4.0:Information of module
roottip control p35S
In comparison with 3.5h KNO3 Whole root help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0035266 meristem growth BP 3.548e-08
GO:0010075 regulation of meristem growth BP 2.045e-07
GO:1901659 glycosyl compound biosynthetic process BP 1.664e-06
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010054 trichoblast differentiation BP 7.821e-09
GO:0010053 root epidermal cell differentiation BP 1.381e-08
GO:0090627 plant epidermal cell differentiation BP 2.089e-08
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
roottip control p35S		 Log2 signal ratio
3.5h KNO3 Whole root
1 264947_at AT1G77020 [DNAJ heat shock N-terminal domain-containing protein] 0.657 -0.016
2 267127_at AT2G23610 ATMES3, ARABIDOPSIS THALIANA METHYL ESTERASE 3, MES3, methyl esterase 3 0.605 0.007
3 264605_at AT1G04550 BDL, BODENLOS, IAA12, indole-3-acetic acid inducible 12 0.582 0.049
4 255022_at AT4G10350 ANAC070, NAC domain containing protein 70, BRN2, BEARSKIN 2, NAC070, NAC domain containing protein 70 0.554 0.038
5 250650_at AT5G06850 FTIP1, FT-interacting protein 1 0.508 0.080
6 255265_at AT4G05190 ATK5, kinesin 5 0.489 0.075
7 248732_at AT5G48070 ATXTH20, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 20, XTH20, xyloglucan endotransglucosylase/hydrolase 20 0.487 -0.011
8 255876_at AT2G40480 unknown 0.481 0.038
9 255410_at AT4G03100 [Rho GTPase activating protein with PAK-box/P21-Rho-binding domain] 0.476 0.033
10 258322_at AT3G22740 HMT3, homocysteine S-methyltransferase 3 0.459 0.080
11 267054_at AT2G38370 unknown 0.453 0.007
12 260034_at AT1G68810 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.451 0.037
13 261646_at AT1G27690 unknown 0.441 -0.009
14 260539_at AT2G43480 [Peroxidase superfamily protein] 0.437 0.068
15 260343_at AT1G69200 FLN2, fructokinase-like 2 0.426 -0.063
16 255823_at AT2G40470 ASL11, ASYMMETRIC LEAVES2-LIKE 11, LBD15, LOB domain-containing protein 15 0.416 -0.081
17 248670_at AT5G48740 [Leucine-rich repeat protein kinase family protein] 0.408 0.014
18 259832_at AT1G69580 [Homeodomain-like superfamily protein] 0.405 -0.045
19 252358_at AT3G48425 [DNAse I-like superfamily protein] 0.398 0.027
20 253749_at AT4G29080 IAA27, indole-3-acetic acid inducible 27, PAP2, phytochrome-associated protein 2 0.398 0.050
21 249866_at AT5G23010 IMS3, 2-ISOPROPYLMALATE SYNTHASE 3, MAM1, methylthioalkylmalate synthase 1 0.382 0.009
22 260262_at AT1G68470 [Exostosin family protein] 0.381 -0.024
23 247441_at AT5G62710 [Leucine-rich repeat protein kinase family protein] 0.381 0.047
24 251806_at AT3G55370 OBP3, OBF-binding protein 3 0.379 0.053
25 262228_at AT1G68690 AtPERK9, proline-rich extensin-like receptor kinase 9, PERK9, proline-rich extensin-like receptor kinase 9 0.378 0.113
26 260793_at AT1G06190 RHON1, Rho-N 1 0.370 0.012
27 266362_at AT2G32430 [Galactosyltransferase family protein] 0.355 -0.042
28 267590_at AT2G39700 ATEXP4, ATEXPA4, expansin A4, ATHEXP ALPHA 1.6, EXPA4, expansin A4 0.353 -0.021
29 260672_at AT1G19480 [DNA glycosylase superfamily protein] 0.344 -0.033
30 261075_at AT1G07280 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.344 0.011
