4.0:Information of module
elf3-7-16ºC
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0050896 response to stimulus BP 6.610e-11
GO:0009605 response to external stimulus BP 6.511e-10
GO:0042221 response to chemical BP 1.180e-08
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0034285 response to disaccharide BP 3.096e-05
GO:0009958 positive gravitropism BP 6.552e-05
GO:0009746 response to hexose BP 7.490e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
elf3-7-16ºC		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 247718_at AT5G59310 LTP4, lipid transfer protein 4 0.746 0.093
2 264400_at AT1G61800 ATGPT2, ARABIDOPSIS GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, GPT2, glucose-6-phosphate/phosphate translocator 2 0.723 0.054
3 262050_at AT1G80130 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.587 -0.130
4 248048_at AT5G56080 ATNAS2, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 2, NAS2, nicotianamine synthase 2 0.508 0.116
5 260030_at AT1G68880 AtbZIP, basic leucine-zipper 8, bZIP, basic leucine-zipper 8 0.478 -0.267
6 256779_at AT3G13784 AtcwINV5, cell wall invertase 5, CWINV5, cell wall invertase 5 0.467 0.002
7 245982_at AT5G13170 AtSWEET15, SAG29, senescence-associated gene 29, SWEET15 0.436 0.043
8 264638_at AT1G65480 FT, FLOWERING LOCUS T, RSB8, REDUCED STEM BRANCHING 8 0.408 -0.032
9 251293_at AT3G61930 unknown 0.389 0.054
10 263391_at AT2G11810 ATMGD3, MGD3, MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 3, MGDC, monogalactosyldiacylglycerol synthase type C 0.363 0.092
11 266098_at AT2G37870 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.362 -0.029
12 254232_at AT4G23600 CORI3, CORONATINE INDUCED 1, JR2, JASMONIC ACID RESPONSIVE 2 0.346 -0.344
13 264893_at AT1G23140 [Calcium-dependent lipid-binding (CaLB domain) family protein] 0.343 0.051
14 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 0.340 0.028
15 266778_at AT2G29090 CYP707A2, cytochrome P450, family 707, subfamily A, polypeptide 2 0.334 0.023
16 264958_at AT1G76960 unknown 0.329 -0.172
17 257689_at AT3G12820 AtMYB10, myb domain protein 10, MYB10, myb domain protein 10 0.324 0.040
18 259507_at AT1G43910 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.324 0.065
19 245624_at AT4G14090 [UDP-Glycosyltransferase superfamily protein] 0.320 -0.001
20 256766_at AT3G22231 PCC1, PATHOGEN AND CIRCADIAN CONTROLLED 1 0.316 0.069
21 257793_at AT3G26960 [Pollen Ole e 1 allergen and extensin family protein] 0.314 0.193
22 255795_at AT2G33380 AtCLO3, Arabidopsis thaliana caleosin 3, CLO-3, caleosin 3, CLO3, caleosin 3, RD20, RESPONSIVE TO DESSICATION 20 0.307 0.071
23 247814_at AT5G58310 ATMES18, ARABIDOPSIS THALIANA METHYL ESTERASE 18, MES18, methyl esterase 18 0.294 -0.166
24 261684_at AT1G47400 unknown 0.293 -0.201
25 256924_at AT3G29590 AT5MAT 0.293 0.306
26 254371_at AT4G21760 BGLU47, beta-glucosidase 47 0.289 -0.061
27 249917_at AT5G22460 [alpha/beta-Hydrolases superfamily protein] 0.288 0.146
28 265053_at AT1G52000 [Mannose-binding lectin superfamily protein] 0.269 -0.038
29 255604_at AT4G01080 TBL26, TRICHOME BIREFRINGENCE-LIKE 26 0.264 0.142
