4.0:Information of module
SCR-GR Time 6H Dex
In comparison with root cortex pH4.6 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009682 induced systemic resistance BP 6.512e-03
GO:0006333 chromatin assembly or disassembly BP 1.640e-02
GO:0042430 indole-containing compound metabolic pro... BP 2.465e-02
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009691 cytokinin biosynthetic process BP 7.829e-03
GO:0009694 jasmonic acid metabolic process BP 1.010e-02
GO:0009690 cytokinin metabolic process BP 1.180e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
SCR-GR Time 6H Dex		 Log2 signal ratio
root cortex pH4.6
1 260406_at AT1G69920 ATGSTU12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 12, GSTU12, glutathione S-transferase TAU 12 0.416 0.008
2 265405_at AT2G16750 [Protein kinase protein with adenine nucleotide alpha hydrolases-like domain] 0.406 -0.459
3 250680_at AT5G06570 [alpha/beta-Hydrolases superfamily protein] 0.340 -0.076
4 264083_at AT2G31230 ATERF15, ethylene-responsive element binding factor 15, ERF15, ethylene-responsive element binding factor 15 0.300 -0.020
5 247949_at AT5G57220 CYP81F2, cytochrome P450, family 81, subfamily F, polypeptide 2 0.269 0.304
6 249599_at AT5G37990 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.245 -0.011
7 259028_at AT3G09290 TAC1, telomerase activator1 0.219 -0.128
8 248327_at AT5G52750 [Heavy metal transport/detoxification superfamily protein ] 0.211 -0.173
9 248389_at AT5G51990 CBF4, C-repeat-binding factor 4, DREB1D, DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 0.203 -0.048
10 254660_at AT4G18250 [receptor serine/threonine kinase, putative] 0.197 0.050
11 266532_at AT2G16890 [UDP-Glycosyltransferase superfamily protein] 0.197 -0.067
12 266860_at AT2G26870 NPC2, non-specific phospholipase C2 0.188 0.069
13 247549_at AT5G61420 AtMYB28, HAG1, HIGH ALIPHATIC GLUCOSINOLATE 1, MYB28, myb domain protein 28, PMG1, PRODUCTION OF METHIONINE-DERIVED GLUCOSINOLATE 1 0.186 -0.011
14 257467_at AT1G31320 LBD4, LOB domain-containing protein 4 0.174 -0.071
15 264840_at AT1G03440 [Leucine-rich repeat (LRR) family protein] 0.164 -0.094
16 248276_at AT5G53550 ATYSL3, YELLOW STRIPE LIKE 3, YSL3, YELLOW STRIPE like 3 0.164 -0.017
17 261125_at AT1G04990 [Zinc finger C-x8-C-x5-C-x3-H type family protein] 0.164 -0.041
18 253618_at AT4G30420 UMAMIT34, Usually multiple acids move in and out Transporters 34 0.164 -0.053
19 256359_at AT1G66460 [Protein kinase superfamily protein] 0.159 -0.175
20 253463_at AT4G32105 [Beta-1,3-N-Acetylglucosaminyltransferase family protein] 0.159 -0.057
21 255108_at AT4G08740 unknown 0.157 -0.102
22 253736_at AT4G28780 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.156 -0.202
23 258213_at AT3G17950 unknown 0.155 -0.094
24 254310_at AT4G22430 [F-box family protein] 0.152 -0.074
25 253498_at AT4G31890 [ARM repeat superfamily protein] 0.151 0.088
26 251544_at AT3G58790 GAUT15, galacturonosyltransferase 15 0.150 -0.098
27 249752_at AT5G24660 LSU2, RESPONSE TO LOW SULFUR 2 0.149 -0.083
28 248839_at AT5G46690 bHLH071, beta HLH protein 71 0.147 -0.074
29 254178_at AT4G23880 unknown 0.146 0.000
30 262557_at AT1G31330 PSAF, photosystem I subunit F 0.144 -0.157
31 256989_at AT3G28580 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.142 0.082
32 245534_at AT4G15150 [glycine-rich protein] 0.140 -0.017
33 258265_at AT3G15800 [Glycosyl hydrolase superfamily protein] 0.137 -0.091
34 259981_at AT1G76450 [Photosystem II reaction center PsbP family protein] 0.137 -0.091
35 264074_at AT2G10780 [gypsy-like retrotransposon family, has a 0. P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)] 0.136 -0.058
36 262464_at AT1G50280 [Phototropic-responsive NPH3 family protein] 0.135 0.050
37 247180_at AT5G65350 HTR11, histone 3 11 0.134 -0.014
38 255916_at AT5G28550 unknown 0.134 -0.037
39 261162_at AT1G34440 unknown 0.133 -0.047
40 266564_at AT2G24000 scpl22, serine carboxypeptidase-like 22 0.131 -0.044
41 253166_at AT4G35290 ATGLR3.2, ATGLUR2, GLR3.2, GLUTAMATE RECEPTOR 3.2, GLUR2, glutamate receptor 2 0.131 -0.006
42 267634_at AT2G42100 [Actin-like ATPase superfamily protein] 0.131 0.011
