4.0:Information of module
roottip hypoxia p35S
In comparison with bri1-116 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0051225 spindle assembly BP 3.729e-06
GO:0007051 spindle organization BP 6.739e-06
GO:0070925 organelle assembly BP 1.165e-05
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006810 transport BP 6.390e-05
GO:0051234 establishment of localization BP 1.328e-04
GO:1902578 single-organism localization BP 1.602e-04
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
roottip hypoxia p35S		 Log2 signal ratio
bri1-116
1 259727_at AT1G60950 ATFD2, FERREDOXIN 2, FD2, FED A 0.550 0.129
2 255716_at AT4G00330 CRCK2, calmodulin-binding receptor-like cytoplasmic kinase 2 0.487 -0.255
3 262984_at AT1G54460 [TPX2 (targeting protein for Xklp2) protein family] 0.476 -0.149
4 252206_at AT3G50360 ATCEN2, centrin2, CEN1, CENTRIN 1, CEN2, centrin2 0.453 0.015
5 247425_at AT5G62550 unknown 0.439 -0.095
6 254512_at AT4G20230 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] 0.433 -0.205
7 266309_at AT2G27140 [HSP20-like chaperones superfamily protein] 0.426 -0.099
8 247773_at AT5G58630 TRM31, TON1 Recruiting Motif 31 0.416 0.026
9 246071_at AT5G20150 ATSPX1, ARABIDOPSIS THALIANA SPX DOMAIN GENE 1, SPX1, SPX domain gene 1 0.415 -0.398
10 246498_at AT5G16230 [Plant stearoyl-acyl-carrier-protein desaturase family protein] 0.412 0.051
11 256872_at AT3G26490 [Phototropic-responsive NPH3 family protein] 0.410 0.014
12 261901_at AT1G80920 AtJ8, AtToc12, translocon at the outer envelope membrane of chloroplasts 12, DJC22, DNA J protein C22, J8, Toc12, translocon at the outer envelope membrane of chloroplasts 12 0.408 -0.019
13 257978_at AT3G20860 ATNEK5, NIMA-related kinase 5, NEK5, NIMA-related kinase 5 0.405 0.042
14 259832_at AT1G69580 [Homeodomain-like superfamily protein] 0.399 -0.070
15 246522_at AT5G15830 AtbZIP3, basic leucine-zipper 3, bZIP3, basic leucine-zipper 3 0.399 -0.161
16 253749_at AT4G29080 IAA27, indole-3-acetic acid inducible 27, PAP2, phytochrome-associated protein 2 0.397 0.177
17 264892_at AT1G23160 [Auxin-responsive GH3 family protein] 0.394 0.026
18 259982_at AT1G76410 ATL8 0.388 0.077
19 264119_at AT1G79180 ATMYB63, MYB DOMAIN PROTEIN 63, MYB63, myb domain protein 63 0.384 0.032
20 257642_at AT3G25710 ATAIG1, BHLH32, basic helix-loop-helix 32, TMO5, TARGET OF MONOPTEROS 5 0.379 -0.348
21 261052_at AT1G01440 unknown 0.373 -0.031
22 260332_at AT1G70470 unknown 0.370 -0.242
23 251049_at AT5G02430 [Transducin/WD40 repeat-like superfamily protein] 0.370 -0.028
24 260565_at AT2G43800 [Actin-binding FH2 (formin homology 2) family protein] 0.362 0.121
25 248865_at AT5G46790 PYL1, PYR1-like 1, RCAR12, regulatory components of ABA receptor 12 0.362 -0.084
26 258938_at AT3G10080 [RmlC-like cupins superfamily protein] 0.356 -0.060
27 247009_at AT5G67600 WIH1, WINDHOSE 1 0.351 -0.052
28 267012_at AT2G39220 PLA IIB, PLP6, PATATIN-like protein 6 0.337 0.099
29 254463_at AT4G20280 TAF11, TBP-associated factor 11 0.334 0.090
30 266845_at AT2G26110 unknown 0.327 0.046
31 263318_at AT2G24762 AtGDU4, glutamine dumper 4, GDU4, glutamine dumper 4 0.322 -0.030
32 264041_at AT2G03710 AGL3, AGAMOUS-like 3, SEP4, SEPALLATA 4 0.309 0.037
33 249922_at AT5G19140 AILP1, ATAILP1 0.309 -0.004
34 247794_at AT5G58670 ATPLC, ARABIDOPSIS THALIANA PHOSPHOLIPASE C, ATPLC1, phospholipase C1, PLC1, phospholipase C 1, PLC1, phospholipase C1 0.302 0.035
35 253131_at AT4G35550 ATWOX13, HB-4, WOX13, WUSCHEL related homeobox 13 0.299 0.137
36 249766_at AT5G24070 [Peroxidase superfamily protein] 0.293 0.033
37 266587_at AT2G14880 [SWIB/MDM2 domain superfamily protein] 0.291 0.238
38 255497_at AT4G02590 UNE12, unfertilized embryo sac 12 0.291 -0.065
39 265085_at AT1G03780 AtTPX2, TPX2, targeting protein for XKLP2 0.290 -0.055
40 255623_at AT4G01310 [Ribosomal L5P family protein] 0.280 0.158
41 261456_at AT1G21050 unknown 0.277 0.201
42 263219_at AT1G30600 [Subtilase family protein] 0.274 -0.071
43 245947_at AT5G19530 ACL5, ACAULIS 5 0.262 0.108
44 263942_at AT2G35860 FLA16, FASCICLIN-like arabinogalactan protein 16 precursor 0.259 -0.296
45 254226_at AT4G23690 AtDIR6, Arabidopsis thaliana dirigent protein 6, DIR6, dirigent protein 6 0.256 -0.231
