unknown 1.160 0.661
6 259879_at AT1G76650 CML38, calmodulin-like 38 1.128 0.309
7 253046_at AT4G37370 CYP81D8, cytochrome P450, family 81, subfamily D, polypeptide 8 1.105 0.484
8 264953_at AT1G77120 ADH, ALCOHOL DEHYDROGENASE, ADH1, alcohol dehydrogenase 1, ATADH, ARABIDOPSIS THALIANA ALCOHOL DEHYDROGENASE, ATADH1 1.070 0.623
9 258930_at AT3G10040 [sequence-specific DNA binding transcription factors] 1.047 0.073
10 247431_at AT5G62520 SRO5, similar to RCD one 5 1.027 0.329
11 245173_at AT2G47520 AtERF71, Arabidopsis thaliana ethylene response factor 71, ERF71, ethylene response factor 71, HRE2, HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 2 1.026 -0.022
12 249890_at AT5G22570 ATWRKY38, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 38, WRKY38, WRKY DNA-binding protein 38 0.968 0.713
13 257153_at AT3G27220 [Galactose oxidase/kelch repeat superfamily protein] 0.967 -0.021
14 247925_at AT5G57560 TCH4, Touch 4, XTH22, xyloglucan endotransglucosylase/hydrolase 22 0.960 0.303
15 257925_at AT3G23170 unknown 0.948 -0.063
16 258487_at AT3G02550 LBD41, LOB domain-containing protein 41 0.935 0.310
17 255568_at AT4G01250 AtWRKY22, WRKY22 0.932 0.009
18 263295_at AT2G14210 AGL44, AGAMOUS-like 44, ANR1, ARABIDOPSIS NITRATE REGULATED 1 0.887 -0.045
19 250152_at AT5G15120 unknown 0.852 -0.171
20 252746_at AT3G43190 ATSUS4, ARABIDOPSIS THALIANA SUCROSE SYNTHASE 4, SUS4, sucrose synthase 4 0.822 0.106
21 249575_at AT5G37670 [HSP20-like chaperones superfamily protein] 0.821 0.195
22 261475_at AT1G14550 [Peroxidase superfamily protein] 0.784 0.395
23 254300_at AT4G22780 ACR7, ACT domain repeat 7 0.784 0.229
24 261449_at AT1G21120 IGMT2, indole glucosinolate O-methyltransferase 2 0.759 0.502
25 245076_at AT2G23170 GH3.3 0.757 0.657
26 249015_at AT5G44730 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] 0.754 0.129
27 261567_at AT1G33055 unknown 0.754 0.046
28 263231_at AT1G05680 UGT74E2, Uridine diphosphate glycosyltransferase 74E2 0.736 0.104
29 245998_at AT5G20830 ASUS1, atsus1, SUS1, sucrose synthase 1 0.729 0.470
30 260451_at AT1G72360 AtERF73, ERF73, ethylene response factor 73, HRE1, HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 1 0.718 0.420
31 252882_at AT4G39675 unknown 0.712 -0.003
32 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 0.690 0.294
33 246854_at AT5G26200 [Mitochondrial substrate carrier family protein] 0.678 0.114
34 253722_at AT4G29190 AtC3H49, AtOZF2, Arabidopsis thaliana oxidation-related zinc finger 2, AtTZF3, OZF2, oxidation-related zinc finger 2, TZF3, tandem zinc finger 3 0.670 0.517
35 258377_at AT3G17690 ATCNGC19, CYCLIC NUCLEOTIDE-GATED CHANNEL 19, CNGC19, cyclic nucleotide gated channel 19 0.669 0.115
36 252131_at AT3G50930 BCS1, cytochrome BC1 synthesis 0.668 0.053
37 250781_at AT5G05410 DREB2, DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2, DREB2A, DRE-binding protein 2A 0.622 0.158
38 257922_at AT3G23150 ETR2, ethylene response 2 0.569 -0.069