31 256960_at AT3G13510 unknown 0.336 0.025
32 264775_at AT1G22880 ATCEL5, ARABIDOPSIS THALIANA CELLULASE 5, ATGH9B4, ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B4, CEL5, cellulase 5 0.331 0.019
33 265060_at AT1G52150 ATHB-15, ATHB15, CNA, CORONA, ICU4, INCURVATA 4 0.329 0.091
34 251844_at AT3G54630 unknown 0.326 0.026
35 263365_at AT2G20550 [HSP40/DnaJ peptide-binding protein] 0.325 -0.023
36 254575_at AT4G19460 [UDP-Glycosyltransferase superfamily protein] 0.323 0.104
37 246653_at AT5G35200 [ENTH/ANTH/VHS superfamily protein] 0.317 0.048
38 255450_at AT4G02850 [phenazine biosynthesis PhzC/PhzF family protein] 0.316 -0.070
39 246498_at AT5G16230 [Plant stearoyl-acyl-carrier-protein desaturase family protein] 0.314 -0.046
40 252210_at AT3G50410 OBP1, OBF binding protein 1 0.313 -0.011
41 263438_at AT2G28660 [Chloroplast-targeted copper chaperone protein] 0.312 -0.020
42 267171_at AT2G37590 ATDOF2.4, DOF2.4, DNA binding with one finger 2.4 0.311 0.054
43 259945_at AT1G71460 [Pentatricopeptide repeat (PPR-like) superfamily protein] 0.308 0.062
44 255788_at AT2G33310 IAA13, auxin-induced protein 13 0.306 0.048
45 260223_at AT1G74390 [Polynucleotidyl transferase, ribonuclease H-like superfamily protein] 0.305 0.007
46 250661_at AT5G07030 [Eukaryotic aspartyl protease family protein] 0.304 0.041
47 261800_at AT1G30490 ATHB9, PHV, PHAVOLUTA 0.303 0.065
48 254188_at AT4G23920 ATUGE2, UDP-GLC 4-EPIMERASE 2, UGE2, UDP-D-glucose/UDP-D-galactose 4-epimerase 2 0.299 0.066
49 247794_at AT5G58670 ATPLC, ARABIDOPSIS THALIANA PHOSPHOLIPASE C, ATPLC1, phospholipase C1, PLC1, phospholipase C 1, PLC1, phospholipase C1 0.296 0.077
50 248549_at AT5G50310 [Galactose oxidase/kelch repeat superfamily protein] 0.295 0.070
51 252032_at AT3G52150 PSRP2, plastid-specific ribosomal protein 2 0.291 -0.036
52 255111_at AT4G08780 [Peroxidase superfamily protein] 0.290 -0.000
53 251110_at AT5G01260 [Carbohydrate-binding-like fold] 0.290 -0.054
54 255585_at AT4G01550 ANAC069, NAC domain containing protein 69, NAC069, NAC domain containing protein 69, NTM2, NAC with Transmembrane Motif 2 0.285 0.008
55 259017_at AT3G07310 unknown 0.284 -0.003
56 247855_at AT5G58210 [hydroxyproline-rich glycoprotein family protein] 0.284 0.055
57 258170_at AT3G21600 [Senescence/dehydration-associated protein-related] 0.283 0.078
58 258912_at AT3G06460 [GNS1/SUR4 membrane protein family] 0.283 -0.048
59 258643_at AT3G08010 ATAB2 0.282 -0.043
60 262921_at AT1G79430 APL, ALTERED PHLOEM DEVELOPMENT, WDY, WOODY 0.280 0.063
61 259166_at AT3G01670 AtSEOR2, Arabidopsis thaliana sieve element occlusion-related 2, SEOa, sieve element occlusion a, SEOR2, sieve element occlusion-related 2 0.279 0.057
62 261023_at AT1G12200 FMO, flavin monooxygenase 0.279 0.088
63 245568_at AT4G14650 unknown 0.279 0.091
64 262821_at AT1G11800 [endonuclease/exonuclease/phosphatase family protein] 0.277 -0.011
65 262181_at AT1G78060 [Glycosyl hydrolase family protein] 0.276 0.051
66 264055_at AT2G28590 [Protein kinase superfamily protein] 0.275 0.062
67 251897_at AT3G54360 NCA1, NO CATALASE ACTIVITY 1 0.275 -0.020
68 245607_at AT4G14330 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.275 -0.062
