4.0:Information of module
Col laser microdissected 5 dpi
In comparison with Col0-PsmES4326-24hpi help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0034976 response to endoplasmic reticulum stress BP 9.968e-20
GO:0098542 defense response to other organism BP 1.609e-19
GO:0006950 response to stress BP 2.999e-18
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0015979 photosynthesis BP 3.442e-27
GO:0006091 generation of precursor metabolites and ... BP 3.629e-23
GO:0019684 photosynthesis, light reaction BP 1.519e-21
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Col laser microdissected 5 dpi		 Log2 signal ratio
Col0-PsmES4326-24hpi
1 260116_at AT1G33960 AIG1, AVRRPT2-INDUCED GENE 1 1.001 0.585
2 245076_at AT2G23170 GH3.3 0.943 0.849
3 257061_at AT3G18250 [Putative membrane lipoprotein] 0.885 0.620
4 266292_at AT2G29350 SAG13, senescence-associated gene 13 0.869 0.716
5 253796_at AT4G28460 unknown 0.852 0.849
6 254215_at AT4G23700 ATCHX17, cation/H+ exchanger 17, CHX17, cation/H+ exchanger 17 0.834 1.028
7 248588_at AT5G49540 [Rab5-interacting family protein] 0.815 0.087
8 263181_at AT1G05720 [selenoprotein family protein] 0.802 0.104
9 250398_at AT5G11000 unknown 0.782 0.085
10 251422_at AT3G60540 [Preprotein translocase Sec, Sec61-beta subunit protein] 0.773 0.254
11 246098_at AT5G20400 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.766 0.224
12 262426_s_at AT1G47640 unknown 0.760 0.180
13 248321_at AT5G52740 [Copper transport protein family] 0.748 -0.284
14 246327_at AT1G16670 [Protein kinase superfamily protein] 0.723 0.270
15 254166_at AT4G24190 AtHsp90-7, HEAT SHOCK PROTEIN 90-7, AtHsp90.7, HEAT SHOCK PROTEIN 90.7, HSP90.7, HEAT SHOCK PROTEIN 90.7, SHD, SHEPHERD 0.719 0.066
16 250738_at AT5G05730 AMT1, A-METHYL TRYPTOPHAN RESISTANT 1, ASA1, anthranilate synthase alpha subunit 1, JDL1, JASMONATE-INDUCED DEFECTIVE LATERAL ROOT 1, TRP5, TRYPTOPHAN BIOSYNTHESIS 5, WEI2, WEAK ETHYLENE INSENSITIVE 2 0.710 0.483
17 256596_at AT3G28540 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.698 0.252
18 258140_at AT3G24503 ALDH1A, aldehyde dehydrogenase 1A, ALDH2C4, aldehyde dehydrogenase 2C4, REF1, REDUCED EPIDERMAL FLUORESCENCE1 0.675 0.264
19 266070_at AT2G18660 AtPNP-A, PNP-A, plant natriuretic peptide A 0.673 0.464
20 254429_at AT4G21105 [cytochrome-c oxidases] 0.662 0.154
21 263466_at AT2G31740 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.644 0.056
22 263046_at AT2G05380 GRP3S, glycine-rich protein 3 short isoform 0.634 0.069
23 264434_at AT1G10340 [Ankyrin repeat family protein] 0.628 0.304
24 254300_at AT4G22780 ACR7, ACT domain repeat 7 0.617 0.567
25 260724_at AT1G48140 DPMS3, dolichol phosphate mannose synthase 3 0.612 0.189
26 264399_at AT1G61780 [postsynaptic protein-related] 0.610 0.097
27 256256_at AT3G11230 [Yippee family putative zinc-binding protein] 0.605 0.537
28 257074_at AT3G19660 unknown 0.603 0.496
29 250301_at AT5G11970 unknown 0.594 0.312
30 257054_at AT3G15353 ATMT3, MT3, metallothionein 3 0.589 0.002
31 266167_at AT2G38860 DJ-1e, DJ1E, YLS5 0.588 0.305
32 264635_at AT1G65500 unknown 0.588 -0.182
33 253990_at AT4G26160 ACHT1, atypical CYS HIS rich thioredoxin 1 0.586 0.230
34 256301_at AT1G69510 [cAMP-regulated phosphoprotein 19-related protein] 0.582 0.040
35 245164_at AT2G33210 HSP60-2, heat shock protein 60-2 0.573 -0.270
36 249380_at AT5G40370 GRXC2, glutaredoxin C2 0.571 0.170
37 264362_at AT1G03290 unknown 0.568 0.300
38 264938_at AT1G60610 [SBP (S-ribonuclease binding protein) family protein] 0.557 0.360
