4.0:Information of module
4h pollen tube
In comparison with Shoot apex inflorescence (after bolting) help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009408 response to heat BP 1.385e-13
GO:0006950 response to stress BP 2.968e-12
GO:0009642 response to light intensity BP 3.082e-12
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009860 pollen tube growth BP 4.221e-05
GO:0009827 plant-type cell wall modification BP 9.587e-05
GO:0042545 cell wall modification BP 1.058e-04
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
4h pollen tube		 Log2 signal ratio
Shoot apex inflorescence (after bolting)
1 258279_at AT3G26870 [Plant self-incompatibility protein S1 family] 1.257 -0.858
2 249884_at AT5G22910 ATCHX9, ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 9, CHX9, cation/H+ exchanger 9 1.194 -0.957
3 250716_at AT5G06170 ATSUC9, sucrose-proton symporter 9, SUC9, sucrose-proton symporter 9 1.119 0.075
4 246608_at AT5G35380 [Protein kinase protein with adenine nucleotide alpha hydrolases-like domain] 1.067 -0.240
5 265904_at AT2G25630 BGLU14, beta glucosidase 14 1.057 -1.578
6 246096_at AT5G20330 BETAG4, beta-1,3-glucanase 4 1.056 -1.034
7 250331_at AT5G11820 [Plant self-incompatibility protein S1 family] 1.053 -0.655
8 258103_at AT3G23630 ATIPT7, ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 7, IPT7, isopentenyltransferase 7 1.050 -1.569
9 266590_at AT2G46240 ATBAG6, ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 6, BAG6, BCL-2-associated athanogene 6 1.014 -0.763
10 246560_at AT5G15560 unknown 1.013 -1.060
11 263469_at AT2G31910 ATCHX21, cation/H+ exchanger 21, CHX21, cation/H+ exchanger 21 1.010 -1.084
12 257597_at AT3G24790 [Protein kinase superfamily protein] 1.008 -1.340
13 249794_at AT5G23530 AtCXE18, carboxyesterase 18, CXE18, carboxyesterase 18 1.008 1.132
14 263935_at AT2G35930 AtPUB23, PUB23, plant U-box 23 1.007 -0.745
15 266294_at AT2G29500 [HSP20-like chaperones superfamily protein] 0.996 -0.905
16 250351_at AT5G12030 AT-HSP17.6A, heat shock protein 17.6A, HSP17.6, HEAT SHOCK PROTEIN 17.6, HSP17.6A, heat shock protein 17.6A 0.982 -0.430
17 245931_at AT5G09280 [Pectin lyase-like superfamily protein] 0.979 -1.180
18 257077_at AT3G19690 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.974 0.004
19 254403_at AT4G21323 [Subtilase family protein] 0.958 -0.432
20 251101_at AT5G01680 ATCHX26, ARABIDOPSIS THALIANA CATION/HYDROGEN EXCHANGER 26, CHX26, cation/H+ exchanger 26 0.947 -0.773
21 264706_at AT1G09720 NET2B, Networked 2B 0.947 -1.474
22 261714_at AT1G18510 TET16, tetraspanin 16 0.942 -0.900
23 250535_at AT5G08480 [VQ motif-containing protein] 0.934 -0.975
24 257995_at AT3G19940 [Major facilitator superfamily protein] 0.902 -0.187
25 258330_at AT3G16130 ATROPGEF13, PIRF2, phytochrome interacting RopGEF 2, ROPGEF13, ROP (rho of plants) guanine nucleotide exchange factor 13 0.895 -1.038