69 247773_at AT5G58630 TRM31, TON1 Recruiting Motif 31 0.269 -0.013
70 258286_at AT3G16060 [ATP binding microtubule motor family protein] 0.268 0.073
71 262880_at AT1G64880 [Ribosomal protein S5 family protein] 0.267 0.009
72 259210_at AT3G09150 ATHY2, ARABIDOPSIS ELONGATED HYPOCOTYL 2, GUN3, GENOMES UNCOUPLED 3, HY2, ELONGATED HYPOCOTYL 2 0.266 -0.007
73 267618_at AT2G26760 CYCB1;4, Cyclin B1;4 0.265 0.092
74 247337_at AT5G63660 LCR74, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 74, PDF2.5 -0.750 -0.054
75 245021_at ATCG00550 PSBJ, photosystem II reaction center protein J -0.691 -0.043
76 266066_at AT2G18800 ATXTH21, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 21, XTH21, xyloglucan endotransglucosylase/hydrolase 21 -0.680 -0.023
77 247893_at AT5G57980 RPB5C, RNA polymerase II fifth largest subunit, C -0.645 -0.122
78 251231_at AT3G62760 ATGSTF13 -0.603 -0.036
79 258623_at AT3G02790 MBS1, METHYLENE BLUE SENSITIVITY 1 -0.577 -0.116
80 260005_at AT1G67920 unknown -0.576 -0.082
81 260077_at AT1G73620 [Pathogenesis-related thaumatin superfamily protein] -0.575 -0.045
82 260883_at AT1G29270 unknown -0.570 -0.075
83 250620_at AT5G07190 ATS3, seed gene 3 -0.567 -0.096
84 261647_at AT1G27740 RSL4, root hair defective 6-like 4 -0.557 -0.042
85 266613_at AT2G14900 [Gibberellin-regulated family protein] -0.556 -0.081
86 257074_at AT3G19660 unknown -0.523 -0.124
87 253613_at AT4G30320 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.509 -0.110
88 247882_at AT5G57785 unknown -0.507 -0.315
89 259195_at AT3G01730 unknown -0.506 -0.026
90 265451_at AT2G46490 unknown -0.494 -0.065
91 263373_at AT2G20515 unknown -0.482 -0.010
92 263585_at AT2G25210 [Ribosomal protein L39 family protein] -0.470 -0.045
93 250108_at AT5G15150 ATHB-3, homeobox 3, ATHB3, HAT7, HOMEOBOX FROM ARABIDOPSIS THALIANA 7, HB-3, homeobox 3 -0.465 0.065
94 247006_at AT5G67490 unknown -0.454 -0.111
95 245523_at AT4G15910 ATDI21, drought-induced 21, DI21, drought-induced 21 -0.450 -0.107
96 249868_at AT5G23030 TET12, tetraspanin12 -0.449 0.012
97 260549_at AT2G43535 [Scorpion toxin-like knottin superfamily protein] -0.449 -0.111
98 266743_at AT2G02990 ATRNS1, RIBONUCLEASE 1, RNS1, ribonuclease 1 -0.441 0.014
99 254467_at AT4G20450 [Leucine-rich repeat protein kinase family protein] -0.435 0.124
100 254025_at AT4G25790 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.429 -0.046
101 265111_at AT1G62510 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.424 -0.212
102 245993_at AT5G20700 unknown -0.417 -0.006
103 253482_at AT4G31985 [Ribosomal protein L39 family protein] -0.414 -0.031
104 253100_at AT4G37400 CYP81F3, cytochrome P450, family 81, subfamily F, polypeptide 3 -0.413 0.017
105 259515_at AT1G20430 unknown -0.399 -0.091
106 250800_at AT5G05370 [Cytochrome b-c1 complex, subunit 8 protein] -0.389 -0.071
107 248972_at AT5G45010 ATDSS1(V), DSS1 homolog on chromosome V, DSS1(V), DSS1 homolog on chromosome V -0.389 -0.053
108 255074_at AT4G09100 [RING/U-box superfamily protein] -0.383 -0.077
109 262131_at AT1G02900 ATRALF1, RAPID ALKALINIZATION FACTOR 1, RALF1, rapid alkalinization factor 1, RALFL1, RALF-LIKE 1 -0.383 -0.027
