4.0:Information of module
tfl1-1-16ºC
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009814 defense response, incompatible interacti... BP 6.904e-05
GO:0006886 intracellular protein transport BP 1.957e-04
GO:0034613 cellular protein localization BP 2.705e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0032259 methylation BP 7.950e-63
GO:0043414 macromolecule methylation BP 2.240e-62
GO:0001510 RNA methylation BP 6.223e-50
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
tfl1-1-16ºC		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 245038_at AT2G26560 PLA IIA, PHOSPHOLIPASE A 2A, PLA2A, phospholipase A 2A, PLAII alpha, PLP2, PATATIN-LIKE PROTEIN 2, PLP2, PHOSPHOLIPASE A 2A 0.420 0.008
2 250666_at AT5G07100 WRKY26, WRKY DNA-binding protein 26 0.375 0.009
3 267509_at AT2G45660 AGL20, AGAMOUS-like 20, ATSOC1, SUPPRESSOR OF OVEREXPRESSION OF CO 1, SOC1, SUPPRESSOR OF OVEREXPRESSION OF CO 1 0.352 0.017
4 259352_at AT3G05170 [Phosphoglycerate mutase family protein] 0.280 -0.129
5 253859_at AT4G27657 unknown 0.278 -0.150
6 247573_at AT5G61160 AACT1, anthocyanin 5-aromatic acyltransferase 1 0.257 -0.209
7 255585_at AT4G01550 ANAC069, NAC domain containing protein 69, NAC069, NAC domain containing protein 69, NTM2, NAC with Transmembrane Motif 2 0.239 0.043
8 265248_at AT2G43010 AtPIF4, PIF4, phytochrome interacting factor 4, SRL2 0.234 -0.082
9 246260_at AT1G31820 PUT1, POLYAMINE UPTAKE TRANSPORTER 1 0.230 0.022
10 254232_at AT4G23600 CORI3, CORONATINE INDUCED 1, JR2, JASMONIC ACID RESPONSIVE 2 0.223 -0.344
11 262930_at AT1G65690 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.218 0.082
12 246929_at AT5G25210 unknown 0.213 0.037
13 259644_at AT1G68910 WIT2, WPP domain-interacting protein 2 0.208 0.150
14 266962_at AT2G39435 TRM18, TON1 Recruiting Motif 18 0.207 -0.068
15 264041_at AT2G03710 AGL3, AGAMOUS-like 3, SEP4, SEPALLATA 4 0.204 0.048
16 257899_at AT3G28345 ABCB15, ATP-binding cassette B15, MDR13, multi-drug resistance 13 0.201 0.028
17 259331_at AT3G03840 SAUR27, SMALL AUXIN UP RNA 27 0.196 -0.084
18 258339_at AT3G16120 [Dynein light chain type 1 family protein] 0.196 0.065
19 267391_at AT2G44480 BGLU17, beta glucosidase 17 0.185 -0.117
20 262446_at AT1G49310 unknown 0.176 0.088
21 262388_at AT1G49320 unknown 0.175 0.286
22 253672_at AT4G29820 ATCFIM-25, ARABIDOPSIS THALIANA HOMOLOG OF CFIM-25, CFIM-25, homolog of CFIM-25 0.172 -0.003
23 255753_at AT1G18570 AtMYB51, myb domain protein 51, BW51A, BW51B, HIG1, HIGH INDOLIC GLUCOSINOLATE 1, MYB51, myb domain protein 51 0.170 -0.035
24 253161_at AT4G35770 ATSEN1, ARABIDOPSIS THALIANA SENESCENCE 1, DIN1, DARK INDUCIBLE 1, SEN1, SENESCENCE 1, SEN1, SENESCENCE ASSOCIATED GENE 1 0.167 0.178