26 255993_at AT1G29770 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] 0.874 -1.100
27 248332_at AT5G52640 ATHS83, AtHsp90-1, HEAT SHOCK PROTEIN 90-1, ATHSP90.1, heat shock protein 90.1, HSP81-1, HEAT SHOCK PROTEIN 81-1, HSP81.1, HSP83, HEAT SHOCK PROTEIN 83, HSP90.1, heat shock protein 90.1 0.849 -0.048
28 267169_at AT2G37540 [NAD(P)-binding Rossmann-fold superfamily protein] 0.846 -0.161
29 267045_at AT2G34180 ATWL2, WPL4-LIKE 2, CIPK13, CBL-interacting protein kinase 13, SnRK3.7, SNF1-RELATED PROTEIN KINASE 3.7, WL2, WPL4-LIKE 2 0.828 -0.825
30 259064_at AT3G07490 AGD11, ARF-GAP domain 11, AtCML3, CML3, calmodulin-like 3 0.822 -1.135
31 261372_at AT1G53010 [RING/U-box superfamily protein] 0.818 -1.006
32 260978_at AT1G53540 [HSP20-like chaperones superfamily protein] 0.815 -0.957
33 253934_at AT4G26830 [O-Glycosyl hydrolases family 17 protein] 0.803 -0.935
34 254746_at AT4G12980 [Auxin-responsive family protein] 0.799 0.601
35 259866_at AT1G76640 CML39, CALMODULIN LIKE 39 0.792 -0.856
36 266492_at AT2G07020 [Protein kinase protein with adenine nucleotide alpha hydrolases-like domain] 0.790 -0.896
37 249725_at AT5G35470 unknown 0.780 -0.007
38 258266_at AT3G15860 unknown 0.779 -0.573
39 253246_at AT4G34600 unknown 0.776 -0.011
40 257528_at AT3G02125 unknown 0.757 -0.486
41 263150_at AT1G54050 [HSP20-like chaperones superfamily protein] 0.751 0.502
42 259821_at AT1G66220 [Subtilase family protein] 0.740 -0.310
43 251489_at AT3G59460 unknown 0.728 -1.035
44 254656_at AT4G18070 unknown 0.722 0.002
45 246336_at AT3G44900 ATCHX4, cation/H+ exchanger 4, CHX4, cation/H+ exchanger 4 0.713 -0.953
46 250296_at AT5G12020 HSP17.6II, 17.6 kDa class II heat shock protein 0.708 -0.088
47 252045_at AT3G52450 AtPUB22, PUB22, plant U-box 22 0.705 -0.746
48 251016_at AT5G02730 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.703 -0.683
49 248961_at AT5G45650 [subtilase family protein] 0.693 0.978
50 246118_at AT5G20340 BG5, beta-1,3-glucanase 5 0.690 -0.954
51 255610_at AT4G01190 ATPIPK10, phosphatidylinositol phosphate kinase 10, PIPK10, phosphatidylinositol phosphate kinase 10 0.689 -0.880
52 254294_at AT4G23070 ATRBL7, RHOMBOID-like protein 7, RBL7, RHOMBOID-like protein 7 0.688 -0.472
53 254104_at AT4G25040 [Uncharacterised protein family (UPF0497)] 0.682 -0.197
54 256681_at AT3G52340 ATSPP2, SUCROSE-PHOSPHATASE 2, SPP2, sucrose-6F-phosphate phosphohydrolase 2 0.678 0.453
55 246116_at AT5G20310 [Adenine nucleotide alpha hydrolases-like superfamily protein] 0.676 -0.423
56 254710_at AT4G18050 ABCB9, ATP-binding cassette B9, PGP9, P-glycoprotein 9 0.672 -0.443
57 258719_at AT3G09540 [Pectin lyase-like superfamily protein] 0.670 -0.780
58 251281_at AT3G61640 AGP20, arabinogalactan protein 20, AtAGP20, Arabinogalactan protein 20 0.664 0.119
59 255531_at AT4G02160 unknown 0.660 -1.041
