4.0:Information of module
SCR-GR Time 12H Dex
In comparison with Col-0 2HS help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010243 response to organonitrogen compound BP 1.362e-15
GO:0010200 response to chitin BP 5.828e-15
GO:1901698 response to nitrogen compound BP 2.344e-11
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009220 pyrimidine ribonucleotide biosynthetic p... BP 4.520e-08
GO:0009218 pyrimidine ribonucleotide metabolic proc... BP 9.642e-08
GO:0006221 pyrimidine nucleotide biosynthetic proce... BP 1.490e-07
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
SCR-GR Time 12H Dex		 Log2 signal ratio
Col-0 2HS
1 248316_at AT5G52670 [Copper transport protein family] 0.661 0.117
2 260239_at AT1G74360 [Leucine-rich repeat protein kinase family protein] 0.512 0.180
3 247729_at AT5G59530 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.488 -0.057
4 265008_at AT1G61560 ATMLO6, MILDEW RESISTANCE LOCUS O 6, MLO6, MILDEW RESISTANCE LOCUS O 6 0.447 -0.066
5 267026_at AT2G38340 DREB19, dehydration response element-binding protein 19 0.433 0.045
6 247197_at AT5G65240 [Leucine-rich repeat protein kinase family protein] 0.420 -0.112
7 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] 0.420 0.018
8 251825_at AT3G55100 ABCG17, ATP-binding cassette G17 0.417 0.024
9 261819_at AT1G11410 [S-locus lectin protein kinase family protein] 0.403 -0.032
10 252984_at AT4G37990 ATCAD8, ARABIDOPSIS THALIANA CINNAMYL-ALCOHOL DEHYDROGENASE 8, CAD-B2, CINNAMYL-ALCOHOL DEHYDROGENASE B2, ELI3, ELICITOR-ACTIVATED GENE 3, ELI3-2, elicitor-activated gene 3-2 0.398 0.075
11 246463_at AT5G16970 AER, alkenal reductase, AT-AER, alkenal reductase 0.394 0.024
12 259783_at AT1G29510 SAUR67, SMALL AUXIN UPREGULATED RNA 67 0.379 0.213
13 246418_at AT5G16960 [Zinc-binding dehydrogenase family protein] 0.373 0.016
14 256285_at AT3G12510 [MADS-box family protein] 0.352 0.080
15 253322_at AT4G33980 unknown 0.348 0.400
16 264495_at AT1G27380 RIC2, ROP-interactive CRIB motif-containing protein 2 0.331 -0.019
17 248741_at AT5G48170 SLY2, SLEEPY2, SNE, SNEEZY 0.316 0.015
18 256576_at AT3G28210 PMZ, SAP12, STRESS-ASSOCIATED PROTEIN 12 0.316 0.215
19 260023_at AT1G30040 ATGA2OX2, gibberellin 2-oxidase, GA2OX2, gibberellin 2-oxidase, GA2OX2, GIBBERELLIN 2-OXIDASE 2 0.301 0.338
20 247109_at AT5G65870 ATPSK5, phytosulfokine 5 precursor, PSK5, PSK5, phytosulfokine 5 precursor 0.298 0.135
21 253044_at AT4G37290 unknown 0.296 0.221
22 264436_at AT1G10370 ATGSTU17, GLUTATHIONE S-TRANSFERASE TAU 17, ERD9, EARLY-RESPONSIVE TO DEHYDRATION 9, GST30, GLUTATHIONE S-TRANSFERASE 30, GST30B, GLUTATHIONE S-TRANSFERASE 30B, GSTU17, GLUTATHIONE S-TRANSFERASE U17 0.282 0.390
23 255900_at AT1G17830 unknown 0.280 0.573
24 246984_at AT5G67310 CYP81G1, cytochrome P450, family 81, subfamily G, polypeptide 1 0.276 0.067
25 251790_at AT3G55470 [Calcium-dependent lipid-binding (CaLB domain) family protein] 0.273 -0.016