43 253641_at AT4G29980 unknown 0.130 -0.078
44 248359_at AT5G52410 unknown 0.129 -0.047
45 257909_at AT3G25480 [Rhodanese/Cell cycle control phosphatase superfamily protein] 0.129 0.046
46 258769_at AT3G10870 ATMES17, ARABIDOPSIS THALIANA METHYL ESTERASE 17, MES17, methyl esterase 17 0.128 -0.022
47 252073_at AT3G51750 unknown -0.445 0.112
48 264939_at AT1G60630 [Leucine-rich repeat protein kinase family protein] -0.297 -0.112
49 254111_at AT4G24890 ATPAP24, ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 24, PAP24, purple acid phosphatase 24 -0.290 -0.102
50 264613_at AT1G04640 LIP2, lipoyltransferase 2 -0.239 0.222
51 246432_at AT5G17490 AtRGL3, RGL3, RGA-like protein 3 -0.236 -0.035
52 249793_at AT5G23680 [Sterile alpha motif (SAM) domain-containing protein] -0.236 0.028
53 248673_at AT5G48780 [disease resistance protein (TIR-NBS class)] -0.230 -0.060
54 248831_at AT5G47160 [YDG/SRA domain-containing protein] -0.219 -0.010
55 247399_at AT5G62960 unknown -0.218 0.030
56 255429_at AT4G03410 [Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein] -0.206 0.113
57 249546_at AT5G38150 PMI15, plastid movement impaired 15 -0.183 -0.073
58 252936_at AT4G39160 [Homeodomain-like superfamily protein] -0.177 0.061
59 256340_at AT1G72070 [Chaperone DnaJ-domain superfamily protein] -0.172 0.218
60 261095_at AT1G62930 RPF3, RNA processing factor 3 -0.169 -0.004
61 265351_at AT2G22630 AGL17, AGAMOUS-like 17 -0.163 0.039
62 257429_at AT2G27940 [RING/U-box superfamily protein] -0.163 0.042
63 260518_at AT1G51410 [NAD(P)-binding Rossmann-fold superfamily protein] -0.160 0.078
64 255169_x_at AT4G07940 unknown -0.160 0.087
65 245068_at AT2G23260 UGT84B1, UDP-glucosyl transferase 84B1 -0.158 0.001
66 255579_at AT4G01460 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.155 -0.057
67 255780_at AT1G18580 GAUT11, galacturonosyltransferase 11 -0.154 -0.064
68 253822_at AT4G28410 RSA1, Root System Architecture 1 -0.153 0.024
69 251402_at AT3G60290 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.152 -0.113
70 249865_at AT5G22820 [ARM repeat superfamily protein] -0.148 0.127
71 262622_at AT1G06510 unknown -0.147 0.196
72 263822_at AT2G40240 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.139 0.057
73 261467_at AT1G28520 ATVOZ1, VASCULAR PLANT ONE ZINC FINGER PROTEIN, VOZ1, vascular plant one zinc finger protein -0.139 0.103
74 263586_at AT2G25350 [Phox (PX) domain-containing protein] -0.135 -0.046
75 266962_at AT2G39435 TRM18, TON1 Recruiting Motif 18 -0.133 -0.207
76 256655_at AT3G18890 AtTic62, translocon at the inner envelope membrane of chloroplasts 62, Tic62, translocon at the inner envelope membrane of chloroplasts 62 -0.133 -0.069
77 261949_at AT1G64670 BDG1, BODYGUARD1, CED1, 9-CIS EPOXYCAROTENOID DIOXYGENASE DEFECTIVE 1 -0.128 -0.177
78 265302_at AT2G13970 [Mutator-like transposase family, has a 4.1e-39 P-value blast match to GB:AAA21566 mudrA of transposon=MuDR (MuDr-element) (Zea mays)] -0.127 -0.021
79 264206_at AT1G22730 [MA3 domain-containing protein] -0.125 0.023
80 247684_at AT5G59670 [Leucine-rich repeat protein kinase family protein] -0.124 -0.030
81 257294_at AT3G15570 [Phototropic-responsive NPH3 family protein] -0.123 -0.119
82 256792_at AT3G22150 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.121 0.047
83 261541_at AT1G63600 [Receptor-like protein kinase-related family protein] -0.119 0.037
84 257314_at AT3G26590 [MATE efflux family protein] -0.118 0.016
85 255751_at AT1G31950 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.118 0.024
86 257855_at AT3G13040 [myb-like HTH transcriptional regulator family protein] -0.114 -0.095
87 246903_at AT5G25750 unknown -0.113 -0.036
88 255980_at AT1G33970 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.112 0.182
89 252019_at AT3G53040 [late embryogenesis abundant protein, putative / LEA protein, putative] -0.111 0.007
90 261838_at AT1G16030 Hsp70b, heat shock protein 70B -0.110 -0.078
91 247079_at AT5G66055 AKRP, ankyrin repeat protein, EMB16, EMBRYO DEFECTIVE 16, EMB2036, EMBRYO DEFECTIVE 2036 -0.108 0.016
92 248483_at AT5G50990 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.107 0.097