39 254577_at AT4G19450 [Major facilitator superfamily protein] 0.555 0.124
40 266476_at AT2G31090 unknown 0.543 0.196
41 264657_at AT1G09100 RPT5B, 26S proteasome AAA-ATPase subunit RPT5B 0.519 0.520
42 265456_at AT2G46505 SDH4, succinate dehydrogenase subunit 4 0.503 0.147
43 253609_at AT4G30190 AHA2, H(+)-ATPase 2, HA2, H(+)-ATPase 2, PMA2, PLASMA MEMBRANE PROTON ATPASE 2 0.501 0.160
44 267567_at AT2G30770 CYP71A13, cytochrome P450, family 71, subfamily A, polypeptide 13 0.497 1.159
45 262837_at AT1G14830 ADL1C, DYNAMIN-like 1C, ADL5, ARABIDOPSIS DYNAMIN-LIKE PROTEIN 5, DL1C, DYNAMIN-like 1C, DRP1C, DYNAMIN RELATED PROTEIN 1C 0.494 0.006
46 254660_at AT4G18250 [receptor serine/threonine kinase, putative] 0.493 0.917
47 266317_at AT2G27030 ACAM-2, CAM5, calmodulin 5 0.490 0.059
48 252549_at AT3G45860 CRK4, cysteine-rich RLK (RECEPTOR-like protein kinase) 4 0.490 0.002
49 260579_at AT2G47380 [Cytochrome c oxidase subunit Vc family protein] 0.489 0.124
50 255816_at AT2G33470 ATGLTP1, ARABIDOPSIS GLYCOLIPID TRANSFER PROTEIN 1, GLTP1, glycolipid transfer protein 1 0.488 0.127
51 261486_at AT1G14510 AL7, alfin-like 7, AtAL7 0.486 0.084
52 253274_at AT4G34200 EDA9, embryo sac development arrest 9, PGDH1, phosphoglycerate dehydrogenase 1 0.485 0.376
53 248126_at AT5G54760 [Translation initiation factor SUI1 family protein] 0.481 0.128
54 263631_at AT2G04900 unknown 0.478 0.188
55 259008_at AT3G09390 ATMT-1, ARABIDOPSIS THALIANA METALLOTHIONEIN-1, ATMT-K, ARABIDOPSIS THALIANA METALLOTHIONEIN-K, MT2A, metallothionein 2A 0.478 0.166
56 263539_at AT2G24850 TAT, TYROSINE AMINOTRANSFERASE, TAT3, tyrosine aminotransferase 3 0.477 0.452
57 247532_at AT5G61560 [U-box domain-containing protein kinase family protein] 0.477 0.474
58 261955_at AT1G64520 RPN12a, regulatory particle non-ATPase 12A 0.468 0.231
59 248513_at AT5G50500 unknown 0.467 -0.021
60 250006_at AT5G18660 PCB2, PALE-GREEN AND CHLOROPHYLL B REDUCED 2 -0.888 -1.022
61 248683_at AT5G48490 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.861 -1.179
62 247593_at AT5G60790 ABCF1, ATP-binding cassette F1, ATGCN1, ARABIDOPSIS THALIANA GENERAL CONTROL NON-REPRESSIBLE 1, GCN1, GENERAL CONTROL NON-REPRESSIBLE 1 -0.673 0.151
63 254085_at AT4G24960 ATHVA22D, ARABIDOPSIS THALIANA HVA22 HOMOLOGUE D, HVA22D, HVA22 homologue D -0.664 0.015
64 254813_at AT4G12350 AtMYB42, myb domain protein 42, MYB42, myb domain protein 42 -0.642 0.019
65 254667_at AT4G18280 [glycine-rich cell wall protein-related] -0.615 0.017
66 258239_at AT3G27690 LHCB2, LIGHT-HARVESTING CHLOROPHYLL B-BINDING 2, LHCB2.3, photosystem II light harvesting complex gene 2.3, LHCB2.4 -0.601 -0.797
67 254772_at AT4G13390 EXT12, extensin 12 -0.511 0.016
68 263497_at AT2G42540 COR15, COR15A, cold-regulated 15a -0.498 0.052
69 253684_at AT4G29690 [Alkaline-phosphatase-like family protein] -0.491 0.028
70 258893_at AT3G05660 AtRLP33, receptor like protein 33, RLP33, receptor like protein 33 -0.485 0.100
71 247439_at AT5G62670 AHA11, H(+)-ATPase 11, HA11, H(+)-ATPase 11 -0.482 -0.513
72 264371_at AT1G12090 ELP, extensin-like protein -0.476 -1.087
73 260221_at AT1G74670 GASA6, GA-stimulated Arabidopsis 6 -0.468 -1.425
74 267631_at AT2G42150 [DNA-binding bromodomain-containing protein] -0.467 0.058
75 258181_at AT3G21670 AtNPF6.4, NPF6.4, NRT1/ PTR family 6.4 -0.456 0.054
76 253197_at AT4G35250 HCF244, high chlorophyll fluorescence phenotype 244 -0.450 -0.318
