4.0:Information of module
rosette leaves lcr
In comparison with 35S-MIF1 light grown help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006865 amino acid transport BP 4.237e-22
GO:0006820 anion transport BP 7.464e-22
GO:0015711 organic anion transport BP 1.190e-21
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0019684 photosynthesis, light reaction BP 3.012e-09
GO:0006098 pentose-phosphate shunt BP 1.600e-08
GO:0051156 glucose 6-phosphate metabolic process BP 1.600e-08
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
rosette leaves lcr		 Log2 signal ratio
35S-MIF1 light grown
1 262128_at AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 1.249 0.593
2 264415_at AT1G43160 RAP2.6, related to AP2 6 1.089 0.139
3 253608_at AT4G30290 ATXTH19, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19, XTH19, xyloglucan endotransglucosylase/hydrolase 19 0.898 -0.078
4 254396_at AT4G21680 AtNPF7.2, NPF7.2, NRT1/ PTR family 7.2, NRT1.8, NITRATE TRANSPORTER 1.8 0.867 0.228
5 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] 0.853 0.605
6 248812_at AT5G47330 [alpha/beta-Hydrolases superfamily protein] 0.831 0.289
7 251065_at AT5G01870 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.800 0.100
8 250365_at AT5G11410 [Protein kinase superfamily protein] 0.774 0.223
9 267008_at AT2G39350 ABCG1, ATP-binding cassette G1 0.707 0.076
10 263210_at AT1G10585 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.702 0.250
11 258209_at AT3G14060 unknown 0.668 0.385
12 248611_at AT5G49520 ATWRKY48, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 48, WRKY48, WRKY DNA-binding protein 48 0.661 0.153
13 260203_at AT1G52890 ANAC019, NAC domain containing protein 19, NAC019, NAC domain containing protein 19 0.658 -0.042
14 254652_at AT4G18170 ATWRKY28, WRKY28, WRKY DNA-binding protein 28 0.646 0.090
15 253046_at AT4G37370 CYP81D8, cytochrome P450, family 81, subfamily D, polypeptide 8 0.637 -0.069
16 246831_at AT5G26340 ATSTP13, SUGAR TRANSPORT PROTEIN 13, MSS1, STP13, SUGAR TRANSPORT PROTEIN 13 0.624 0.017
17 255250_at AT4G05100 AtMYB74, myb domain protein 74, MYB74, myb domain protein 74 0.615 0.005
18 266246_at AT2G27690 CYP94C1, cytochrome P450, family 94, subfamily C, polypeptide 1 0.606 0.097
19 262887_at AT1G14780 [MAC/Perforin domain-containing protein] 0.603 0.272
20 247327_at AT5G64120 AtPRX71, PRX71, peroxidase 71 0.599 0.199
21 248218_at AT5G53710 unknown 0.598 -0.055
22 267168_at AT2G37770 AKR4C9, Aldo-keto reductase family 4 member C9, ChlAKR, Chloroplastic aldo-keto reductase 0.594 0.001
23 252984_at AT4G37990 ATCAD8, ARABIDOPSIS THALIANA CINNAMYL-ALCOHOL DEHYDROGENASE 8, CAD-B2, CINNAMYL-ALCOHOL DEHYDROGENASE B2, ELI3, ELICITOR-ACTIVATED GENE 3, ELI3-2, elicitor-activated gene 3-2 0.593 -0.085
24 264580_at AT1G05340 unknown 0.592 0.114
25 263231_at AT1G05680 UGT74E2, Uridine diphosphate glycosyltransferase 74E2 0.590 0.027
26 247013_at AT5G67480 ATBT4, BT4, BTB and TAZ domain protein 4 0.581 0.128