25 254241_at AT4G23190 AT-RLK3, RECEPTOR LIKE PROTEIN KINASE 3, CRK11, cysteine-rich RLK (RECEPTOR-like protein kinase) 11 0.167 0.045
26 250365_at AT5G11410 [Protein kinase superfamily protein] 0.166 0.095
27 259520_at AT1G12320 unknown 0.161 -0.140
28 263465_at AT2G31940 unknown 0.157 -0.083
29 267254_at AT2G23030 SNRK2-9, SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-9, SNRK2.9, SNF1-related protein kinase 2.9 0.155 -0.032
30 249928_at AT5G22250 AtCAF1b, CCR4- associated factor 1b, CAF1b, CCR4- associated factor 1b 0.153 -0.198
31 249309_at AT5G41410 BEL1, BELL 1 0.152 -0.125
32 256243_at AT3G12500 ATHCHIB, basic chitinase, B-CHI, CHI-B, HCHIB, basic chitinase, PR-3, PATHOGENESIS-RELATED 3, PR3, PATHOGENESIS-RELATED 3 0.149 -0.049
33 249807_at AT5G23870 [Pectinacetylesterase family protein] 0.149 0.126
34 255931_at AT1G12710 AtPP2-A12, phloem protein 2-A12, PP2-A12, phloem protein 2-A12 0.143 -0.118
35 252970_at AT4G38850 ATSAUR15, ARABIDOPSIS THALIANA SMALL AUXIN UPREGULATED 15, SAUR-AC1, ARABIDOPSIS COLUMBIA SAUR GENE 1, SAUR15, SMALL AUXIN UPREGULATED 15, SAUR_AC1, SMALL AUXIN UP RNA 1 FROM ARABIDOPSIS THALIANA ECOTYPE COLUMBIA 0.142 0.004
36 260546_at AT2G43520 ATTI2, trypsin inhibitor protein 2, TI2, trypsin inhibitor protein 2 0.141 -0.150
37 248911_at AT5G45830 ATDOG1, DOG1, DELAY OF GERMINATION 1, GAAS5, germination ability after storage 5, GSQ5, GLUCOSE SENSING QTL 5 0.139 -0.056
38 252533_at AT3G46110 [LOCATED IN: plasma membrane] 0.137 -0.213
39 260640_at AT1G53350 [Disease resistance protein (CC-NBS-LRR class) family] 0.132 -0.154
40 266419_at AT2G38760 ANN3, ANNEXIN 3, ANNAT3, annexin 3, AtANN3 0.130 0.038
41 245543_at AT4G15260 [UDP-Glycosyltransferase superfamily protein] 0.129 -0.106
42 259753_at AT1G71050 HIPP20, heavy metal associated isoprenylated plant protein 20 0.126 0.261
43 252427_at AT3G47640 PYE, POPEYE 0.126 0.164
44 249445_at AT5G39380 [Plant calmodulin-binding protein-related] 0.126 -0.202
45 245593_at AT4G14550 IAA14, indole-3-acetic acid inducible 14, SLR, SOLITARY ROOT 0.126 -0.031
46 260429_at AT1G72450 JAZ6, jasmonate-zim-domain protein 6, TIFY11B, TIFY DOMAIN PROTEIN 11B 0.126 -0.178
47 260156_at AT1G52880 ANAC018, Arabidopsis NAC domain containing protein 18, ATNAM, NAM, NO APICAL MERISTEM, NARS2, NAC-REGULATED SEED MORPHOLOGY 2 0.125 0.174
48 266235_at AT2G02360 AtPP2-B10, phloem protein 2-B10, PP2-B10, phloem protein 2-B10 0.125 0.035
49 245088_at AT2G39850 [Subtilisin-like serine endopeptidase family protein] 0.123 0.213
50 252539_at AT3G45730 unknown 0.122 -0.125
51 257226_at AT3G27880 unknown 0.118 0.065
52 257678_at AT3G20420 ATRTL2, RNASEIII-LIKE 2, RTL2, RNAse THREE-like protein 2 0.117 -0.152