77 259431_at AT1G01620 PIP1;3, PLASMA MEMBRANE INTRINSIC PROTEIN 1;3, PIP1C, plasma membrane intrinsic protein 1C, TMP-B -0.434 -0.294
78 260982_at AT1G53520 AtFAP3, FAP3, fatty-acid-binding protein 3 -0.428 -0.723
79 251996_at AT3G52840 BGAL2, beta-galactosidase 2 -0.401 -0.328
80 262897_at AT1G59840 CCB4, cofactor assembly of complex C -0.395 -0.628
81 245743_at AT1G51080 unknown -0.383 -0.647
82 249522_at AT5G38700 unknown -0.382 0.029
83 260236_at AT1G74470 [Pyridine nucleotide-disulphide oxidoreductase family protein] -0.373 -0.325
84 247478_at AT5G62360 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.372 -0.151
85 251227_at AT3G62700 ABCC14, ATP-binding cassette C14, ATMRP10, multidrug resistance-associated protein 10, MRP10, multidrug resistance-associated protein 10 -0.370 -0.344
86 263678_at AT1G04420 [NAD(P)-linked oxidoreductase superfamily protein] -0.365 -0.452
87 258143_at AT3G18170 [Glycosyltransferase family 61 protein] -0.359 0.213
88 253971_at AT4G26530 AtFBA5, FBA5, fructose-bisphosphate aldolase 5 -0.355 -1.077
89 246919_at AT5G25460 DGR2, DUF642 L-GalL responsive gene 2 -0.352 -0.943
90 253835_at AT4G27820 BGLU9, beta glucosidase 9 -0.348 -0.138
91 264769_at AT1G61350 [ARM repeat superfamily protein] -0.347 -0.076
92 249766_at AT5G24070 [Peroxidase superfamily protein] -0.345 -0.010
93 253104_at AT4G36010 [Pathogenesis-related thaumatin superfamily protein] -0.333 0.309
94 259578_at AT1G27990 unknown -0.321 0.012
95 247845_at AT5G58090 [O-Glycosyl hydrolases family 17 protein] -0.321 -0.311
96 250304_at AT5G12110 [Glutathione S-transferase, C-terminal-like] -0.316 -0.378
97 250963_at AT5G03000 [Galactose oxidase/kelch repeat superfamily protein] -0.314 0.064
98 247376_at AT5G63310 ATNDPK2, ARABIDOPSIS NUCLEOSIDE DIPHOSPHATE KINASE 2, NDPK IA, NUCLEOSIDE DIPHOSPHATE KINASE IA, NDPK IA IA, NDPK1A, NDP KINASE 1A, NDPK2, nucleoside diphosphate kinase 2 -0.313 -0.540
99 265351_at AT2G22630 AGL17, AGAMOUS-like 17 -0.313 0.075
100 254274_at AT4G22770 AHL2, AT-hook motif nuclear localized protein 2 -0.308 0.194
101 252391_at AT3G47860 CHL, chloroplastic lipocalin -0.306 -0.327
102 252215_at AT3G50240 KICP-02 -0.305 -0.625
103 257003_at AT3G14110 FLU, FLUORESCENT IN BLUE LIGHT -0.299 -0.596
104 262569_at AT1G15180 [MATE efflux family protein] -0.299 -0.374
105 253943_at AT4G27030 FAD4, FATTY ACID DESATURASE 4, FADA, fatty acid desaturase A -0.295 -0.306
106 267635_at AT2G42220 [Rhodanese/Cell cycle control phosphatase superfamily protein] -0.294 -0.687
107 249875_at AT5G23120 HCF136, HIGH CHLOROPHYLL FLUORESCENCE 136 -0.294 -0.322
108 265768_at AT2G48020 [Major facilitator superfamily protein] -0.294 -0.018
109 247028_at AT5G67100 ICU2, INCURVATA2 -0.293 -0.091
110 251193_at AT3G62910 APG3, ALBINO AND PALE GREEN, AtcpRF1, Arabidopsis thaliana chloroplast RF1, cpRF1, chloroplast ribosome release factor 1 -0.292 -0.719
111 266509_at AT2G47940 DEG2, degradation of periplasmic proteins 2, DEGP2, DEGP protease 2, EMB3117, EMBRYO DEFECTIVE 3117 -0.292 -0.492
112 247891_at AT5G57960 [GTP-binding protein, HflX] -0.291 -0.119
113 251133_at AT5G01240 LAX1, like AUXIN RESISTANT 1 -0.288 -0.450
114 249361_at AT5G40540 [Protein kinase superfamily protein] -0.285 -0.168
115 262176_at AT1G74960 ATKAS2, ARABIDOPSIS BETA-KETOACYL-ACP SYNTHETASE 2, FAB1, fatty acid biosynthesis 1, KAS2, BETA-KETOACYL-ACP SYNTHETASE 2 -0.282 -0.186
116 246613_at AT5G35360 CAC2, acetyl Co-enzyme a carboxylase biotin carboxylase subunit -0.281 -0.315
117 259707_at AT1G77490 TAPX, thylakoidal ascorbate peroxidase -0.278 -0.291