4.0:Information of module
roottip control pSHR
In comparison with Shoot apex inflorescence (after bolting) help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0030036 actin cytoskeleton organization BP 3.765e-05
GO:0048827 phyllome development BP 7.475e-05
GO:0030029 actin filament-based process BP 8.055e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006914 autophagy BP 4.016e-04
GO:0009853 photorespiration BP 1.258e-03
GO:0043094 cellular metabolic compound salvage BP 3.173e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
roottip control pSHR		 Log2 signal ratio
Shoot apex inflorescence (after bolting)
1 260565_at AT2G43800 [Actin-binding FH2 (formin homology 2) family protein] 0.879 0.887
2 253011_at AT4G37890 EDA40, embryo sac development arrest 40 0.657 -0.713
3 251229_at AT3G62740 BGLU7, beta glucosidase 7 0.650 -0.951
4 261399_at AT1G79620 [Leucine-rich repeat protein kinase family protein] 0.641 -1.210
5 259832_at AT1G69580 [Homeodomain-like superfamily protein] 0.523 -0.216
6 262880_at AT1G64880 [Ribosomal protein S5 family protein] 0.500 0.590
7 266368_at AT2G41380 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.475 0.105
8 246653_at AT5G35200 [ENTH/ANTH/VHS superfamily protein] 0.457 0.852
9 254863_at AT4G11980 ATNUDT14, ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 14, ATNUDX14, nudix hydrolase homolog 14, NUDX14, nudix hydrolase homolog 14 0.432 -0.050
10 255873_at AT2G30340 LBD13, LOB domain-containing protein 13 0.415 -1.078
11 263490_at AT2G42620 MAX2, MORE AXILLARY BRANCHES 2, ORE9, ORESARA 9, PPS, PLEIOTROPIC PHOTOSIGNALING 0.409 0.056
12 245702_at AT5G04220 ATSYTC, NTMC2T1.3, NTMC2TYPE1.3, SYT3, synaptotagmin 3, SYTC 0.399 -0.560
13 262671_at AT1G76040 CPK29, calcium-dependent protein kinase 29 0.398 -1.328
14 253614_at AT4G30350 SMXL2, SMAX1-like 2 0.387 0.291
15 267054_at AT2G38370 unknown 0.371 1.104
16 264054_at AT2G22540 AGL22, AGAMOUS-like 22, FAQ1, Flowering Arabidopsis QTL1, SVP, SHORT VEGETATIVE PHASE 0.361 -0.251
17 261382_at AT1G05470 CVP2, COTYLEDON VASCULAR PATTERN 2 0.335 -0.272
18 248821_at AT5G47070 [Protein kinase superfamily protein] 0.327 -0.226
19 257771_at AT3G23000 ATSR2, ATSRPK1, CIPK7, CBL-interacting protein kinase 7, PKS7, SnRK3.10, SNF1-RELATED PROTEIN KINASE 3.10 0.318 0.579
20 257592_at AT3G24982 ATRLP40, receptor like protein 40, RLP40, receptor like protein 40 0.316 -0.078
21 266838_at AT2G25980 [Mannose-binding lectin superfamily protein] 0.312 0.394
22 252488_at AT3G46700 [UDP-Glycosyltransferase superfamily protein] 0.310 -0.544
23 261063_at AT1G07520 [GRAS family transcription factor] 0.309 0.104
24 259666_at AT1G55310 At-SCL33, SC35-LIKE SPLICING FACTOR 33, ATSCL33, SC35-like splicing factor 33, SCL33, SC35-LIKE SPLICING FACTOR 33, SR33, SC35-like splicing factor 33 0.301 0.114
25 251076_at AT5G01970 unknown 0.301 -0.174
26 253516_at AT4G31360 [selenium binding] 0.294 1.215
27 266234_at AT2G02350 AtPP2-B9, Phloem protein 2-B9, SKIP3, SKP1 interacting partner 3 0.288 0.276
28 245584_at AT4G14940 AO1, amine oxidase 1, ATAO1, amine oxidase 1 0.287 -0.155
29 264663_at AT1G09970 LRR XI-23, RLK7, receptor-like kinase 7 0.277 -0.186
30 258983_at AT3G08860 PYD4, PYRIMIDINE 4 0.276 -0.722
31 264486_at AT1G77180 SKIP, SNW/Ski-interacting protein 0.272 0.500
32 253173_at AT4G35110 [Arabidopsis phospholipase-like protein (PEARLI 4) family] 0.269 -0.105
33 254817_at AT4G12460 ORP2B, OSBP(oxysterol binding protein)-related protein 2B 0.267 -0.885
34 253397_at AT4G32710 PERK14, proline-rich extensin-like receptor kinase 14 0.256 -0.097
35 246498_at AT5G16230 [Plant stearoyl-acyl-carrier-protein desaturase family protein] 0.256 -0.146
36 265060_at AT1G52150 ATHB-15, ATHB15, CNA, CORONA, ICU4, INCURVATA 4 0.253 0.397