60 246337_at AT3G44910 ATCHX12, CHX12, cation/H+ exchanger 12 0.651 -0.599
61 250781_at AT5G05410 DREB2, DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2, DREB2A, DRE-binding protein 2A 0.647 -0.733
62 254839_at AT4G12400 Hop3, Hop3 0.647 -0.369
63 249566_at AT5G38450 CYP735A1, cytochrome P450, family 735, subfamily A, polypeptide 1 0.644 0.100
64 248593_at AT5G49180 [Plant invertase/pectin methylesterase inhibitor superfamily] 0.642 -0.093
65 257349_at AT2G30630 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.641 -0.688
66 264219_at AT1G60420 AtNRX1, NRX1, nucleoredoxin 1 0.636 1.029
67 248045_at AT5G56030 AtHsp90.2, HEAT SHOCK PROTEIN 90.2, ERD8, EARLY-RESPONSIVE TO DEHYDRATION 8, HSP81-2, heat shock protein 81-2, HSP81.2, heat shock protein 81.2, HSP90.2, HEAT SHOCK PROTEIN 90.2 0.636 0.486
68 256633_at AT3G28340 GATL10, galacturonosyltransferase-like 10, GolS8, galactinol synthase 8 0.635 -0.698
69 248116_at AT5G55020 ATMYB120, MYB120, myb domain protein 120 0.634 -0.637
70 248434_at AT5G51440 [HSP20-like chaperones superfamily protein] 0.627 -0.730
71 250858_at AT5G04760 [Duplicated homeodomain-like superfamily protein] 0.624 0.020
72 253961_at AT4G26440 ATWRKY34, MSP3, MICROSPORE-SPECIFIC PROMOTER 3, WRKY34, WRKY DNA-binding protein 34 0.612 -1.308
73 258570_at AT3G04530 ATPPCK2, PEPCK2, PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2, PPCK2, phosphoenolpyruvate carboxylase kinase 2 0.595 -0.763
74 252315_at AT3G48690 ATCXE12, ARABIDOPSIS THALIANA CARBOXYESTERASE 12, CXE12 0.589 0.919
75 259793_at AT1G64380 [Integrase-type DNA-binding superfamily protein] 0.588 0.138
76 261838_at AT1G16030 Hsp70b, heat shock protein 70B 0.585 -0.782
77 266562_at AT2G23970 [Class I glutamine amidotransferase-like superfamily protein] 0.583 0.145
78 266200_at AT2G38920 [SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related] 0.580 -0.454
79 260227_at AT1G74450 unknown 0.580 -0.222
80 251791_at AT3G55500 ATEXP16, ATEXPA16, expansin A16, ATHEXP ALPHA 1.7, EXP16, EXPANSIN 16, EXPA16, expansin A16 0.579 -0.375
81 263757_at AT2G21430 [Papain family cysteine protease] 0.578 0.031
82 258133_at AT3G24500 ATMBF1C, MBF1C, multiprotein bridging factor 1C 0.574 0.141
83 247208_at AT5G64870 [SPFH/Band 7/PHB domain-containing membrane-associated protein family] 0.569 -0.048
84 245346_at AT4G17090 AtBAM3, BAM3, BETA-AMYLASE 3, BMY8, BETA-AMYLASE 8, CT-BMY, chloroplast beta-amylase 0.565 -0.409
85 260025_at AT1G30070 [SGS domain-containing protein] 0.565 0.118
86 267293_at AT2G23810 TET8, tetraspanin8 0.562 0.963
87 263304_at AT2G01920 [ENTH/VHS/GAT family protein] 0.556 -0.771
88 255808_at AT4G10280 [RmlC-like cupins superfamily protein] 0.554 0.640
89 254120_at AT4G24570 DIC2, dicarboxylate carrier 2 0.551 -0.240
90 267026_at AT2G38340 DREB19, dehydration response element-binding protein 19 0.548 -0.190
91 245189_at AT1G67670 unknown 0.543 -0.668