30 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 0.258 -0.254
31 250083_at AT5G17220 ATGSTF12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12, GST26, GLUTATHIONE S-TRANSFERASE 26, GSTF12, glutathione S-transferase phi 12, TT19, TRANSPARENT TESTA 19 0.251 -0.033
32 259352_at AT3G05170 [Phosphoglycerate mutase family protein] 0.250 -0.129
33 253382_at AT4G33040 [Thioredoxin superfamily protein] 0.249 0.220
34 262232_at AT1G68600 [Aluminium activated malate transporter family protein] 0.236 -0.036
35 264211_at AT1G22770 FB, GI, GIGANTEA 0.235 -0.109
36 255958_at AT1G22150 SULTR1;3, sulfate transporter 1;3 0.231 -0.185
37 258158_at AT3G17790 ATACP5, ATPAP17, PAP17, purple acid phosphatase 17 0.229 0.056
38 245882_at AT5G09470 DIC3, dicarboxylate carrier 3 0.229 -0.049
39 265665_at AT2G27420 [Cysteine proteinases superfamily protein] 0.228 -0.157
40 266989_at AT2G39330 JAL23, jacalin-related lectin 23 0.225 -0.015
41 256750_at AT3G27150 [Galactose oxidase/kelch repeat superfamily protein] 0.216 0.305
42 258618_at AT3G02885 GASA5, GAST1 protein homolog 5 0.208 0.030
43 246071_at AT5G20150 ATSPX1, ARABIDOPSIS THALIANA SPX DOMAIN GENE 1, SPX1, SPX domain gene 1 0.206 0.078
44 253101_at AT4G37430 CYP81F1, CYTOCHROME P450 MONOOXYGENASE 81F1, CYP91A2, cytochrome P450, family 91, subfamily A, polypeptide 2 0.203 -0.033
45 264041_at AT2G03710 AGL3, AGAMOUS-like 3, SEP4, SEPALLATA 4 0.193 0.048
46 265122_at AT1G62540 FMO GS-OX2, flavin-monooxygenase glucosinolate S-oxygenase 2 0.193 -0.137
47 260335_at AT1G74000 SS3, strictosidine synthase 3 0.185 -0.116
48 263318_at AT2G24762 AtGDU4, glutamine dumper 4, GDU4, glutamine dumper 4 0.185 -0.171
49 255294_at AT4G04750 [Major facilitator superfamily protein] 0.184 0.005
50 256100_at AT1G13750 [Purple acid phosphatases superfamily protein] 0.184 -0.036
51 252415_at AT3G47340 ASN1, glutamine-dependent asparagine synthase 1, AT-ASN1, ARABIDOPSIS THALIANA GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1, DIN6, DARK INDUCIBLE 6 -0.834 -0.011
52 253161_at AT4G35770 ATSEN1, ARABIDOPSIS THALIANA SENESCENCE 1, DIN1, DARK INDUCIBLE 1, SEN1, SENESCENCE 1, SEN1, SENESCENCE ASSOCIATED GENE 1 -0.830 0.178
53 266544_at AT2G35300 AtLEA4-2, late embryogenesis abundant 4-2, LEA18, late embryogenesis abundant 18, LEA4-2, late embryogenesis abundant 4-2 -0.758 -0.061
54 256464_at AT1G32560 AtLEA4-1, Late Embryogenesis Abundant 4-1, LEA4-1, Late Embryogenesis Abundant 4-1 -0.577 0.066
55 260668_at AT1G19530 unknown -0.559 0.007
56 262719_at AT1G43590 unknown -0.495 -0.156
57 266719_at AT2G46830 AtCCA1, CCA1, circadian clock associated 1 -0.495 0.013
58 258402_at AT3G15450 [Aluminium induced protein with YGL and LRDR motifs] -0.469 0.085
59 261569_at AT1G01060 LHY, LATE ELONGATED HYPOCOTYL, LHY1, LATE ELONGATED HYPOCOTYL 1 -0.457 -0.072
60 265817_at AT2G18050 HIS1-3, histone H1-3 -0.457 0.087
61 259751_at AT1G71030 ATMYBL2, ARABIDOPSIS MYB-LIKE 2, MYBL2, MYB-like 2 -0.431 0.012
62 266393_at AT2G41260 ATM17, M17 -0.421 0.017
63 253874_at AT4G27450 [Aluminium induced protein with YGL and LRDR motifs] -0.420 0.211