26 252234_at AT3G49780 ATPSK3 (FORMER SYMBOL), ATPSK4, phytosulfokine 4 precursor, PSK4, phytosulfokine 4 precursor 0.270 0.282
27 246600_at AT5G14930 SAG101, senescence-associated gene 101 0.264 -0.055
28 265926_at AT2G18600 [Ubiquitin-conjugating enzyme family protein] 0.258 0.137
29 252956_at AT4G38580 ATFP6, farnesylated protein 6, FP6, farnesylated protein 6, HIPP26, HEAVY METAL ASSOCIATED ISOPRENYLATED PLANT PROTEIN 26 0.256 0.040
30 255422_at AT4G03270 CYCD6;1, Cyclin D6;1 0.249 0.018
31 262517_at AT1G17180 ATGSTU25, glutathione S-transferase TAU 25, GSTU25, glutathione S-transferase TAU 25 0.247 0.192
32 259520_at AT1G12320 unknown 0.242 -0.098
33 251946_at AT3G53540 TRM19, TON1 Recruiting Motif 19 0.240 -0.065
34 250918_at AT5G03610 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.239 -0.081
35 267515_at AT2G45680 TCP9, TCP domain protein 9 0.238 -0.062
36 254210_at AT4G23450 AIRP1, ABA Insensitive RING Protein 1, AtAIRP1 0.237 0.135
37 248487_at AT5G51070 CLPD, ERD1, EARLY RESPONSIVE TO DEHYDRATION 1, SAG15, SENESCENCE ASSOCIATED GENE 15 0.236 0.004
38 248048_at AT5G56080 ATNAS2, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 2, NAS2, nicotianamine synthase 2 0.235 0.002
39 247625_at AT5G60200 TMO6, TARGET OF MONOPTEROS 6 0.235 0.197
40 260648_at AT1G08050 [Zinc finger (C3HC4-type RING finger) family protein] 0.230 0.025
41 257646_at AT3G25740 MAP1B, methionine aminopeptidase 1C, MAP1C, METHIONINE AMINOPEPTIDASE 1C 0.227 -0.003
42 257952_at AT3G21770 [Peroxidase superfamily protein] 0.226 -0.100
43 250680_at AT5G06570 [alpha/beta-Hydrolases superfamily protein] 0.226 0.143
44 250246_at AT5G13700 APAO, ATPAO1, polyamine oxidase 1, PAO1, polyamine oxidase 1 0.225 0.025
45 264941_at AT1G60680 [NAD(P)-linked oxidoreductase superfamily protein] 0.222 -0.004
46 261763_at AT1G15520 ABCG40, ATP-binding cassette G40, ATABCG40, Arabidopsis thaliana ATP-binding cassette G40, ATPDR12, PLEIOTROPIC DRUG RESISTANCE 12, PDR12, pleiotropic drug resistance 12 0.221 -0.017
47 254111_at AT4G24890 ATPAP24, ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 24, PAP24, purple acid phosphatase 24 -0.427 0.011
48 245172_at AT2G47540 [Pollen Ole e 1 allergen and extensin family protein] -0.395 -0.128
49 260542_at AT2G43560 [FKBP-like peptidyl-prolyl cis-trans isomerase family protein] -0.293 0.012
50 247320_at AT5G64040 PSAN -0.284 -0.001
51 267182_at AT2G23360 unknown -0.265 -0.110
52 250087_at AT5G17270 [Protein prenylyltransferase superfamily protein] -0.258 0.018
53 259411_at AT1G13410 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.235 -0.112
54 248237_at AT5G53890 AtPSKR2, PSKR2, phytosylfokine-alpha receptor 2 -0.232 -0.143
55 248307_at AT5G52850 [Pentatricopeptide repeat (PPR) superfamily protein] -0.227 -0.203
56 267445_at AT2G33680 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.210 0.033
57 264206_at AT1G22730 [MA3 domain-containing protein] -0.199 -0.071
58 265609_at AT2G25420 [transducin family protein / WD-40 repeat family protein] -0.193 -0.118
