4.0:Information of module
35S::HRE2 Hypoxic
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009081 branched-chain amino acid metabolic proc... BP 7.883e-03
GO:0005983 starch catabolic process BP 1.195e-02
GO:0009251 glucan catabolic process BP 1.195e-02
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0044281 small molecule metabolic process BP 3.573e-05
GO:0009069 serine family amino acid metabolic proce... BP 6.995e-05
GO:0044711 single-organism biosynthetic process BP 9.110e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
35S::HRE2 Hypoxic		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 249780_at AT5G24240 [Phosphatidylinositol 3- and 4-kinase ] 0.663 -0.008
2 245173_at AT2G47520 AtERF71, Arabidopsis thaliana ethylene response factor 71, ERF71, ethylene response factor 71, HRE2, HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 2 0.534 -0.030
3 259789_at AT1G29395 COR413-TM1, COLD REGULATED 314 THYLAKOID MEMBRANE 1, COR413IM1, COLD REGULATED 314 INNER MEMBRANE 1, COR414-TM1, cold regulated 414 thylakoid membrane 1 0.208 0.071
4 249726_at AT5G35480 unknown 0.163 0.047
5 247252_at AT5G64770 CLEL 9, CLE-like 9, GLV2, GOLVEN 2, RGF9, root meristem growth factor 9 0.160 0.123
6 251001_at AT5G02670 unknown 0.158 0.044
7 264271_at AT1G60270 BGLU6, beta glucosidase 6 0.155 0.014
8 249542_at AT5G38140 NF-YC12, nuclear factor Y, subunit C12 0.146 0.131
9 245440_at AT4G16680 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.138 0.019
10 263086_at AT2G16110 [pseudogene] 0.137 -0.197
11 266616_at AT2G29680 ATCDC6, CDC6, cell division control 6 0.137 -0.122
12 255219_at AT4G07720 [pseudogene] 0.136 -0.032
13 255419_at AT4G03230 [S-locus lectin protein kinase family protein] 0.123 0.122
14 264049_at AT2G22390 ATRABA4E, RABA4E, RAB GTPase homolog A4E 0.121 0.074
15 254377_at AT4G21650 [Subtilase family protein] 0.121 0.066
16 251228_at AT3G62710 [Glycosyl hydrolase family protein] 0.119 0.009
17 254427_at AT4G21190 emb1417, embryo defective 1417 0.119 0.007
18 248364_at AT5G52490 [Fibrillarin family protein] 0.116 -0.066
19 254304_at AT4G22270 ATMRB1, ARABIDOPSIS MEMBRANE RELATED BIGGER1, MRB1, MEMBRANE RELATED BIGGER1 0.116 -0.028
20 264940_at AT1G60470 AtGolS4, galactinol synthase 4, GolS4, galactinol synthase 4 0.114 -0.044
21 256676_at AT3G52180 ATPTPKIS1, ATSEX4, DSP4, DUAL-SPECIFICITY PROTEIN PHOSPHATASE 4, SEX4, STARCH-EXCESS 4 0.107 -0.002
22 260600_at AT1G55950 [DNA-binding storekeeper protein-related transcriptional regulator] 0.103 0.037
23 248029_at AT5G55700 BAM4, beta-amylase 4, BMY6, BETA-AMYLASE 6 0.102 0.114
24 256984_at AT3G13480 unknown 0.101 -0.197
25 245912_at AT5G19600 SULTR3;5, sulfate transporter 3;5 0.101 0.056
26 251221_at AT3G62550 [Adenine nucleotide alpha hydrolases-like superfamily protein] 0.100 0.474
27 258874_at AT3G03230 [alpha/beta-Hydrolases superfamily protein] 0.099 -0.324
28 261395_at AT1G79700 WRI4, WRINKLED 4 0.098 -0.051
29 256418_at AT3G06160 [AP2/B3-like transcriptional factor family protein] 0.097 0.039
30 266209_at AT2G27550 ATC, centroradialis -0.240 -0.158
31 263403_at AT2G04040 ATDTX1, DTX1, detoxification 1, TX1 -0.213 -0.032
32 250983_at AT5G02780 GSTL1, glutathione transferase lambda 1 -0.211 -0.051
33 249191_at AT5G42760 [Leucine carboxyl methyltransferase] -0.193 -0.011
34 252269_at AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 -0.181 -0.020
35 254818_at AT4G12470 AZI1, azelaic acid induced 1 -0.167 0.072
36 247657_at AT5G59845 [Gibberellin-regulated family protein] -0.159 -0.096
37 246850_at AT5G26860 LON1, lon protease 1, LON_ARA_ARA -0.156 0.040
38 247026_at AT5G67080 MAPKKK19, mitogen-activated protein kinase kinase kinase 19 -0.155 -0.050
39 250793_at AT5G05600 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.151 -0.007
40 248048_at AT5G56080 ATNAS2, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 2, NAS2, nicotianamine synthase 2 -0.144 0.116
41 265422_at AT2G20800 NDB4, NAD(P)H dehydrogenase B4 -0.141 -0.009
42 255648_at AT4G00910 [Aluminium activated malate transporter family protein] -0.139 0.049
43 245306_at AT4G14690 ELIP2, EARLY LIGHT-INDUCIBLE PROTEIN 2 -0.135 -0.104
44 260955_at AT1G06000 [UDP-Glycosyltransferase superfamily protein] -0.130 -0.017
45 244977_at ATCG00730 PETD, photosynthetic electron transfer D -0.129 0.210
46 249494_at AT5G39050 PMAT1, phenolic glucoside malonyltransferase 1 -0.128 -0.155
47 266668_at AT2G29760 OTP81, ORGANELLE TRANSCRIPT PROCESSING 81 -0.127 -0.013
48 253191_at AT4G35350 XCP1, xylem cysteine peptidase 1 -0.126 0.021
49 259562_at AT1G21200 [sequence-specific DNA binding transcription factors] -0.110 0.005
50 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 -0.107 0.037
51 258996_at AT3G01800 [Ribosome recycling factor] -0.107 -0.063
52 262081_at AT1G59540 ZCF125 -0.106 0.137
53 264809_at AT1G08830 CSD1, copper/zinc superoxide dismutase 1 -0.104 -0.099
54 258965_at AT3G10530 [Transducin/WD40 repeat-like superfamily protein] -0.103 -0.021
55 267463_at AT2G33845 [Nucleic acid-binding, OB-fold-like protein] -0.099 0.039
56 264184_at AT1G54790 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.098 -0.041
57 248846_at AT5G46500 unknown -0.095 0.000