39 261261_at AT1G26730 [EXS (ERD1/XPR1/SYG1) family protein] 0.566 0.186
40 248177_at AT5G54630 [zinc finger protein-related] 0.563 0.010
41 265501_at AT2G15490 UGT73B4, UDP-glycosyltransferase 73B4 0.556 0.185
42 258879_at AT3G03270 [Adenine nucleotide alpha hydrolases-like superfamily protein] 0.555 -0.045
43 264561_at AT1G55810 UKL3, uridine kinase-like 3 0.550 -0.073
44 249234_at AT5G42200 [RING/U-box superfamily protein] 0.548 0.123
45 263931_at AT2G36220 unknown 0.541 0.277
46 248448_at AT5G51190 [Integrase-type DNA-binding superfamily protein] 0.531 0.102
47 264788_at AT2G17880 DJC24, DNA J protein C24 0.524 0.124
48 259685_at AT1G63090 AtPP2-A11, phloem protein 2-A11, PP2-A11, phloem protein 2-A11 0.515 0.437
49 248138_at AT5G54960 PDC2, pyruvate decarboxylase-2 0.508 0.247
50 247868_at AT5G57620 AtMYB36, myb domain protein 36, MYB36, myb domain protein 36 0.498 -0.024
51 252046_at AT3G52460 [hydroxyproline-rich glycoprotein family protein] 0.497 -0.098
52 253404_at AT4G32840 PFK6, phosphofructokinase 6 0.496 -0.164
53 259681_at AT1G77760 GNR1, NIA1, nitrate reductase 1, NR1, NITRATE REDUCTASE 1 0.491 -0.116
54 265948_at AT2G19590 ACO1, ACC oxidase 1, ATACO1 0.486 0.210
55 266016_at AT2G18670 [RING/U-box superfamily protein] 0.484 0.207
56 247914_at AT5G57540 AtXTH13, XTH13, xyloglucan endotransglucosylase/hydrolase 13 -0.751 -0.595
57 254056_at AT4G25250 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.694 -0.388
58 258832_at AT3G07070 [Protein kinase superfamily protein] -0.652 -0.530
59 256138_at AT1G48670 [auxin-responsive GH3 family protein] -0.579 -0.006
60 259195_at AT3G01730 unknown -0.538 -0.228
61 253763_at AT4G28850 ATXTH26, XTH26, xyloglucan endotransglucosylase/hydrolase 26 -0.534 -0.255
62 261647_at AT1G27740 RSL4, root hair defective 6-like 4 -0.514 -0.416
63 261157_at AT1G34510 [Peroxidase superfamily protein] -0.513 0.063
64 255591_at AT4G01630 ATEXP17, EXPANSIN 17, ATEXPA17, expansin A17, ATHEXP ALPHA 1.13, EXPA17, expansin A17 -0.498 0.048
65 252607_at AT3G44990 AtXTH31, ATXTR8, XTH31, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31, XTR8, xyloglucan endo-transglycosylase-related 8 -0.496 0.066
66 263376_at AT2G20520 FLA6, FASCICLIN-like arabinogalactan 6 -0.479 -0.443
67 263932_at AT2G35990 LOG2, LONELY GUY 2 -0.455 0.013
68 249750_at AT5G24570 unknown -0.447 -0.117
69 261241_at AT1G32950 [Subtilase family protein] -0.438 -0.160
70 259982_at AT1G76410 ATL8 -0.430 0.234
71 265213_at AT1G05020 [ENTH/ANTH/VHS superfamily protein] -0.425 -0.075
72 264892_at AT1G23160 [Auxin-responsive GH3 family protein] -0.422 -0.044
73 260300_at AT1G80340 ATGA3OX2, ARABIDOPSIS THALIANA GIBBERELLIN-3-OXIDASE 2, GA3OX2, gibberellin 3-oxidase 2, GA4H -0.383 -0.023
74 252238_at AT3G49960 [Peroxidase superfamily protein] -0.368 -0.408
75 259525_at AT1G12560 ATEXP7, ATEXPA7, expansin A7, ATHEXP ALPHA 1.26, EXP7, EXPA7, expansin A7 -0.358 -0.277