27 245325_at AT4G14130 XTH15, xyloglucan endotransglucosylase/hydrolase 15, XTR7, xyloglucan endotransglycosylase 7 0.572 0.034
28 250287_at AT5G13330 Rap2.6L, related to AP2 6l 0.564 0.425
29 264042_at AT2G03760 AtSOT1, AtSOT12, sulphotransferase 12, ATST1, ARABIDOPSIS THALIANA SULFOTRANSFERASE 1, AtSULT202A1, RAR047, SOT12, sulphotransferase 12, ST, ST1, SULFOTRANSFERASE 1, SULT202A1, sulfotransferase 202A1 0.563 0.078
30 252511_at AT3G46280 [protein kinase-related] 0.552 0.009
31 266901_at AT2G34600 JAZ7, jasmonate-zim-domain protein 7, TIFY5B 0.536 0.153
32 258252_at AT3G15720 [Pectin lyase-like superfamily protein] 0.527 0.008
33 254818_at AT4G12470 AZI1, azelaic acid induced 1 0.520 0.098
34 266800_at AT2G22880 [VQ motif-containing protein] 0.509 -0.028
35 248163_at AT5G54510 DFL1, DWARF IN LIGHT 1, GH3.6, Gretchen Hagen3.6 0.505 -0.137
36 261088_at AT1G07590 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.501 0.018
37 261410_at AT1G07610 MT1C, metallothionein 1C 0.499 0.042
38 253872_at AT4G27410 ANAC072, Arabidopsis NAC domain containing protein 72, RD26, RESPONSIVE TO DESICCATION 26 0.498 -0.025
39 267411_at AT2G34930 [disease resistance family protein / LRR family protein] 0.493 -0.014
40 252487_at AT3G46660 UGT76E12, UDP-glucosyl transferase 76E12 0.488 -0.018
41 259445_at AT1G02400 ATGA2OX4, Arabidopsis thaliana gibberellin 2-oxidase 4, ATGA2OX6, ARABIDOPSIS THALIANA GIBBERELLIN 2-OXIDASE 6, DTA1, DOWNSTREAM TARGET OF AGL15 1, GA2OX6, gibberellin 2-oxidase 6 0.485 -0.017
42 256933_at AT3G22600 LTPG5, glycosylphosphatidylinositol-anchored lipid protein transfer 5 0.468 -0.020
43 256114_at AT1G16850 unknown 0.467 -0.044
44 264960_at AT1G76930 ATEXT1, EXTENSIN 1, ATEXT4, extensin 4, EXT1, extensin 1, EXT4, extensin 4, ORG5, OBP3-RESPONSIVE GENE 5 0.464 0.501
45 247492_at AT5G61890 [Integrase-type DNA-binding superfamily protein] 0.463 -0.035
46 254314_at AT4G22470 [protease inhibitor/seed storage/lipid transfer protein (LTP) family protein] 0.461 0.317
47 250826_at AT5G05220 unknown 0.460 0.015
48 262947_at AT1G75750 GASA1, GAST1 protein homolog 1 0.458 0.020
49 249626_at AT5G37540 [Eukaryotic aspartyl protease family protein] 0.455 -0.074
50 250944_at AT5G03380 [Heavy metal transport/detoxification superfamily protein ] -0.428 0.089
51 266921_at AT2G45970 CYP86A8, cytochrome P450, family 86, subfamily A, polypeptide 8, LCR, LACERATA -0.421 -0.105
52 246535_at AT5G15900 TBL19, TRICHOME BIREFRINGENCE-LIKE 19 -0.356 -0.064
53 265698_at AT2G32160 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.350 -0.108
54 257254_at AT3G21950 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.344 -0.248
55 263480_at AT2G04032 ZIP7, zinc transporter 7 precursor -0.309 0.001
56 251826_at AT3G55110 ABCG18, ATP-binding cassette G18 -0.263 0.033
57 246272_at AT4G37150 ATMES9, ARABIDOPSIS THALIANA METHYL ESTERASE 9, MES9, methyl esterase 9 -0.256 0.074
58 246769_at AT5G27440 unknown -0.243 0.034
59 258932_at AT3G10150 ATPAP16, PAP16, purple acid phosphatase 16 -0.242 -0.063