53 253791_at AT4G28640 IAA11, indole-3-acetic acid inducible 11 0.112 -0.048
54 256922_at AT3G19010 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.110 -0.299
55 256050_at AT1G07000 ATEXO70B2, exocyst subunit exo70 family protein B2, EXO70B2, exocyst subunit exo70 family protein B2 0.109 0.070
56 246162_at AT4G36400 D2HGDH, D-2-hydroxyglutarate dehydrogenase 0.108 -0.029
57 246796_at AT5G26770 unknown 0.108 0.018
58 246270_at AT4G36500 unknown 0.106 0.160
59 259207_at AT3G09050 unknown 0.103 0.121
60 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 0.101 0.235
61 261402_at AT1G79670 RFO1, RESISTANCE TO FUSARIUM OXYSPORUM 1, WAKL22 0.100 -0.113
62 253000_at AT4G38360 LAZ1, LAZARUS 1 0.100 0.089
63 249551_at AT5G38220 [alpha/beta-Hydrolases superfamily protein] 0.099 0.073
64 264899_at AT1G23130 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.095 0.193
65 258782_at AT3G11750 FOLB1 0.095 -0.012
66 255028_at AT4G09890 unknown 0.094 0.222
67 262413_at AT1G34780 APRL4, APR-like 4, ATAPRL4, APR-like 4 0.094 0.040
68 246786_at AT5G27410 [D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein] 0.093 0.146
69 251752_at AT3G55740 ATPROT2, PROLINE TRANSPORTER 2, PROT2, proline transporter 2 0.092 -0.055
70 261413_at AT1G07630 PLL5, pol-like 5 0.089 0.070
71 247012_at AT5G67580 ATTBP3, ATTRB2, TELOMERE REPEAT BINDING FACTOR 2, TBP3, TELOMERE-BINDING PROTEIN 3, TRB2 0.088 -0.187
72 249109_at AT5G43700 ATAUX2-11, AUXIN INDUCIBLE 2-11, IAA4, indole-3-acetic acid inducible 4 0.088 0.014
73 248934_at AT5G46080 [Protein kinase superfamily protein] 0.088 -0.001
74 264957_at AT1G77000 ATSKP2;2, ARABIDOPSIS HOMOLOG OF HOMOLOG OF HUMAN SKP2 2, SKP2B 0.087 -0.166
75 253081_at AT4G36210 unknown 0.086 -0.064
76 254161_at AT4G24370 unknown 0.085 -0.105
77 263461_at AT2G31800 [Integrin-linked protein kinase family] 0.085 -0.025
78 258920_at AT3G10520 AHB2, haemoglobin 2, ARATH GLB2, ATGLB2, ARABIDOPSIS HEMOGLOBIN 2, GLB2, HEMOGLOBIN 2, HB2, haemoglobin 2, NSHB2, NON-SYMBIOTIC HAEMOGLOBIN 2 0.084 0.040
79 266393_at AT2G41260 ATM17, M17 -0.545 0.017
80 261651_at AT1G27760 ATSAT32, SALT-TOLERANCE 32, SAT32, SALT-TOLERANCE 32 -0.387 0.117
81 262719_at AT1G43590 unknown -0.366 -0.156
82 265117_at AT1G62500 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.252 -0.048
83 250196_at AT5G14580 [polyribonucleotide nucleotidyltransferase, putative] -0.241 -0.012
84 265234_at AT2G07721 unknown -0.239 0.197
85 253942_at AT4G27010 EMB2788, EMBRYO DEFECTIVE 2788 -0.229 -0.114
86 247962_at AT5G56580 ANQ1, ARABIDOPSIS NQK1, ATMKK6, ARABIDOPSIS THALIANA MAP KINASE KINASE 6, MKK6, MAP kinase kinase 6 -0.205 0.154
87 262669_at AT1G62850 [Class I peptide chain release factor] -0.202 -0.020