92 253046_at AT4G37370 CYP81D8, cytochrome P450, family 81, subfamily D, polypeptide 8 0.538 -0.744
93 255811_at AT4G10250 ATHSP22.0 0.534 -0.218
94 262318_at AT1G27620 [HXXXD-type acyl-transferase family protein] 0.532 -0.934
95 250279_at AT5G13200 [GRAM domain family protein] 0.532 -0.585
96 245803_at AT1G47128 RD21, responsive to dehydration 21, RD21A, responsive to dehydration 21A -0.811 0.554
97 259574_at AT1G35310 MLP168, MLP-like protein 168 -0.791 -0.504
98 266421_at AT2G38540 ATLTP1, ARABIDOPSIS THALIANA LIPID TRANSFER PROTEIN 1, LP1, lipid transfer protein 1, LTP1, LIPID TRANSFER PROTEIN 1 -0.778 0.937
99 248921_at AT5G45950 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.671 1.138
100 255795_at AT2G33380 AtCLO3, Arabidopsis thaliana caleosin 3, CLO-3, caleosin 3, CLO3, caleosin 3, RD20, RESPONSIVE TO DESSICATION 20 -0.529 0.160
101 262609_at AT1G13930 unknown -0.523 0.332
102 259660_at AT1G55260 LTPG6, glycosylphosphatidylinositol-anchored lipid protein transfer 6 -0.510 0.445
103 247717_at AT5G59320 LTP3, lipid transfer protein 3 -0.509 -0.040
104 257974_at AT3G20820 [Leucine-rich repeat (LRR) family protein] -0.496 0.658
105 256521_at AT1G66120 AAE11, acyl-activating enzyme 11, AtAAE11 -0.437 -0.408
106 260203_at AT1G52890 ANAC019, NAC domain containing protein 19, NAC019, NAC domain containing protein 19 -0.436 0.206
107 265755_at AT2G10630 [CACTA-like transposase family (En/Spm), has a 2.7e-97 P-value blast match to GB:BAA20532 ORF of transposon Tdc1 (CACTA-element) (Daucus carota)] -0.434 -0.846
108 248918_at AT5G45890 AtSAG12, SAG12, senescence-associated gene 12 -0.402 -1.176
109 257054_at AT3G15353 ATMT3, MT3, metallothionein 3 -0.383 0.583
110 247921_at AT5G57660 ATCOL5, BBX6, B-box domain protein 6, COL5, CONSTANS-like 5 -0.356 0.333
111 258402_at AT3G15450 [Aluminium induced protein with YGL and LRDR motifs] -0.338 0.991
112 253646_at AT4G29810 ATMKK2, MAP kinase kinase 2, MK1, MAP KINASE KINASE 1, MKK2, MAP kinase kinase 2 -0.335 0.122
113 260529_at AT2G47400 CP12, CP12 DOMAIN-CONTAINING PROTEIN 1, CP12-1, CP12 domain-containing protein 1 -0.334 0.499
114 263996_at AT2G22530 [Alkaline-phosphatase-like family protein] -0.314 -0.640
115 254186_at AT4G24010 ATCSLG1, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE G1, CSLG1, cellulose synthase like G1 -0.312 -0.670
116 255345_at AT4G04460 [Saposin-like aspartyl protease family protein] -0.308 -0.760
117 259570_at AT1G20440 AtCOR47, COR47, cold-regulated 47, RD17 -0.308 -0.335
118 259839_at AT1G52190 AtNPF1.2, NPF1.2, NRT1/ PTR family 1.2, NRT1.11, nitrate transporter 1.11 -0.303 1.423
119 246072_at AT5G20240 PI, PISTILLATA -0.301 0.350
120 265400_at AT2G10940 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.299 0.720
121 256772_at AT3G13750 BGAL1, beta galactosidase 1, BGAL1, beta-galactosidase 1 -0.295 0.048
122 248009_at AT5G56280 CSN6A, COP9 signalosome subunit 6A -0.277 1.243