60 267078_at AT2G40960 [Single-stranded nucleic acid binding R3H protein] -0.237 -0.089
61 246235_at AT4G36830 HOS3-1 -0.222 -0.022
62 251509_at AT3G59010 PME35, pectin methylesterase 35, PME61, pectin methylesterase 61 -0.220 -0.030
63 263073_at AT2G17500 [Auxin efflux carrier family protein] -0.217 0.035
64 266321_at AT2G46660 CYP78A6, cytochrome P450, family 78, subfamily A, polypeptide 6, EOD3, enhancer of da1-1 -0.216 -0.092
65 249134_at AT5G43150 unknown -0.215 -0.152
66 253518_at AT4G31400 AtCTF7, CTF7, CHROMOSOME TRANSMISSION FIDELITY 7, ECO1 -0.214 -0.036
67 250372_at AT5G11460 unknown -0.205 -0.018
68 249567_at AT5G38020 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.201 0.276
69 248078_at AT5G55780 [Cysteine/Histidine-rich C1 domain family protein] -0.197 -0.083
70 255450_at AT4G02850 [phenazine biosynthesis PhzC/PhzF family protein] -0.197 -0.067
71 267402_at AT2G26180 IQD6, IQ-domain 6 -0.197 -0.037
72 263042_at AT1G23340 unknown -0.197 -0.044
73 247118_at AT5G65890 ACR1, ACT domain repeat 1 -0.190 -0.156
74 248901_at AT5G46410 SSP4, SCP1-like small phosphatase 4 -0.189 0.014
75 259888_at AT1G76350 NLP5, NIN-like protein 5 -0.186 -0.044
76 261084_at AT1G07440 [NAD(P)-binding Rossmann-fold superfamily protein] -0.185 -0.080
77 258956_at AT3G01440 PnsL3, Photosynthetic NDH subcomplex L 3, PQL1, PsbQ-like 1, PQL2, PsbQ-like 2 -0.184 -0.120
78 262312_at AT1G70830 MLP28, MLP-like protein 28 -0.181 0.114
79 251733_at AT3G56240 CCH, copper chaperone -0.180 -0.190
80 252594_at AT3G45680 [Major facilitator superfamily protein] -0.180 -0.087
81 262907_at AT1G59720 CRR28, CHLORORESPIRATORY REDUCTION28 -0.179 -0.049
82 263887_at AT2G36980 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.176 -0.023
83 246624_at AT1G48910 YUC10, YUCCA 10 -0.173 -0.043
84 258561_at AT3G05960 ATSTP6, SUGAR TRANSPORTER 6, STP6, sugar transporter 6 -0.170 -0.051
85 264712_at AT1G09810 ECT11, evolutionarily conserved C-terminal region 11 -0.168 0.043
86 251968_at AT3G53100 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.167 -0.199
87 257459_at AT1G24040 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] -0.166 0.067
88 265838_at AT2G14550 [pseudogene] -0.165 -0.018
89 254153_at AT4G24450 ATGWD2, GWD3, PWD, phosphoglucan, water dikinase -0.165 -0.213
90 245147_at AT2G45280 ATRAD51C, RAS associated with diabetes protein 51C, RAD51C, RAS associated with diabetes protein 51C -0.160 0.042
91 257528_at AT3G02125 unknown -0.159 -0.015
92 251870_at AT3G54510 [Early-responsive to dehydration stress protein (ERD4)] -0.158 -0.060
93 248494_at AT5G50770 AtHSD6, hydroxysteroid dehydrogenase 6, HSD6, hydroxysteroid dehydrogenase 6 -0.156 -0.066
94 256646_at AT3G13590 [Cysteine/Histidine-rich C1 domain family protein] -0.154 -0.064
95 246023_at AT5G21120 EIL2, ETHYLENE-INSENSITIVE3-like 2 -0.154 -0.032
96 261200_at AT1G12960 [Ribosomal protein L18e/L15 superfamily protein] -0.154 -0.008
97 247243_at AT5G64700 UMAMIT21, Usually multiple acids move in and out Transporters 21 -0.153 -0.079