88 255424_at AT4G03340 [Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein] -0.201 -0.104
89 248675_at AT5G48820 ICK6, inhibitor/interactor with cyclin-dependent kinase, KRP3, KIP-RELATED PROTEIN 3 -0.200 -0.012
90 259386_at AT1G13400 JGL, JAGGED-LIKE, NUB, NUBBIN -0.200 0.090
91 258138_at AT3G24495 ATMSH7, ARABIDOPSIS THALIANA MUTS HOMOLOG 7, MSH6-2, MUTS HOMOLOG 6-2, MSH7, MUTS homolog 7 -0.197 -0.105
92 265154_at AT1G30960 [GTP-binding family protein] -0.197 -0.013
93 267118_at AT2G32590 EMB2795, EMBRYO DEFECTIVE 2795 -0.197 -0.108
94 256924_at AT3G29590 AT5MAT -0.193 0.306
95 245607_at AT4G14330 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.188 -0.029
96 265085_at AT1G03780 AtTPX2, TPX2, targeting protein for XKLP2 -0.186 -0.074
97 255278_at AT4G04940 [transducin family protein / WD-40 repeat family protein] -0.185 -0.138
98 250515_at AT5G09570 [Cox19-like CHCH family protein] -0.181 0.029
99 257333_at ATMG01360 COX1, cytochrome oxidase -0.181 0.183
100 253757_at AT4G28950 ARAC7, Arabidopsis RAC-like 7, ATRAC7, ATROP9, RAC7, ROP9, RHO-related protein from plants 9 -0.180 -0.037
101 262278_at AT1G68640 PAN, PERIANTHIA, TGA8, TGACG sequence-specific binding protein 8 -0.179 0.067
102 246067_at AT5G19410 ABCG23, ATP-binding cassette G23 -0.177 0.034
103 258871_at AT3G03060 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.177 -0.038
104 250529_at AT5G08610 PDE340, PIGMENT DEFECTIVE 340 -0.172 -0.188
105 259290_at AT3G11520 CYC2, CYCLIN 2, CYCB1;3, CYCLIN B1;3 -0.172 0.049
106 260192_at AT1G67630 EMB2814, EMBRYO DEFECTIVE 2814, POLA2, DNA polymerase alpha 2 -0.170 0.125
107 255597_at AT4G01730 [DHHC-type zinc finger family protein] -0.168 0.141
108 258242_at AT3G27640 [Transducin/WD40 repeat-like superfamily protein] -0.167 0.042
109 254537_at AT4G19730 [Glycosyl hydrolase superfamily protein] -0.167 0.019
110 266687_at AT2G19670 ATPRMT1A, ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 1A, PRMT1A, protein arginine methyltransferase 1A -0.166 -0.042
111 266280_at AT2G29260 [NAD(P)-binding Rossmann-fold superfamily protein] -0.165 -0.032
112 257334_at ATMG01370 ORF111D -0.164 0.162
113 262752_at AT1G16330 CYCB3;1, cyclin b3;1 -0.164 0.096
114 260077_at AT1G73620 [Pathogenesis-related thaumatin superfamily protein] -0.162 -0.136
115 248036_at AT5G55920 OLI2, OLIGOCELLULA 2 -0.162 0.205
116 248696_at AT5G48360 [Actin-binding FH2 (formin homology 2) family protein] -0.161 0.006
117 260331_at AT1G80270 PPR596, PENTATRICOPEPTIDE REPEAT 596 -0.159 0.022
118 246850_at AT5G26860 LON1, lon protease 1, LON_ARA_ARA -0.158 0.040
119 253605_at AT4G30990 [ARM repeat superfamily protein] -0.158 -0.062