123 264791_at AT2G17845 [NAD(P)-binding Rossmann-fold superfamily protein] -0.272 -1.483
124 261933_at AT1G22410 [Class-II DAHP synthetase family protein] -0.271 0.423
125 256544_at AT1G42560 ATMLO9, ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, MLO9, MILDEW RESISTANCE LOCUS O 9 -0.262 -1.113
126 252916_at AT4G38950 [ATP binding microtubule motor family protein] -0.262 -0.420
127 261277_at AT1G20230 [Pentatricopeptide repeat (PPR) superfamily protein] -0.261 -0.318
128 252430_at AT3G47470 CAB4, LHCA4, light-harvesting chlorophyll-protein complex I subunit A4 -0.251 0.596
129 247965_at AT5G56540 AGP14, arabinogalactan protein 14, ATAGP14 -0.249 0.436
130 256969_at AT3G21080 [ABC transporter-related] -0.248 -0.632
131 245518_at AT4G15850 ATRH1, RNA helicase 1, RH1, RNA helicase 1 -0.246 0.119
132 252297_at AT3G48930 EMB1080, embryo defective 1080 -0.241 0.393
133 252563_at AT3G45970 ATEXLA1, expansin-like A1, ATEXPL1, ATHEXP BETA 2.1, EXLA1, expansin-like A1, EXPL1, EXPANSIN L1 -0.241 0.031
134 248193_at AT5G54080 AtHGO, HGO, homogentisate 1,2-dioxygenase -0.240 -0.046
135 247822_at AT5G58440 SNX2a, sorting nexin 2A -0.240 1.121
136 251944_at AT3G53510 ABCG20, ATP-binding cassette G20 -0.235 -0.609
137 246464_at AT5G16980 [Zinc-binding dehydrogenase family protein] -0.232 -1.000
138 262860_at AT1G64810 APO1, ACCUMULATION OF PHOTOSYSTEM ONE 1 -0.228 0.501
139 266800_at AT2G22880 [VQ motif-containing protein] -0.228 0.012
140 249641_at AT5G36950 DEG10, degradation of periplasmic proteins 10, DegP10, DegP protease 10 -0.226 0.992
141 259516_at AT1G20450 ERD10, EARLY RESPONSIVE TO DEHYDRATION 10, LTI29, LOW TEMPERATURE INDUCED 29, LTI45, LOW TEMPERATURE INDUCED 45 -0.226 0.371
142 252077_at AT3G51720 unknown -0.224 0.756
143 250851_at AT5G04420 [Galactose oxidase/kelch repeat superfamily protein] -0.223 -0.123
144 263804_at AT2G40270 [Protein kinase family protein] -0.222 -0.273
145 264343_at AT1G11850 unknown -0.222 0.706
146 253752_at AT4G28910 NINJA, novel interactor of JAZ -0.221 0.283
147 250874_at AT5G04010 [F-box family protein] -0.221 -0.710
148 250703_at AT5G06360 [Ribosomal protein S8e family protein] -0.220 0.681
149 264545_at AT1G55670 PSAG, photosystem I subunit G -0.220 0.828
150 257566_x_at AT3G29610 unknown -0.218 -0.185
151 256834_at AT3G22920 [Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein] -0.217 -1.031
152 249329_at AT5G40960 unknown -0.217 -0.033
153 247713_at AT5G59330 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.213 -0.805
154 250445_at AT5G10760 [Eukaryotic aspartyl protease family protein] -0.211 -0.686
155 263483_at AT2G04030 AtHsp90.5, HEAT SHOCK PROTEIN 90.5, AtHsp90C, CR88, EMB1956, EMBRYO DEFECTIVE 1956, Hsp88.1, HEAT SHOCK PROTEIN 88.1, HSP90.5, HEAT SHOCK PROTEIN 90.5 -0.210 1.603
156 263098_at AT2G16005 [MD-2-related lipid recognition domain-containing protein] -0.206 -0.859