76 247871_at AT5G57530 AtXTH12, XTH12, xyloglucan endotransglucosylase/hydrolase 12 -0.342 -0.554
77 265411_at AT2G16630 [Pollen Ole e 1 allergen and extensin family protein] -0.340 -0.081
78 255175_at AT4G07960 ATCSLC12, Cellulose-synthase-like C12, CSLC12, CELLULOSE-SYNTHASE LIKE C12, CSLC12, Cellulose-synthase-like C12 -0.338 -0.319
79 248183_at AT5G54040 [Cysteine/Histidine-rich C1 domain family protein] -0.337 -0.279
80 251436_at AT3G59900 ARGOS, AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE -0.337 0.398
81 257876_at AT3G17130 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.335 0.051
82 265844_at AT2G35620 FEI2, FEI 2 -0.334 -0.471
83 251272_at AT3G61890 ATHB-12, homeobox 12, ATHB12, ARABIDOPSIS THALIANA HOMEOBOX 12, HB-12, homeobox 12 -0.328 1.032
84 252594_at AT3G45680 [Major facilitator superfamily protein] -0.327 0.023
85 265039_at AT1G04000 unknown -0.326 0.026
86 253723_at AT4G29240 [Leucine-rich repeat (LRR) family protein] -0.323 -0.045
87 247498_at AT5G61810 APC1, ATP/phosphate carrier 1 -0.314 -0.009
88 267550_at AT2G32800 AP4.3A, LecRK-S.2, L-type lectin receptor kinase S.2 -0.313 0.165
89 254107_at AT4G25220 AtG3Pp2, glycerol-3-phosphate permease 2, G3Pp2, glycerol-3-phosphate permease 2, RHS15, root hair specific 15 -0.312 -0.096
90 249934_at AT5G22410 RHS18, root hair specific 18 -0.311 -0.414
91 257297_at AT3G28040 [Leucine-rich receptor-like protein kinase family protein] -0.310 -0.096
92 265102_at AT1G30870 [Peroxidase superfamily protein] -0.310 -0.161
93 260758_at AT1G48930 AtGH9C1, glycosyl hydrolase 9C1, GH9C1, glycosyl hydrolase 9C1 -0.310 -0.236
94 257131_at AT3G20240 [Mitochondrial substrate carrier family protein] -0.303 -0.186
95 262275_at AT1G68710 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] -0.295 -0.064
96 258967_at AT3G10470 [C2H2-type zinc finger family protein] -0.290 -0.314
97 259846_at AT1G72140 [Major facilitator superfamily protein] -0.288 0.085
98 253100_at AT4G37400 CYP81F3, cytochrome P450, family 81, subfamily F, polypeptide 3 -0.286 -0.068
99 251513_at AT3G59220 ATPIRIN1, PRN, pirin, PRN1 -0.285 -0.124
100 261587_at AT1G01660 [RING/U-box superfamily protein] -0.285 -0.043
101 256759_at AT3G25640 unknown -0.284 0.078
102 246991_at AT5G67400 RHS19, root hair specific 19 -0.282 -0.118
103 255516_at AT4G02270 RHS13, root hair specific 13 -0.279 -0.122
104 253734_at AT4G29180 RHS16, root hair specific 16 -0.265 -0.294
105 261758_at AT1G08250 ADT6, arogenate dehydratase 6, AtADT6, Arabidopsis thaliana arogenate dehydratase 6 -0.262 0.163
106 250744_at AT5G05840 unknown -0.260 -0.036
107 263236_at AT1G10470 ARR4, response regulator 4, ATRR1, RESPONCE REGULATOR 1, IBC7, INDUCED BY CYTOKININ 7, MEE7, maternal effect embryo arrest 7 -0.256 -0.150
108 266765_at AT2G46860 AtPPa3, pyrophosphorylase 3, PPa3, pyrophosphorylase 3 -0.250 -0.545
109 266336_at AT2G32270 ZIP3, zinc transporter 3 precursor -0.249 -0.369