4.0:Information of module
35S::HRE1 Hypoxic
In comparison with bri1-116 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0001666 response to hypoxia BP 1.304e-03
GO:0010087 phloem or xylem histogenesis BP 1.724e-03
GO:0036293 response to decreased oxygen levels BP 1.724e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0071229 cellular response to acid chemical BP 5.075e-05
GO:0012501 programmed cell death BP 1.605e-04
GO:0009753 response to jasmonic acid BP 1.684e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
35S::HRE1 Hypoxic		 Log2 signal ratio
bri1-116
1 253616_at AT4G30380 [Barwin-related endoglucanase] 0.576 0.048
2 249082_at AT5G44120 ATCRA1, CRUCIFERINA, CRA1, CRUCIFERINA, CRU1 0.570 -0.319
3 248125_at AT5G54740 SESA5, seed storage albumin 5 0.493 0.002
4 260451_at AT1G72360 AtERF73, ERF73, ethylene response factor 73, HRE1, HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 1 0.382 0.009
5 252896_at AT4G39480 CYP96A9, cytochrome P450, family 96, subfamily A, polypeptide 9 0.381 0.094
6 253060_at AT4G37710 [VQ motif-containing protein] 0.296 -0.040
7 251103_at AT5G01700 [Protein phosphatase 2C family protein] 0.266 -0.198
8 246310_at AT3G51895 AST12, SULTR3;1, sulfate transporter 3;1 0.256 -0.004
9 254232_at AT4G23600 CORI3, CORONATINE INDUCED 1, JR2, JASMONIC ACID RESPONSIVE 2 0.249 0.006
10 260716_at AT1G48130 ATPER1, 1-cysteine peroxiredoxin 1, PER1, 1-cysteine peroxiredoxin 1 0.224 -0.201
11 252838_at AT3G42090 [contains domain LIN-9 RELATED (PTHR21689)] 0.213 0.034
12 253301_at AT4G33720 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.204 0.101
13 253791_at AT4G28640 IAA11, indole-3-acetic acid inducible 11 0.194 0.078
14 260074_at AT1G73640 AtRABA6a, RAB GTPase homolog A6A, RABA6a, RAB GTPase homolog A6A 0.191 -0.296
15 264561_at AT1G55810 UKL3, uridine kinase-like 3 0.189 0.048
16 256081_at AT1G20700 ATWOX14, WUSCHEL RELATED HOMEOBOX 14, WOX14, WUSCHEL related homeobox 14 0.187 -0.019
17 262164_at AT1G78070 [Transducin/WD40 repeat-like superfamily protein] 0.178 -0.055
18 250920_at AT5G03390 unknown 0.174 -0.029
19 260364_at AT1G70560 CKRC1, cytokinin induced root curling 1, SAV3, SHADE AVOIDANCE 3, TAA1, tryptophan aminotransferase of Arabidopsis 1, WEI8, WEAK ETHYLENE INSENSITIVE 8 0.171 -0.203
20 247084_at AT5G66300 ANAC105, Arabidopsis NAC domain containing protein 105, NAC105, NAC domain containing protein 105, VND3, VASCULAR-RELATED NAC-DOMAIN 3 0.165 -0.022
21 267383_at AT2G44360 unknown 0.162 0.086
22 260632_at AT1G62360 BUM, BUMBERSHOOT, BUM1, BUMBERSHOOT 1, SHL, SHOOTLESS, STM, SHOOT MERISTEMLESS, WAM, WALDMEISTER, WAM1, WALDMEISTER 1 0.160 0.264
23 252421_at AT3G47540 [Chitinase family protein] 0.159 -0.027
24 256527_at AT1G66100 [Plant thionin] 0.156 0.050
25 250582_at AT5G07580 [Integrase-type DNA-binding superfamily protein] 0.155 -0.115
26 263231_at AT1G05680 UGT74E2, Uridine diphosphate glycosyltransferase 74E2 -0.324 -0.449
27 251428_at AT3G60140 BGLU30, BETA GLUCOSIDASE 30, DIN2, DARK INDUCIBLE 2, SRG2, SENESCENCE-RELATED GENE 2 -0.293 -0.025
28 263403_at AT2G04040 ATDTX1, DTX1, detoxification 1, TX1 -0.260 -0.351
29 258606_at AT3G02840 [ARM repeat superfamily protein] -0.252 -0.130
30 259428_at AT1G01560 ATMPK11, MAP kinase 11, MPK11, MAP kinase 11 -0.248 -0.036
31 250662_at AT5G07010 ATST2A, ARABIDOPSIS THALIANA SULFOTRANSFERASE 2A, ST2A, sulfotransferase 2A -0.241 0.069
32 266165_at AT2G28190 CSD2, copper/zinc superoxide dismutase 2, CZSOD2, COPPER/ZINC SUPEROXIDE DISMUTASE 2 -0.218 0.184
33 253046_at AT4G37370 CYP81D8, cytochrome P450, family 81, subfamily D, polypeptide 8 -0.213 -0.245
34 248921_at AT5G45950 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.197 -0.361
35 251054_at AT5G01540 LecRK-VI.2, L-type lectin receptor kinase-VI.2, LECRKA4.1, lectin receptor kinase a4.1 -0.183 0.034
36 256884_at AT3G15200 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.182 -0.041
37 244977_at ATCG00730 PETD, photosynthetic electron transfer D -0.176 0.135
38 248932_at AT5G46050 AtNPF5.2, ATPTR3, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 3, NPF5.2, NRT1/ PTR family 5.2, PTR3, peptide transporter 3 -0.175 0.141
39 245306_at AT4G14690 ELIP2, EARLY LIGHT-INDUCIBLE PROTEIN 2 -0.163 0.221
40 262381_at AT1G72900 [Toll-Interleukin-Resistance (TIR) domain-containing protein] -0.161 -0.186
41 255438_at AT4G03070 AOP, AOP1, AOP1.1 -0.158 -0.391
42 252989_at AT4G38420 sks9, SKU5 similar 9 -0.154 0.036
43 258299_at AT3G23410 ATFAO3, ARABIDOPSIS FATTY ALCOHOL OXIDASE 3, FAO3, fatty alcohol oxidase 3 -0.154 0.350
44 245008_at ATCG00360 YCF3 -0.151 0.042
45 245329_at AT4G14365 XBAT34, XB3 ortholog 4 in Arabidopsis thaliana -0.151 -0.203
46 262682_at AT1G75900 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.148 -0.575
47 256940_at AT3G30720 QQS, QUA-QUINE STARCH -0.147 0.007
48 255088_at AT4G09350 CRRJ, CHLORORESPIRATORY REDUCTION J, DJC75, DNA J protein C75, NdhT, NADH dehydrogenase-like complex T -0.145 0.163
49 250373_at AT5G11470 ASI1, ANTI-SILENCING 1, IBM2, Increase in Bonsai Methylation 2 -0.139 0.024