37 250986_at AT5G02850 [hydroxyproline-rich glycoprotein family protein] 0.250 -0.037
38 252820_at AT3G42640 AHA8, H(+)-ATPase 8, HA8, H(+)-ATPase 8 0.248 -0.382
39 265817_at AT2G18050 HIS1-3, histone H1-3 0.247 -0.026
40 255790_at AT2G33560 BUBR1, BUB1-related (BUB1: budding uninhibited by benzymidazol 1) 0.239 -0.197
41 250095_at AT5G17230 PSY, PHYTOENE SYNTHASE 0.239 1.021
42 247240_at AT5G64660 ATCMPG2, CMPG2, CYS, MET, PRO, and GLY protein 2 0.239 -0.517
43 245568_at AT4G14650 unknown 0.235 -0.246
44 261553_at AT1G63420 unknown 0.232 0.894
45 250864_at AT5G03870 [Glutaredoxin family protein] 0.229 0.029
46 263305_at AT2G01930 ATBPC1, BASIC PENTACYSTEINE1, BBR, BPC1, basic pentacysteine1 -1.198 0.581
47 247070_at AT5G66815 unknown -0.913 -0.788
48 259481_at AT1G18970 GLP4, germin-like protein 4 -0.693 -0.813
49 249756_at AT5G24313 unknown -0.583 -1.317
50 247882_at AT5G57785 unknown -0.569 0.215
51 256563_at AT3G29780 RALFL27, ralf-like 27 -0.562 -0.490
52 249101_at AT5G43580 UPI, UNUSUAL SERINE PROTEASE INHIBITOR -0.549 -1.256
53 252882_at AT4G39675 unknown -0.529 0.084
54 257074_at AT3G19660 unknown -0.483 -0.782
55 266415_at AT2G38530 cdf3, cell growth defect factor-3, LP2, LTP2, lipid transfer protein 2 -0.481 1.177
56 256926_at AT3G22540 unknown -0.476 0.279
57 267084_at AT2G41180 SIB2, sigma factor binding protein 2 -0.476 0.270
58 253613_at AT4G30320 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.467 -0.330
59 266123_at AT2G45180 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.447 1.083
60 260005_at AT1G67920 unknown -0.432 -0.192
61 266168_at AT2G38870 [Serine protease inhibitor, potato inhibitor I-type family protein] -0.408 -0.055
62 265883_at AT2G42310 unknown -0.402 1.397
63 245172_at AT2G47540 [Pollen Ole e 1 allergen and extensin family protein] -0.402 -0.065
64 254313_at AT4G22460 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.398 -0.291
65 252502_at AT3G46900 COPT2, copper transporter 2 -0.394 -0.818
66 253482_at AT4G31985 [Ribosomal protein L39 family protein] -0.382 0.558
67 250108_at AT5G15150 ATHB-3, homeobox 3, ATHB3, HAT7, HOMEOBOX FROM ARABIDOPSIS THALIANA 7, HB-3, homeobox 3 -0.368 -0.067
68 250922_at AT5G03345 unknown -0.347 1.445
69 254774_at AT4G13440 [Calcium-binding EF-hand family protein] -0.341 -0.847
70 262536_at AT1G17100 AtHBP1, HBP1, haem-binding protein 1 -0.335 1.322
71 246394_at AT1G58160 JAX1, JACALIN-TYPE LECTIN REQUIRED FOR POTEXVIRUS RESISTANCE 1 -0.327 -1.182
72 266259_at AT2G27830 unknown -0.324 -0.063
73 254326_at AT4G22610 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.323 -0.965
74 248208_at AT5G53980 ATHB52, homeobox protein 52, HB52, homeobox protein 52 -0.321 -0.409
75 259592_at AT1G27950 LTPG1, glycosylphosphatidylinositol-anchored lipid protein transfer 1 -0.297 0.982
76 253291_at AT4G33865 [Ribosomal protein S14p/S29e family protein] -0.286 0.724
77 261790_at AT1G16000 unknown -0.284 1.028
78 251446_at AT3G59840 unknown -0.284 0.307
79 267451_at AT2G33710 [Integrase-type DNA-binding superfamily protein] -0.283 -1.236
80 252879_at AT4G39390 ATNST-KT1, A. THALIANA NUCLEOTIDE SUGAR TRANSPORTER-KT 1, NST-K1, nucleotide sugar transporter-KT 1 -0.280 0.055
81 250097_at AT5G17280 unknown -0.278 -0.004
82 250553_at AT5G07960 unknown -0.277 0.492
83 265006_at AT1G61570 TIM13, translocase of the inner mitochondrial membrane 13 -0.276 0.534
84 258821_at AT3G07230 [wound-responsive protein-related] -0.269 1.012
85 251167_at AT3G63360 [defensin-related] -0.268 -0.466
86 260290_at AT1G80510 [Transmembrane amino acid transporter family protein] -0.267 0.109
87 262658_at AT1G14220 [Ribonuclease T2 family protein] -0.266 -0.764
88 253047_at AT4G37295 unknown -0.264 -0.701
89 266857_at AT2G26900 BASS2, bile acid:sodium symporter family protein 2 -0.263 0.679