59 260465_at AT1G10910 EMB3103, EMBRYO DEFECTIVE 3103 -0.193 0.002
60 262071_at AT1G59510 CF9 -0.192 -0.190
61 257406_at AT1G27060 [Regulator of chromosome condensation (RCC1) family protein] -0.186 0.025
62 259964_at AT1G53680 ATGSTU28, glutathione S-transferase TAU 28, GSTU28, glutathione S-transferase TAU 28 -0.185 -0.087
63 251700_at AT3G56640 SEC15A, exocyst complex component sec15A -0.183 -0.128
64 257487_at AT1G71850 [Ubiquitin carboxyl-terminal hydrolase family protein] -0.183 -0.250
65 254606_at AT4G19030 AT-NLM1, ATNLM1, NOD26-LIKE MAJOR INTRINSIC PROTEIN 1, NIP1;1, NOD26-LIKE INTRINSIC PROTEIN 1;1, NLM1, NOD26-like major intrinsic protein 1 -0.181 -0.137
66 259928_at AT1G34380 [5'-3' exonuclease family protein] -0.178 0.013
67 258174_at AT3G21470 [Pentatricopeptide repeat (PPR-like) superfamily protein] -0.176 -0.027
68 246269_at AT4G37110 [Zinc-finger domain of monoamine-oxidase A repressor R1] -0.176 0.030
69 248498_at AT5G50390 EMB3141, EMBRYO DEFECTIVE 3141 -0.174 -0.239
70 251690_at AT3G56510 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.174 0.008
71 260404_at AT1G69950 [hAT-like transposase family (hobo/Ac/Tam3), has a 1.0e-71 P-value blast match to GB:CAA29005 ORFa of Maize Ac (hAT-element) (Zea mays)] -0.172 -0.100
72 262829_at AT1G14970 [O-fucosyltransferase family protein] -0.170 0.027
73 255169_x_at AT4G07940 unknown -0.169 0.008
74 251805_at AT3G55530 AtSDIR1, SDIR1, SALT- AND DROUGHT-INDUCED RING FINGER1 -0.169 -0.108
75 259210_at AT3G09150 ATHY2, ARABIDOPSIS ELONGATED HYPOCOTYL 2, GUN3, GENOMES UNCOUPLED 3, HY2, ELONGATED HYPOCOTYL 2 -0.169 -0.016
76 259707_at AT1G77490 TAPX, thylakoidal ascorbate peroxidase -0.169 0.027
77 260717_at AT1G48120 [hydrolases] -0.169 -0.017
78 266797_at AT2G22840 AtGRF1, growth-regulating factor 1, GRF1, growth-regulating factor 1 -0.166 -0.396
79 248679_at AT5G48830 unknown -0.164 0.004
80 263100_at AT2G05210 ATPOT1, AtPOT1a, Protection of Telomeres 1a -0.163 -0.024
81 250006_at AT5G18660 PCB2, PALE-GREEN AND CHLOROPHYLL B REDUCED 2 -0.163 0.003
82 251128_at AT5G01110 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.162 -0.255
83 259700_at AT1G68980 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.162 -0.155
84 253410_at AT4G32970 unknown -0.158 0.023
85 248766_at AT5G47580 ASG7, ALTERED SEED GERMINATION 7 -0.157 -0.099
86 257891_at AT3G17170 RFC3, REGULATOR OF FATTY-ACID COMPOSITION 3 -0.157 -0.012
87 245730_at AT1G73470 unknown -0.155 0.004
88 266938_at AT2G18950 ATHPT, HOMOGENTISATE PHYTYLTRANSFERASE, HPT1, homogentisate phytyltransferase 1, TPT1, VTE2, VITAMIN E 2 -0.153 -0.133
89 248131_at AT5G54830 [DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein] -0.152 -0.230
90 253959_at AT4G26410 [Uncharacterised conserved protein UCP022280] -0.151 0.046
91 254669_at AT4G18370 DEG5, degradation of periplasmic proteins 5, DEGP5, DEGP PROTEASE 5, HHOA, PROTEASE HHOA PRECUSOR -0.147 0.007