46 252607_at AT3G44990 AtXTH31, ATXTR8, XTH31, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31, XTR8, xyloglucan endo-transglycosylase-related 8 0.256 -0.083
47 249441_at AT5G39730 [AIG2-like (avirulence induced gene) family protein] 0.255 -0.106
48 257054_at AT3G15353 ATMT3, MT3, metallothionein 3 0.255 0.164
49 252047_at AT3G52490 SMXL3, SMAX1-like 3 0.246 -0.112
50 264790_at AT2G17820 AHK1, ATHK1, histidine kinase 1, HK1, histidine kinase 1 0.246 0.054
51 257203_at AT3G23730 XTH16, xyloglucan endotransglucosylase/hydrolase 16 -0.528 0.307
52 247729_at AT5G59530 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.521 -0.271
53 252046_at AT3G52460 [hydroxyproline-rich glycoprotein family protein] -0.514 -0.261
54 261232_at AT1G20220 [Alba DNA/RNA-binding protein] -0.505 0.028
55 252238_at AT3G49960 [Peroxidase superfamily protein] -0.473 0.025
56 254836_at AT4G12330 CYP706A7, cytochrome P450, family 706, subfamily A, polypeptide 7 -0.468 -0.114
57 249934_at AT5G22410 RHS18, root hair specific 18 -0.462 0.028
58 247893_at AT5G57980 RPB5C, RNA polymerase II fifth largest subunit, C -0.454 0.005
59 261475_at AT1G14550 [Peroxidase superfamily protein] -0.430 -0.433
60 262616_at AT1G06620 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.410 -0.402
61 248511_at AT5G50375 CPI1, cyclopropyl isomerase -0.407 0.047
62 259852_at AT1G72280 AERO1, endoplasmic reticulum oxidoreductins 1, ERO1, endoplasmic reticulum oxidoreductins 1 -0.390 -0.025
63 251231_at AT3G62760 ATGSTF13 -0.356 -0.025
64 261099_at AT1G62980 ATEXP18, ATEXPA18, expansin A18, ATHEXP ALPHA 1.25, EXP18, EXPANSIN 18, EXPA18, expansin A18 -0.349 -0.021
65 267276_at AT2G30130 ASL5, LBD12, PCK1, PEACOCK 1 -0.349 0.042
66 253361_at AT4G33100 unknown -0.345 -0.031
67 249729_at AT5G24410 PGL4, 6-phosphogluconolactonase 4 -0.335 -0.013
68 265179_at AT1G23650 unknown -0.329 -0.089
69 246530_at AT5G15725 GLV9, GOLVEN 9 -0.325 0.002
70 259088_at AT3G04970 [DHHC-type zinc finger family protein] -0.321 -0.051
71 252430_at AT3G47470 CAB4, LHCA4, light-harvesting chlorophyll-protein complex I subunit A4 -0.318 0.167
72 245927_at AT5G24750 [UDP-Glycosyltransferase superfamily protein] -0.317 0.108
73 259351_at AT3G05150 [Major facilitator superfamily protein] -0.316 -0.252
74 264434_at AT1G10340 [Ankyrin repeat family protein] -0.314 -0.026
75 249889_at AT5G22540 unknown -0.313 -0.006
76 262605_at AT1G15170 [MATE efflux family protein] -0.313 0.053
77 245853_at AT5G13500 unknown -0.309 0.005
78 252591_at AT3G45600 TET3, tetraspanin3 -0.302 -0.062
79 264920_at AT1G60550 DHNS, ECHID, enoyl-CoA hydratase/isomerase D -0.297 0.251
80 252879_at AT4G39390 ATNST-KT1, A. THALIANA NUCLEOTIDE SUGAR TRANSPORTER-KT 1, NST-K1, nucleotide sugar transporter-KT 1 -0.286 -0.122
81 251183_at AT3G62630 unknown -0.282 0.114
82 255432_at AT4G03330 ATSYP123, SYP123, syntaxin of plants 123 -0.276 -0.378
83 255793_at AT2G33250 unknown -0.275 0.170
84 245308_at AT4G17486 [PPPDE putative thiol peptidase family protein] -0.274 0.129
85 257480_at AT1G15640 unknown -0.268 -0.136
86 246793_at AT5G27210 Cand8, candidate G-protein Coupled Receptor 8 -0.266 0.045
87 260628_at AT1G62320 [ERD (early-responsive to dehydration stress) family protein] -0.266 0.029
88 261618_at AT1G33110 [MATE efflux family protein] -0.262 -0.072
89 258064_at AT3G14680 CYP72A14, cytochrome P450, family 72, subfamily A, polypeptide 14 -0.259 -0.103
90 246988_at AT5G67340 [ARM repeat superfamily protein] -0.257 -0.071
91 262795_at AT1G13130 [Cellulase (glycosyl hydrolase family 5) protein] -0.256 -0.168
92 263854_at AT2G04430 atnudt5, nudix hydrolase homolog 5, NUDT5, nudix hydrolase homolog 5 -0.254 -0.041
93 264238_at AT1G54740 unknown -0.253 0.277
94 257999_at AT3G27540 [beta-1,4-N-acetylglucosaminyltransferase family protein] -0.250 0.040
95 250800_at AT5G05370 [Cytochrome b-c1 complex, subunit 8 protein] -0.248 -0.032
96 249779_at AT5G24230 [Lipase class 3-related protein] -0.247 0.030
97 265671_at AT2G32060 [Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein] -0.247 0.096
98 253401_at AT4G32870 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.241 -0.233
99 249092_at AT5G43710 [Glycosyl hydrolase family 47 protein] -0.238 -0.046