110 264672_at AT1G09750 [Eukaryotic aspartyl protease family protein] -0.382 -0.067
111 266123_at AT2G45180 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.379 -0.057
112 257609_at AT3G13845 unknown -0.368 -0.109
113 246915_at AT5G25880 ATNADP-ME3, Arabidopsis thaliana NADP-malic enzyme 3, NADP-ME3, NADP-malic enzyme 3 -0.367 -0.000
114 262730_at AT1G16390 ATOCT3, organic cation/carnitine transporter 3, OCT3, organic cation/carnitine transporter 3 -0.365 0.010
115 245334_at AT4G15800 RALFL33, ralf-like 33 -0.364 -0.113
116 251255_at AT3G62280 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.363 -0.019
117 246103_at AT5G28640 AN3, ANGUSTIFOLIA 3, ATGIF1, ARABIDOPSIS GRF1-INTERACTING FACTOR 1, GIF, GRF1-INTERACTING FACTOR, GIF1, GRF1-INTERACTING FACTOR 1 -0.361 0.043
118 261587_at AT1G01660 [RING/U-box superfamily protein] -0.360 -0.027
119 262864_at AT1G64920 [UDP-Glycosyltransferase superfamily protein] -0.358 0.288
120 250018_at AT5G18150 [Methyltransferase-related protein] -0.353 -0.073
121 250204_at AT5G13990 ATEXO70C2, exocyst subunit exo70 family protein C2, EXO70C2, exocyst subunit exo70 family protein C2 -0.351 0.042
122 264685_at AT1G65610 ATGH9A2, ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A2, KOR2, KORRIGAN 2 -0.350 0.060
123 267409_at AT2G34910 unknown -0.347 -0.020
124 253582_at AT4G30670 [Putative membrane lipoprotein] -0.346 -0.021
125 260327_at AT1G63840 [RING/U-box superfamily protein] -0.342 -0.005
126 250323_at AT5G12880 [proline-rich family protein] -0.341 -0.086
127 266168_at AT2G38870 [Serine protease inhibitor, potato inhibitor I-type family protein] -0.341 -0.018
128 246745_at AT5G27770 [Ribosomal L22e protein family] -0.338 -0.014
129 264832_at AT1G03660 [Ankyrin-repeat containing protein] -0.332 -0.001
130 247487_at AT5G62150 [peptidoglycan-binding LysM domain-containing protein] -0.332 -0.105
131 253422_at AT4G32240 unknown -0.330 -0.076
132 255516_at AT4G02270 RHS13, root hair specific 13 -0.329 -0.072
133 250454_at AT5G09830 BolA2, homolog of E.coli BolA 2 -0.325 -0.093
134 262876_at AT1G64750 ATDSS1(I), deletion of SUV3 suppressor 1(I), DSS1(I), deletion of SUV3 suppressor 1(I) -0.324 -0.073
135 252833_at AT4G40090 AGP3, arabinogalactan protein 3 -0.323 -0.049
136 254889_at AT4G11650 ATOSM34, osmotin 34, OSM34, osmotin 34 -0.322 0.010
137 255538_at AT4G01680 AtMYB55, myb domain protein 55, MYB55, myb domain protein 55 -0.321 -0.048
138 251926_at AT3G53740 [Ribosomal protein L36e family protein] -0.321 -0.012
139 265183_at AT1G23750 [Nucleic acid-binding, OB-fold-like protein] -0.319 -0.064
140 259351_at AT3G05150 [Major facilitator superfamily protein] -0.318 0.012
141 266797_at AT2G22840 AtGRF1, growth-regulating factor 1, GRF1, growth-regulating factor 1 -0.317 0.008
142 264580_at AT1G05340 unknown -0.314 -0.112
143 259592_at AT1G27950 LTPG1, glycosylphosphatidylinositol-anchored lipid protein transfer 1 -0.314 -0.038
144 263284_at AT2G36100 CASP1, Casparian strip membrane domain protein 1 -0.313 0.015
145 267191_at AT2G44110 ATMLO15, MILDEW RESISTANCE LOCUS O 15, MLO15, MILDEW RESISTANCE LOCUS O 15 -0.312 0.084