157 252694_at AT3G43630 [Vacuolar iron transporter (VIT) family protein] -0.206 0.858
158 264891_at AT1G23200 [Plant invertase/pectin methylesterase inhibitor superfamily] -0.204 -0.309
159 262754_at AT1G16350 [Aldolase-type TIM barrel family protein] -0.202 0.874
160 248685_at AT5G48500 unknown -0.200 0.012
161 249397_at AT5G40230 UMAMIT37, Usually multiple acids move in and out Transporters 37 -0.199 0.089
162 256022_at AT1G58360 AAP1, amino acid permease 1, AtAAP1, NAT2, NEUTRAL AMINO ACID TRANSPORTER 2 -0.198 0.114
163 253872_at AT4G27410 ANAC072, Arabidopsis NAC domain containing protein 72, RD26, RESPONSIVE TO DESICCATION 26 -0.197 -0.537
164 251189_at AT3G62650 unknown -0.194 1.244
165 259892_at AT1G72610 ATGER1, A. THALIANA GERMIN-LIKE PROTEIN 1, GER1, germin-like protein 1, GLP1, GERMIN-LIKE PROTEIN 1 -0.192 1.249
166 245849_at AT5G13520 [peptidase M1 family protein] -0.190 0.436
167 262847_at AT1G14840 ATMAP70-4, microtubule-associated proteins 70-4, MAP70-4, microtubule-associated proteins 70-4 -0.187 0.150
168 266795_at AT2G03070 MED8, mediator subunit 8 -0.187 0.663
169 264260_at AT1G09210 AtCRT1b, CRT1b, calreticulin 1b -0.186 0.289
170 265284_at AT2G20230 [Tetraspanin family protein] -0.186 1.092
171 253336_at AT4G33250 ATTIF3K1, EIF3K, eukaryotic translation initiation factor 3K, TIF3K1 -0.185 1.162
172 262621_at AT1G06530 PMD2, peroxisomal and mitochondrial division factor 2 -0.185 0.860
173 255111_at AT4G08780 [Peroxidase superfamily protein] -0.183 -0.569
174 264652_at AT1G08920 ESL1, ERD (early response to dehydration) six-like 1 -0.183 -0.195
175 255252_at AT4G04990 unknown -0.181 -1.069
176 254218_at AT4G23740 [Leucine-rich repeat protein kinase family protein] -0.181 -0.007
177 249581_at AT5G37600 ATGLN1;1, ARABIDOPSIS GLUTAMINE SYNTHASE 1;1, ATGSR1, ARABIDOPSIS THALIANA GLUTAMINE SYNTHASE CLONE R1, GLN1;1, GLUTAMINE SYNTHASE 1;1, GSR 1, glutamine synthase clone R1 -0.181 0.941
178 262198_at AT1G53830 ATPME2, pectin methylesterase 2, PME2, pectin methylesterase 2 -0.181 -0.836
179 260876_at AT1G21460 AtSWEET1, SWEET1 -0.180 1.244
180 261711_at AT1G32700 [PLATZ transcription factor family protein] -0.180 -0.363
181 265341_at AT2G18360 [alpha/beta-Hydrolases superfamily protein] -0.179 -0.556
182 249493_at AT5G39080 [HXXXD-type acyl-transferase family protein] -0.177 -1.108
183 255827_at AT2G40600 [appr-1-p processing enzyme family protein] -0.176 0.274
184 257247_at AT3G24140 FMA, FAMA -0.173 -0.470
185 266356_at AT2G32300 UCC1, uclacyanin 1 -0.170 -1.097
186 247397_at AT5G62940 DOF5.6, DNA BINDING WITH ONE FINGER 5.6, HCA2, HIGH CAMBIAL ACTIVITY2 -0.170 -0.092
187 255982_at AT1G34000 OHP2, one-helix protein 2 -0.169 1.259
188 251870_at AT3G54510 [Early-responsive to dehydration stress protein (ERD4)] -0.168 0.169
189 250201_at AT5G14230 unknown -0.167 0.736