64 248793_at AT5G47240 atnudt8, nudix hydrolase homolog 8, NUDT8, nudix hydrolase homolog 8 -0.417 -0.201
65 267461_at AT2G33830 AtDRM2, DRM2, dormancy associated gene 2 -0.410 -0.024
66 264612_at AT1G04560 [AWPM-19-like family protein] -0.380 -0.014
67 260431_at AT1G68190 BBX27, B-box domain protein 27 -0.365 -0.118
68 264339_at AT1G70290 ATTPS8, ATTPSC, TPS8, trehalose-6-phosphatase synthase S8 -0.348 -0.140
69 266656_at AT2G25900 ATCTH, ATTZF1, A. THALIANA TANDEM ZINC FINGER PROTEIN 1 -0.344 -0.013
70 247754_at AT5G59080 unknown -0.344 -0.026
71 251869_at AT3G54500 LNK2, night light-inducible and clock-regulated 2 -0.331 0.019
72 264788_at AT2G17880 DJC24, DNA J protein C24 -0.323 -0.116
73 250476_at AT5G10140 AGL25, AGAMOUS-like 25, FLC, FLOWERING LOCUS C, FLF, FLOWERING LOCUS F, RSB6, REDUCED STEM BRANCHING 6 -0.305 0.123
74 258497_at AT3G02380 ATCOL2, CONSTANS-LIKE 2, BBX3, B-box domain protein 3, COL2, CONSTANS-like 2 -0.305 -0.117
75 250099_at AT5G17300 RVE1, REVEILLE 1 -0.295 0.187
76 261395_at AT1G79700 WRI4, WRINKLED 4 -0.287 -0.051
77 262986_at AT1G23390 [Kelch repeat-containing F-box family protein] -0.281 0.108
78 248969_at AT5G45310 unknown -0.280 0.019
79 263953_at AT2G36050 ATOFP15, ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 15, OFP15, ovate family protein 15 -0.275 -0.043
80 261026_at AT1G01240 unknown -0.270 -0.063
81 264379_at AT2G25200 unknown -0.270 0.277
82 248910_at AT5G45820 CIPK20, CBL-interacting protein kinase 20, PKS18, PROTEIN KINASE 18, SnRK3.6, SNF1-RELATED PROTEIN KINASE 3.6 -0.263 0.048
83 258939_at AT3G10020 unknown -0.262 0.027
84 247223_at AT5G65070 AGL69, AGAMOUS-like 69, FCL4, MAF4, MADS AFFECTING FLOWERING 4 -0.256 0.040
85 267538_at AT2G41870 [Remorin family protein] -0.245 0.005
86 265724_at AT2G32100 ATOFP16, RABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16, OFP16, ovate family protein 16 -0.242 -0.201
87 246854_at AT5G26200 [Mitochondrial substrate carrier family protein] -0.234 0.006
88 256980_at AT3G26932 DRB3, dsRNA-binding protein 3 -0.220 -0.023
89 249923_at AT5G19120 [Eukaryotic aspartyl protease family protein] -0.207 -0.100
90 256024_at AT1G58340 BCD1, BUSH-AND-CHLOROTIC-DWARF 1, ZF14, ZRZ, ZRIZI -0.205 -0.036
91 246962_s_at AT5G24800 ATBZIP9, ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 9, BZIP9, basic leucine zipper 9, BZO2H2, BASIC LEUCINE ZIPPER O2 HOMOLOG 2 -0.197 0.117
92 252765_at AT3G42800 unknown -0.192 0.159
93 248050_at AT5G56100 [glycine-rich protein / oleosin] -0.192 -0.041
94 254954_at AT4G10910 unknown -0.188 -0.003
95 258262_at AT3G15770 unknown -0.182 0.101
96 251580_at AT3G58450 [Adenine nucleotide alpha hydrolases-like superfamily protein] -0.180 -0.016
97 257113_at AT3G20130 CYP705A22, cytochrome P450, family 705, subfamily A, polypeptide 22, GPS1, gravity persistence signal 1 -0.171 -0.018
98 263128_at AT1G78600 BBX22, B-box domain protein 22, DBB3, DOUBLE B-BOX 3, LZF1, light-regulated zinc finger protein 1, STH3, SALT TOLERANCE HOMOLOG 3 -0.162 -0.085
99 247880_at AT5G57780 P1R1, P1R1 -0.160 0.043