120 263264_at AT2G38810 HTA8, histone H2A 8 -0.158 0.017
121 252625_at AT3G44750 ATHD2A, HD2A, HISTONE DEACETYLASE 2A, HDA3, histone deacetylase 3, HDT1 -0.157 0.031
122 254862_at AT4G12030 BASS5, BILE ACID:SODIUM SYMPORTER FAMILY PROTEIN 5, BAT5, bile acid transporter 5 -0.155 -0.111
123 260061_at AT1G73690 AT;CDKD;1, CYCLIN-DEPENDENT KINASE D1, CAK3AT, CDKD1;1, cyclin-dependent kinase D1;1 -0.154 -0.129
124 263612_at AT2G16440 MCM4, MINICHROMOSOME MAINTENANCE 4 -0.154 0.017
125 251355_at AT3G61100 [Putative endonuclease or glycosyl hydrolase] -0.154 -0.057
126 255958_at AT1G22150 SULTR1;3, sulfate transporter 1;3 -0.153 -0.185
127 252442_at AT3G46940 DUT1, DUTP-PYROPHOSPHATASE-LIKE 1 -0.152 -0.006
128 253828_at AT4G27970 SLAH2, SLAC1 homologue 2 -0.151 0.025
129 252237_at AT3G49950 [GRAS family transcription factor] -0.151 0.174
130 261364_at AT1G53140 DRP5A, Dynamin related protein 5A -0.150 -0.288
131 245828_at AT1G57820 ORTH2, ORTHRUS 2, VIM1, VARIANT IN METHYLATION 1 -0.150 -0.052
132 266223_at AT2G28790 [Pathogenesis-related thaumatin superfamily protein] -0.148 -0.076
133 260935_at AT1G45110 [Tetrapyrrole (Corrin/Porphyrin) Methylases] -0.148 0.054
134 264176_at AT1G02110 unknown -0.148 0.003
135 262477_at AT1G11220 unknown -0.148 0.047
136 254076_at AT4G25340 ATFKBP53, FKBP53, FK506 BINDING PROTEIN 53 -0.148 0.159
137 256864_at AT3G23890 ATTOPII, TOPII, topoisomerase II -0.147 -0.196
138 247575_at AT5G61030 GR-RBP3, glycine-rich RNA-binding protein 3 -0.147 -0.020
139 256980_at AT3G26932 DRB3, dsRNA-binding protein 3 -0.147 -0.023
140 246246_at AT4G37170 [Pentatricopeptide repeat (PPR) superfamily protein] -0.147 -0.019
141 262178_at AT1G77860 KOM, KOMPEITO -0.147 0.102
142 248841_at AT5G46740 UBP21, ubiquitin-specific protease 21 -0.146 -0.489
143 250785_at AT5G05510 [Mad3/BUB1 homology region 1] -0.146 -0.141
144 244943_at ATMG00070 NAD9, NADH dehydrogenase subunit 9 -0.145 -0.183
145 249830_at AT5G23300 PYRD, pyrimidine d -0.145 0.102
146 263712_at AT2G20585 NFD6, NUCLEAR FUSION DEFECTIVE 6 -0.144 -0.031
147 254672_at AT4G18420 unknown -0.143 -0.067
148 264969_at AT1G67320 EMB2813, EMBRYO DEFECTIVE 2813 -0.142 0.090
149 262943_at AT1G79470 [Aldolase-type TIM barrel family protein] -0.142 0.113
150 265895_at AT2G15000 unknown -0.142 0.015
151 262486_at AT1G21740 unknown -0.142 -0.005
152 261080_at AT1G07370 ATPCNA1, PROLIFERATING CELLULAR NUCLEAR ANTIGEN 1, PCNA1, proliferating cellular nuclear antigen 1 -0.141 -0.077
153 252019_at AT3G53040 [late embryogenesis abundant protein, putative / LEA protein, putative] -0.141 -0.026
154 256125_at AT1G18250 ATLP-1 -0.140 -0.178
155 256797_at AT3G18600 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.139 0.141